RNA–Protein interactions for RNA: ENST00000368884.7

PSMD4-202, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD4, Length 1,350 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-202ENST00000368884 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
PSMD4-202ENST00000368884 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
PSMD4-202ENST00000368884 COL5A2P05997 1499 aaPredicted RBP16.59■□□□□ 0.25
PSMD4-202ENST00000368884 RGPD5Q99666 1765 aa16.59■□□□□ 0.25
PSMD4-202ENST00000368884 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
PSMD4-202ENST00000368884 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.25
PSMD4-202ENST00000368884 ABCC6O95255 1503 aa16.58■□□□□ 0.25
PSMD4-202ENST00000368884 RGS12O14924 1447 aa16.58■□□□□ 0.24
PSMD4-202ENST00000368884 LARP1Q6PKG0 1096 aaKnown RBP16.57■□□□□ 0.24
PSMD4-202ENST00000368884 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
PSMD4-202ENST00000368884 NSD2O96028 1365 aa16.57■□□□□ 0.24
PSMD4-202ENST00000368884 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
PSMD4-202ENST00000368884 SPATA31A5Q5VU36 1347 aa16.56■□□□□ 0.24
PSMD4-202ENST00000368884 SPATA31A7Q8IWB4 1347 aa16.56■□□□□ 0.24
PSMD4-202ENST00000368884 AMPHP49418 695 aa16.55■□□□□ 0.24
PSMD4-202ENST00000368884 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
PSMD4-202ENST00000368884 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
PSMD4-202ENST00000368884 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
PSMD4-202ENST00000368884 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
PSMD4-202ENST00000368884 CRB1P82279 1406 aa16.54■□□□□ 0.24
PSMD4-202ENST00000368884 WDR17Q8IZU2 1322 aa16.53■□□□□ 0.24
PSMD4-202ENST00000368884 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
PSMD4-202ENST00000368884 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
PSMD4-202ENST00000368884 TOM1L2Q6ZVM7 507 aa16.53■□□□□ 0.24
PSMD4-202ENST00000368884 IP6K1Q92551 441 aa16.53■□□□□ 0.24
PSMD4-202ENST00000368884 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
PSMD4-202ENST00000368884 RTL1A6NKG5 1358 aa16.53■□□□□ 0.24
PSMD4-202ENST00000368884 A0A0G2JS52 829 aa16.52■□□□□ 0.24
PSMD4-202ENST00000368884 HOXC9P31274 260 aa16.52■□□□□ 0.24
PSMD4-202ENST00000368884 MYT1Q01538 1121 aa16.52■□□□□ 0.24
PSMD4-202ENST00000368884 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
PSMD4-202ENST00000368884 MORC1Q86VD1 984 aa16.52■□□□□ 0.24
PSMD4-202ENST00000368884 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
PSMD4-202ENST00000368884 PEAK1Q9H792 1746 aa16.51■□□□□ 0.23
PSMD4-202ENST00000368884 ERBB3P21860 1342 aa16.51■□□□□ 0.23
PSMD4-202ENST00000368884 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
PSMD4-202ENST00000368884 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
PSMD4-202ENST00000368884 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
PSMD4-202ENST00000368884 TCP11L2Q8N4U5 519 aa16.51■□□□□ 0.23
PSMD4-202ENST00000368884 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
PSMD4-202ENST00000368884 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
PSMD4-202ENST00000368884 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
PSMD4-202ENST00000368884 ONECUT3O60422 494 aaPredicted RBP16.5■□□□□ 0.23
PSMD4-202ENST00000368884 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
PSMD4-202ENST00000368884 FLT4P35916 1363 aa16.49■□□□□ 0.23
PSMD4-202ENST00000368884 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
PSMD4-202ENST00000368884 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
PSMD4-202ENST00000368884 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
PSMD4-202ENST00000368884 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
PSMD4-202ENST00000368884 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
PSMD4-202ENST00000368884 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
PSMD4-202ENST00000368884 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
PSMD4-202ENST00000368884 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
PSMD4-202ENST00000368884 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
PSMD4-202ENST00000368884 HSP90AB2PQ58FF8 381 aa16.47■□□□□ 0.23
PSMD4-202ENST00000368884 FAM208AQ9UK61 1670 aaKnown RBP16.47■□□□□ 0.23
PSMD4-202ENST00000368884 INSRP06213 1382 aa16.47■□□□□ 0.23
PSMD4-202ENST00000368884 SMG6Q86US8 1419 aaKnown RBP16.46■□□□□ 0.23
PSMD4-202ENST00000368884 SOCS7O14512 581 aa16.46■□□□□ 0.23
PSMD4-202ENST00000368884 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
PSMD4-202ENST00000368884 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
PSMD4-202ENST00000368884 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
PSMD4-202ENST00000368884 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
PSMD4-202ENST00000368884 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
PSMD4-202ENST00000368884 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
PSMD4-202ENST00000368884 DISP2A7MBM2 1401 aa16.41■□□□□ 0.22
PSMD4-202ENST00000368884 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
PSMD4-202ENST00000368884 NBPF6Q5VWK0 638 aa16.4■□□□□ 0.22
PSMD4-202ENST00000368884 NBPF4Q96M43 638 aa16.4■□□□□ 0.22
PSMD4-202ENST00000368884 LRRC37A3O60309 1634 aa16.4■□□□□ 0.22
PSMD4-202ENST00000368884 IL2RBP14784 551 aa16.39■□□□□ 0.21
PSMD4-202ENST00000368884 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
PSMD4-202ENST00000368884 USHBP1Q8N6Y0 703 aa16.39■□□□□ 0.21
PSMD4-202ENST00000368884 MTHFSP49914 203 aa16.38■□□□□ 0.21
PSMD4-202ENST00000368884 DDB1Q16531 1140 aa16.38■□□□□ 0.21
PSMD4-202ENST00000368884 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
PSMD4-202ENST00000368884 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
PSMD4-202ENST00000368884 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
PSMD4-202ENST00000368884 EXOC5O00471 708 aa16.36■□□□□ 0.21
PSMD4-202ENST00000368884 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
PSMD4-202ENST00000368884 EYA1Q99502 592 aa16.35■□□□□ 0.21
PSMD4-202ENST00000368884 MEGF6O75095 1541 aa16.34■□□□□ 0.21
PSMD4-202ENST00000368884 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
PSMD4-202ENST00000368884 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
PSMD4-202ENST00000368884 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
PSMD4-202ENST00000368884 PARD3Q8TEW0 1356 aa16.33■□□□□ 0.2
PSMD4-202ENST00000368884 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
PSMD4-202ENST00000368884 MARCH10Q8NA82 808 aaPredicted RBP16.32■□□□□ 0.2
PSMD4-202ENST00000368884 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
PSMD4-202ENST00000368884 OVOS2A0A0G2JMS6 1433 aa16.31■□□□□ 0.2
PSMD4-202ENST00000368884 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
PSMD4-202ENST00000368884 IL13P35225 146 aa16.31■□□□□ 0.2
PSMD4-202ENST00000368884 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
PSMD4-202ENST00000368884 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
PSMD4-202ENST00000368884 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
PSMD4-202ENST00000368884 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
PSMD4-202ENST00000368884 RGPD1P0DJD0 1748 aa16.29■□□□□ 0.2
PSMD4-202ENST00000368884 RALBP1Q15311 655 aa16.28■□□□□ 0.2
PSMD4-202ENST00000368884 DDX54Q8TDD1 881 aaKnown RBP16.28■□□□□ 0.2
PSMD4-202ENST00000368884 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms