RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CRB1P82279 1406 aa14.03□□□□□ -0.16
TPM3-210ENST00000368530 SLIT3O75094 1523 aa14.02□□□□□ -0.16
TPM3-210ENST00000368530 NLRP6P59044 892 aa14.02□□□□□ -0.16
TPM3-210ENST00000368530 AXIN2Q9Y2T1 843 aa14.02□□□□□ -0.16
TPM3-210ENST00000368530 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
TPM3-210ENST00000368530 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
TPM3-210ENST00000368530 NUP188Q5SRE5 1749 aa14□□□□□ -0.17
TPM3-210ENST00000368530 PEAK1Q9H792 1746 aa14□□□□□ -0.17
TPM3-210ENST00000368530 COL18A1P39060 1754 aa13.99□□□□□ -0.17
TPM3-210ENST00000368530 ARHGEF25Q86VW2 580 aa13.99□□□□□ -0.17
TPM3-210ENST00000368530 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
TPM3-210ENST00000368530 C11orf95C9JLR9 678 aaPredicted RBP13.98□□□□□ -0.17
TPM3-210ENST00000368530 PLSCR1O15162 318 aa13.98□□□□□ -0.17
TPM3-210ENST00000368530 NBPF14Q5TI25 921 aa13.98□□□□□ -0.17
TPM3-210ENST00000368530 PIK3C2AO00443 1686 aa13.98□□□□□ -0.17
TPM3-210ENST00000368530 PROM2Q8N271 834 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 TTC21BQ7Z4L5 1316 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 EVC2Q86UK5 1308 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 WDR17Q8IZU2 1322 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 OVOS2A0A0J9YW53 1432 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 OVOS2Q6IE36 1432 aa13.97□□□□□ -0.17
TPM3-210ENST00000368530 ZBTB7CA1YPR0 619 aa13.96□□□□□ -0.17
TPM3-210ENST00000368530 DDB1Q16531 1140 aa13.96□□□□□ -0.17
TPM3-210ENST00000368530 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
TPM3-210ENST00000368530 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
TPM3-210ENST00000368530 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
TPM3-210ENST00000368530 BCL11BQ9C0K0 894 aaPredicted RBP13.95□□□□□ -0.18
TPM3-210ENST00000368530 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
TPM3-210ENST00000368530 BCL9O00512 1426 aa13.95□□□□□ -0.18
TPM3-210ENST00000368530 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
TPM3-210ENST00000368530 KCNQ2O43526 872 aa13.95□□□□□ -0.18
TPM3-210ENST00000368530 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
TPM3-210ENST00000368530 TRPM1Q7Z4N2 1603 aa13.94□□□□□ -0.18
TPM3-210ENST00000368530 SPON1Q9HCB6 807 aa13.94□□□□□ -0.18
TPM3-210ENST00000368530 KCNH5Q8NCM2 988 aa13.93□□□□□ -0.18
TPM3-210ENST00000368530 CARD10Q9BWT7 1032 aa13.93□□□□□ -0.18
TPM3-210ENST00000368530 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
TPM3-210ENST00000368530 SBF2Q86WG5 1849 aa13.93□□□□□ -0.18
TPM3-210ENST00000368530 CDCA7Q9BWT1 371 aaPredicted RBP13.92□□□□□ -0.18
TPM3-210ENST00000368530 TTC21AQ8NDW8 1320 aa13.92□□□□□ -0.18
TPM3-210ENST00000368530 NFAT5O94916 1531 aa13.91□□□□□ -0.18
TPM3-210ENST00000368530 RGPD3A6NKT7 1758 aaPredicted RBP13.91□□□□□ -0.18
TPM3-210ENST00000368530 RGPD4Q7Z3J3 1758 aa13.91□□□□□ -0.18
TPM3-210ENST00000368530 ROCK2O75116 1388 aaKnown RBP13.9□□□□□ -0.18
TPM3-210ENST00000368530 AKAP12Q02952 1782 aa13.89□□□□□ -0.19
TPM3-210ENST00000368530 SOX12O15370 315 aa13.89□□□□□ -0.19
TPM3-210ENST00000368530 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
TPM3-210ENST00000368530 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
TPM3-210ENST00000368530 CD163L1Q9NR16 1453 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 CASZ1Q86V15 1759 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 RGPD5Q99666 1765 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
TPM3-210ENST00000368530 WNK3Q9BYP7 1800 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
TPM3-210ENST00000368530 EXOC5O00471 708 aa13.87□□□□□ -0.19
TPM3-210ENST00000368530 PTGER2P43116 358 aa13.87□□□□□ -0.19
TPM3-210ENST00000368530 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
TPM3-210ENST00000368530 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
TPM3-210ENST00000368530 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
TPM3-210ENST00000368530 YY1P25490 414 aa13.86□□□□□ -0.19
TPM3-210ENST00000368530 PPP1R1BQ9UD71 204 aaPredicted RBP13.86□□□□□ -0.19
TPM3-210ENST00000368530 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
TPM3-210ENST00000368530 ABCC6O95255 1503 aa13.85□□□□□ -0.19
TPM3-210ENST00000368530 ERBB3P21860 1342 aa13.85□□□□□ -0.19
TPM3-210ENST00000368530 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
TPM3-210ENST00000368530 NME9Q86XW9 330 aa13.85□□□□□ -0.19
TPM3-210ENST00000368530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM3-210ENST00000368530 MIER1Q8N108 512 aa13.85□□□□□ -0.19
TPM3-210ENST00000368530 TNS2Q63HR2 1409 aa13.84□□□□□ -0.19
TPM3-210ENST00000368530 ZBTB7AO95365 584 aa13.84□□□□□ -0.19
TPM3-210ENST00000368530 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
TPM3-210ENST00000368530 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
TPM3-210ENST00000368530 MON2Q7Z3U7 1717 aa13.84□□□□□ -0.19
TPM3-210ENST00000368530 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
TPM3-210ENST00000368530 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
TPM3-210ENST00000368530 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
TPM3-210ENST00000368530 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
TPM3-210ENST00000368530 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
TPM3-210ENST00000368530 STK32BQ9NY57 414 aa13.81□□□□□ -0.2
TPM3-210ENST00000368530 IL2RBP14784 551 aa13.8□□□□□ -0.2
TPM3-210ENST00000368530 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
TPM3-210ENST00000368530 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
TPM3-210ENST00000368530 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
TPM3-210ENST00000368530 PUS7Q96PZ0 661 aaKnown RBP13.8□□□□□ -0.2
TPM3-210ENST00000368530 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
TPM3-210ENST00000368530 EDC4Q6P2E9 1401 aaKnown RBP13.79□□□□□ -0.2
TPM3-210ENST00000368530 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
TPM3-210ENST00000368530 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
TPM3-210ENST00000368530 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
TPM3-210ENST00000368530 MYOM1P52179 1685 aa13.78□□□□□ -0.2
TPM3-210ENST00000368530 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
TPM3-210ENST00000368530 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
TPM3-210ENST00000368530 PAPPAQ13219 1627 aa13.78□□□□□ -0.2
TPM3-210ENST00000368530 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
TPM3-210ENST00000368530 IP6K1Q92551 441 aa13.77□□□□□ -0.21
TPM3-210ENST00000368530 TESK2Q96S53 571 aa13.77□□□□□ -0.21
TPM3-210ENST00000368530 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms