RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 FAM198AQ9UFP1 575 aa5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 PNMA3Q9UL41 463 aa5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 NPHP4O75161 1426 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 PHLPP1O60346 1717 aa5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 PRELPP51888 382 aa5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 BRPF1P55201 1214 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 METTL3Q86U44 580 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 PXYLP1Q8TE99 480 aa5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 C8orf37Q96NL8 207 aa5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 TSR3Q9UJK0 312 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 CDK13Q14004 1512 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-205ENST00000368295 CAMTA1Q9Y6Y1 1673 aa5.34□□□□□ -1.56
ECHDC1-205ENST00000368295 DNMT1P26358 1616 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 R3HDM1Q15032 1099 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 PPP1R18Q6NYC8 613 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 TATDN2Q93075 761 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 KIAA1468Q9P260 1216 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 POLR1AO95602 1720 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 XIRP1Q702N8 1843 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 CLCN1P35523 988 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 TTLL12Q14166 644 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 FAM161AQ3B820 660 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 NUDT18Q6ZVK8 323 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 AFAP1Q8N556 730 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 PLCH2O75038 1416 aa5.33□□□□□ -1.56
ECHDC1-205ENST00000368295 SPATA31A6Q5VVP1 1343 aa5.32□□□□□ -1.56
ECHDC1-205ENST00000368295 UGGT2Q9NYU1 1516 aa5.32□□□□□ -1.56
ECHDC1-205ENST00000368295 DNAJB2P25686 324 aa5.32□□□□□ -1.56
ECHDC1-205ENST00000368295 EYA1Q99502 592 aa5.32□□□□□ -1.56
ECHDC1-205ENST00000368295 SYNMO15061 1565 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 COL16A1Q07092 1604 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 GIGYF1O75420 1035 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 ANKLE2Q86XL3 938 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 PARP9Q8IXQ6 854 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 ZFRQ96KR1 1074 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 DIP2CQ9Y2E4 1556 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 A2ML1A8K2U0 1454 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 MDM2Q00987 491 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 RSPH6AQ9H0K4 717 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 KDM4CQ9H3R0 1056 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 GPCPD1Q9NPB8 672 aa5.31□□□□□ -1.56
ECHDC1-205ENST00000368295 CARMIL1Q5VZK9 1371 aa5.3□□□□□ -1.56
ECHDC1-205ENST00000368295 BIVM-ERCC5R4GMW8 1640 aa5.3□□□□□ -1.56
ECHDC1-205ENST00000368295 RCCD1A6NED2 376 aa5.3□□□□□ -1.56
ECHDC1-205ENST00000368295 PUS7Q96PZ0 661 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-205ENST00000368295 CNTLNQ9NXG0 1405 aa5.3□□□□□ -1.56
ECHDC1-205ENST00000368295 C3orf80F5H4A9 247 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 SMAPO00193 183 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 GGCXP38435 758 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 NFX1Q12986 1120 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 FAM98CQ17RN3 349 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 GIGYF2Q6Y7W6 1299 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 TNS4Q8IZW8 715 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 PHOX2BQ99453 314 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 TMUB1Q9BVT8 246 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 GPBP1L1Q9HC44 474 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 TMEM94Q12767 1356 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 ABCC1P33527 1531 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 ABCA6Q8N139 1617 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 PDIA4P13667 645 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 CCDC125Q86Z20 511 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 ZMYND15Q9H091 742 aa5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 SEPT9Q9UHD8 586 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-205ENST00000368295 SLC4A3P48751 1232 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 TJAP1Q5JTD0 557 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 FBXO31Q5XUX0 539 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 TMEM134Q9H6X4 195 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 IL21Q9HBE4 155 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 HPS5Q9UPZ3 1129 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 BLMP54132 1417 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 AGLP35573 1532 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 NWD1Q149M9 1564 aa5.28□□□□□ -1.56
ECHDC1-205ENST00000368295 PRR20EP86478 221 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 PRR20CP86479 221 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 PRR20DP86480 221 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 PRR20BP86481 221 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 PRR20AP86496 221 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 NLRP7Q8WX94 980 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 CHMP4AQ9BY43 222 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 RTEL1-TNFRSF6BF6WH68 1400 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 IQGAP1P46940 1657 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 HDGFP51858 240 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 CLTCQ00610 1675 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 SULF1Q8IWU6 871 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 ADGBQ8N7X0 1667 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 DDRGK1Q96HY6 314 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 LRCH3Q96II8 777 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 NGLY1Q96IV0 654 aa5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 SCAF11Q99590 1463 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 FAM217BQ9NTX9 383 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-205ENST00000368295 CFAP74Q9C0B2 1584 aa5.26□□□□□ -1.57
ECHDC1-205ENST00000368295 MED14O60244 1454 aa5.26□□□□□ -1.57
ECHDC1-205ENST00000368295 IGSF3O75054 1194 aa5.26□□□□□ -1.57
ECHDC1-205ENST00000368295 ADAMTS2O95450 1211 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms