RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
SNX27-201ENST00000368838 ABTB2Q8N961 1025 aa12.17□□□□□ -0.46
SNX27-201ENST00000368838 PUS7Q96PZ0 661 aaKnown RBP12.17□□□□□ -0.46
SNX27-201ENST00000368838 TESK2Q96S53 571 aa12.17□□□□□ -0.46
SNX27-201ENST00000368838 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
SNX27-201ENST00000368838 AKAP12Q02952 1782 aa12.17□□□□□ -0.46
SNX27-201ENST00000368838 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
SNX27-201ENST00000368838 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
SNX27-201ENST00000368838 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
SNX27-201ENST00000368838 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
SNX27-201ENST00000368838 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
SNX27-201ENST00000368838 SBF2Q86WG5 1849 aa12.15□□□□□ -0.46
SNX27-201ENST00000368838 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
SNX27-201ENST00000368838 BAG6P46379 1132 aa12.15□□□□□ -0.46
SNX27-201ENST00000368838 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 EVA1CP58658 441 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 CDCA8Q53HL2 280 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 LRP5O75197 1615 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 KIF7Q2M1P5 1343 aa12.14□□□□□ -0.47
SNX27-201ENST00000368838 LARP1Q6PKG0 1096 aaKnown RBP12.13□□□□□ -0.47
SNX27-201ENST00000368838 COL18A1P39060 1754 aa12.13□□□□□ -0.47
SNX27-201ENST00000368838 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
SNX27-201ENST00000368838 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
SNX27-201ENST00000368838 PARP4Q9UKK3 1724 aaKnown RBP12.13□□□□□ -0.47
SNX27-201ENST00000368838 C11orf95C9JLR9 678 aaPredicted RBP12.12□□□□□ -0.47
SNX27-201ENST00000368838 TRIM37O94972 964 aa12.12□□□□□ -0.47
SNX27-201ENST00000368838 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
SNX27-201ENST00000368838 RREB1Q92766 1687 aa12.12□□□□□ -0.47
SNX27-201ENST00000368838 CAPN15O75808 1086 aa12.11□□□□□ -0.47
SNX27-201ENST00000368838 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
SNX27-201ENST00000368838 SOX12O15370 315 aa12.11□□□□□ -0.47
SNX27-201ENST00000368838 TMF1P82094 1093 aa12.11□□□□□ -0.47
SNX27-201ENST00000368838 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
SNX27-201ENST00000368838 COL5A2P05997 1499 aaPredicted RBP12.1□□□□□ -0.47
SNX27-201ENST00000368838 USP19O94966 1318 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 KTN1Q86UP2 1357 aaKnown RBP12.1□□□□□ -0.47
SNX27-201ENST00000368838 MON2Q7Z3U7 1717 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 USP6P35125 1406 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 LTN1O94822 1766 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 GCP02774 474 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 NLRP6P59044 892 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
SNX27-201ENST00000368838 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
SNX27-201ENST00000368838 SLIT3O75094 1523 aa12.09□□□□□ -0.47
SNX27-201ENST00000368838 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
SNX27-201ENST00000368838 CPDO75976 1380 aa12.08□□□□□ -0.48
SNX27-201ENST00000368838 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
SNX27-201ENST00000368838 APBA3O96018 575 aa12.08□□□□□ -0.48
SNX27-201ENST00000368838 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
SNX27-201ENST00000368838 TCP11L2Q8N4U5 519 aa12.08□□□□□ -0.48
SNX27-201ENST00000368838 FAM196AQ6ZSG2 479 aa12.07□□□□□ -0.48
SNX27-201ENST00000368838 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
SNX27-201ENST00000368838 ABCB7O75027 752 aa12.06□□□□□ -0.48
SNX27-201ENST00000368838 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
SNX27-201ENST00000368838 MIER1Q8N108 512 aa12.06□□□□□ -0.48
SNX27-201ENST00000368838 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
SNX27-201ENST00000368838 DISP2A7MBM2 1401 aa12.05□□□□□ -0.48
SNX27-201ENST00000368838 CRB1P82279 1406 aa12.05□□□□□ -0.48
SNX27-201ENST00000368838 ANP32CO43423 234 aa12.04□□□□□ -0.48
SNX27-201ENST00000368838 TOM1L2Q6ZVM7 507 aa12.04□□□□□ -0.48
SNX27-201ENST00000368838 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
SNX27-201ENST00000368838 AXIN2Q9Y2T1 843 aa12.04□□□□□ -0.48
SNX27-201ENST00000368838 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
SNX27-201ENST00000368838 TTC21BQ7Z4L5 1316 aa12.03□□□□□ -0.48
SNX27-201ENST00000368838 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
SNX27-201ENST00000368838 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
SNX27-201ENST00000368838 NFAT5O94916 1531 aa12.02□□□□□ -0.49
SNX27-201ENST00000368838 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
SNX27-201ENST00000368838 AATKQ6ZMQ8 1374 aa12.02□□□□□ -0.49
SNX27-201ENST00000368838 PER1O15534 1290 aaPredicted RBP12.02□□□□□ -0.49
SNX27-201ENST00000368838 PTF1AQ7RTS3 328 aa12.02□□□□□ -0.49
SNX27-201ENST00000368838 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
SNX27-201ENST00000368838 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
SNX27-201ENST00000368838 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
SNX27-201ENST00000368838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.01□□□□□ -0.497e-6■■□□□ 11.5
SNX27-201ENST00000368838 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
SNX27-201ENST00000368838 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
SNX27-201ENST00000368838 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
SNX27-201ENST00000368838 CSB-PGBD3P0DP91 1061 aa12□□□□□ -0.49
SNX27-201ENST00000368838 DDB1Q16531 1140 aa12□□□□□ -0.49
SNX27-201ENST00000368838 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
SNX27-201ENST00000368838 THRAP3Q9Y2W1 955 aaKnown RBP12□□□□□ -0.49
SNX27-201ENST00000368838 USP54Q70EL1 1684 aa12□□□□□ -0.49
SNX27-201ENST00000368838 OVOS2A0A0G2JMS6 1433 aa11.99□□□□□ -0.49
SNX27-201ENST00000368838 OVOS2A0A0J9YW53 1432 aa11.99□□□□□ -0.49
SNX27-201ENST00000368838 OVOS2Q6IE36 1432 aa11.99□□□□□ -0.49
SNX27-201ENST00000368838 WDR17Q8IZU2 1322 aa11.99□□□□□ -0.49
SNX27-201ENST00000368838 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
SNX27-201ENST00000368838 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
SNX27-201ENST00000368838 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
SNX27-201ENST00000368838 PAXIP1Q6ZW49 1069 aaPredicted RBP11.98□□□□□ -0.49
SNX27-201ENST00000368838 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
SNX27-201ENST00000368838 NME9Q86XW9 330 aa11.98□□□□□ -0.49
SNX27-201ENST00000368838 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
SNX27-201ENST00000368838 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
SNX27-201ENST00000368838 RALBP1Q15311 655 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms