RNA–Protein interactions for RNA: ENST00000368206.5

HDGF-202, Transcript of heparin binding growth factor, humanhuman

TSL 5 BASIC

Gene HDGF, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-202ENST00000368206 COL5A2P05997 1499 aaPredicted RBP18.39■□□□□ 0.54
HDGF-202ENST00000368206 WDR17Q8IZU2 1322 aa18.38■□□□□ 0.53
HDGF-202ENST00000368206 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
HDGF-202ENST00000368206 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
HDGF-202ENST00000368206 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
HDGF-202ENST00000368206 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
HDGF-202ENST00000368206 TRIM37O94972 964 aa18.37■□□□□ 0.53
HDGF-202ENST00000368206 A0A1W2PP64 1363 aa18.37■□□□□ 0.53
HDGF-202ENST00000368206 CDCA7Q9BWT1 371 aaPredicted RBP18.36■□□□□ 0.53
HDGF-202ENST00000368206 CD163L1Q9NR16 1453 aa18.36■□□□□ 0.53
HDGF-202ENST00000368206 THSD7AQ9UPZ6 1657 aa18.36■□□□□ 0.53
HDGF-202ENST00000368206 EN1Q05925 392 aaPredicted RBP18.35■□□□□ 0.53
HDGF-202ENST00000368206 DDB1Q16531 1140 aa18.35■□□□□ 0.53
HDGF-202ENST00000368206 COG3Q96JB2 828 aa18.35■□□□□ 0.53
HDGF-202ENST00000368206 CARD10Q9BWT7 1032 aa18.35■□□□□ 0.53
HDGF-202ENST00000368206 APBA3O96018 575 aa18.34■□□□□ 0.53
HDGF-202ENST00000368206 MON2Q7Z3U7 1717 aa18.34■□□□□ 0.53
HDGF-202ENST00000368206 EP400Q96L91 3159 aa18.33■□□□□ 0.53
HDGF-202ENST00000368206 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
HDGF-202ENST00000368206 EXOC5O00471 708 aa18.31■□□□□ 0.52
HDGF-202ENST00000368206 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
HDGF-202ENST00000368206 COL18A1P39060 1754 aa18.3■□□□□ 0.52
HDGF-202ENST00000368206 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
HDGF-202ENST00000368206 NFAT5O94916 1531 aa18.28■□□□□ 0.52
HDGF-202ENST00000368206 AMPHP49418 695 aa18.28■□□□□ 0.52
HDGF-202ENST00000368206 EZH2Q15910 746 aaKnown RBP18.28■□□□□ 0.52
HDGF-202ENST00000368206 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
HDGF-202ENST00000368206 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
HDGF-202ENST00000368206 IP6K1Q92551 441 aa18.27■□□□□ 0.52
HDGF-202ENST00000368206 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
HDGF-202ENST00000368206 LTV1Q96GA3 475 aaPredicted RBP18.26■□□□□ 0.51
HDGF-202ENST00000368206 CAMKK2Q96RR4 588 aa18.26■□□□□ 0.51
HDGF-202ENST00000368206 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
HDGF-202ENST00000368206 ERBB3P21860 1342 aa18.25■□□□□ 0.51
HDGF-202ENST00000368206 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
HDGF-202ENST00000368206 FYB1O15117 783 aa18.25■□□□□ 0.51
HDGF-202ENST00000368206 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
HDGF-202ENST00000368206 OVOS2A0A0G2JMS6 1433 aa18.24■□□□□ 0.51
HDGF-202ENST00000368206 OVOS2A0A0J9YW53 1432 aa18.24■□□□□ 0.51
HDGF-202ENST00000368206 OVOS2Q6IE36 1432 aa18.24■□□□□ 0.51
HDGF-202ENST00000368206 ABCC6O95255 1503 aa18.24■□□□□ 0.51
HDGF-202ENST00000368206 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
HDGF-202ENST00000368206 PARP4Q9UKK3 1724 aaKnown RBP18.23■□□□□ 0.51
HDGF-202ENST00000368206 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
HDGF-202ENST00000368206 IL2RBP14784 551 aa18.23■□□□□ 0.51
HDGF-202ENST00000368206 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
HDGF-202ENST00000368206 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
HDGF-202ENST00000368206 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
HDGF-202ENST00000368206 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
HDGF-202ENST00000368206 MAP3K19Q56UN5 1328 aa18.22■□□□□ 0.51
HDGF-202ENST00000368206 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
HDGF-202ENST00000368206 FBLN1P23142 703 aa18.21■□□□□ 0.51
HDGF-202ENST00000368206 HOXC9P31274 260 aa18.2■□□□□ 0.5
HDGF-202ENST00000368206 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
HDGF-202ENST00000368206 LTN1O94822 1766 aa18.19■□□□□ 0.5
HDGF-202ENST00000368206 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
HDGF-202ENST00000368206 RRS1Q15050 365 aaKnown RBP18.19■□□□□ 0.5
HDGF-202ENST00000368206 PLSCR1O15162 318 aa18.18■□□□□ 0.5
HDGF-202ENST00000368206 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
HDGF-202ENST00000368206 TNS1Q9HBL0 1735 aaKnown RBP18.17■□□□□ 0.5
HDGF-202ENST00000368206 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
HDGF-202ENST00000368206 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
HDGF-202ENST00000368206 BCL9O00512 1426 aa18.15■□□□□ 0.5
HDGF-202ENST00000368206 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
HDGF-202ENST00000368206 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
HDGF-202ENST00000368206 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
HDGF-202ENST00000368206 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
HDGF-202ENST00000368206 RTL1A6NKG5 1358 aa18.13■□□□□ 0.49
HDGF-202ENST00000368206 TNS2Q63HR2 1409 aa18.13■□□□□ 0.49
HDGF-202ENST00000368206 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
HDGF-202ENST00000368206 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
HDGF-202ENST00000368206 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
HDGF-202ENST00000368206 KCNQ2O43526 872 aa18.11■□□□□ 0.49
HDGF-202ENST00000368206 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
HDGF-202ENST00000368206 ZCRB1Q8TBF4 217 aaKnown RBP18.11■□□□□ 0.49
HDGF-202ENST00000368206 RAPGEF4Q8WZA2 1011 aa18.11■□□□□ 0.49
HDGF-202ENST00000368206 PEAK1Q9H792 1746 aa18.11■□□□□ 0.49
HDGF-202ENST00000368206 WNK3Q9BYP7 1800 aa18.11■□□□□ 0.49
HDGF-202ENST00000368206 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
HDGF-202ENST00000368206 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
HDGF-202ENST00000368206 PANK3Q9H999 370 aa18.1■□□□□ 0.49
HDGF-202ENST00000368206 FLT4P35916 1363 aa18.09■□□□□ 0.49
HDGF-202ENST00000368206 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
HDGF-202ENST00000368206 INSRP06213 1382 aa18.08■□□□□ 0.49
HDGF-202ENST00000368206 SBF2Q86WG5 1849 aa18.08■□□□□ 0.48
HDGF-202ENST00000368206 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
HDGF-202ENST00000368206 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
HDGF-202ENST00000368206 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
HDGF-202ENST00000368206 EMILIN1Q9Y6C2 1016 aa18.07■□□□□ 0.48
HDGF-202ENST00000368206 KIF20BQ96Q89 1820 aa18.07■□□□□ 0.48
HDGF-202ENST00000368206 TNNT2P45379 298 aaPredicted RBP18.06■□□□□ 0.48
HDGF-202ENST00000368206 PROM2Q8N271 834 aa18.06■□□□□ 0.48
HDGF-202ENST00000368206 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
HDGF-202ENST00000368206 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
HDGF-202ENST00000368206 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
HDGF-202ENST00000368206 MYOM1P52179 1685 aa18.05■□□□□ 0.48
HDGF-202ENST00000368206 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
HDGF-202ENST00000368206 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
HDGF-202ENST00000368206 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
HDGF-202ENST00000368206 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms