RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
SF3B5-201ENST00000367569 LTN1O94822 1766 aa20.51■□□□□ 0.87
SF3B5-201ENST00000367569 DISP2A7MBM2 1401 aa20.51■□□□□ 0.87
SF3B5-201ENST00000367569 PDE3BQ13370 1112 aa20.5■□□□□ 0.87
SF3B5-201ENST00000367569 EZH2Q15910 746 aaKnown RBP20.5■□□□□ 0.87
SF3B5-201ENST00000367569 NME9Q86XW9 330 aa20.5■□□□□ 0.87
SF3B5-201ENST00000367569 HDGFL2Q7Z4V5 671 aaPredicted RBP20.49■□□□□ 0.87
SF3B5-201ENST00000367569 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
SF3B5-201ENST00000367569 EIF4G2P78344 907 aaKnown RBP eCLIP20.48■□□□□ 0.87
SF3B5-201ENST00000367569 CAMKK2Q96RR4 588 aa20.48■□□□□ 0.87
SF3B5-201ENST00000367569 ZNF692Q9BU19 519 aaPredicted RBP20.48■□□□□ 0.87
SF3B5-201ENST00000367569 THRAP3Q9Y2W1 955 aaKnown RBP20.48■□□□□ 0.87
SF3B5-201ENST00000367569 NFAT5O94916 1531 aa20.48■□□□□ 0.87
SF3B5-201ENST00000367569 AATKQ6ZMQ8 1374 aa20.47■□□□□ 0.87
SF3B5-201ENST00000367569 COL18A1P39060 1754 aa20.46■□□□□ 0.87
SF3B5-201ENST00000367569 CRB1P82279 1406 aa20.46■□□□□ 0.87
SF3B5-201ENST00000367569 APBA3O96018 575 aa20.46■□□□□ 0.87
SF3B5-201ENST00000367569 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
SF3B5-201ENST00000367569 TTC21AQ8NDW8 1320 aa20.46■□□□□ 0.87
SF3B5-201ENST00000367569 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
SF3B5-201ENST00000367569 AXIN2Q9Y2T1 843 aa20.45■□□□□ 0.86
SF3B5-201ENST00000367569 LRP5O75197 1615 aa20.45■□□□□ 0.86
SF3B5-201ENST00000367569 ANKRD36BQ8N2N9 1353 aa20.45■□□□□ 0.86
SF3B5-201ENST00000367569 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
SF3B5-201ENST00000367569 R3HDM1Q15032 1099 aaKnown RBP20.44■□□□□ 0.86
SF3B5-201ENST00000367569 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
SF3B5-201ENST00000367569 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
SF3B5-201ENST00000367569 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
SF3B5-201ENST00000367569 OVOS2A0A0J9YW53 1432 aa20.42■□□□□ 0.86
SF3B5-201ENST00000367569 OVOS2Q6IE36 1432 aa20.42■□□□□ 0.86
SF3B5-201ENST00000367569 KCNH5Q8NCM2 988 aa20.41■□□□□ 0.86
SF3B5-201ENST00000367569 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
SF3B5-201ENST00000367569 WNK3Q9BYP7 1800 aa20.39■□□□□ 0.86
SF3B5-201ENST00000367569 PARD3Q8TEW0 1356 aa20.39■□□□□ 0.85
SF3B5-201ENST00000367569 WDR17Q8IZU2 1322 aa20.39■□□□□ 0.85
SF3B5-201ENST00000367569 CDCA8Q53HL2 280 aa20.39■□□□□ 0.85
SF3B5-201ENST00000367569 USP31Q70CQ4 1352 aa20.38■□□□□ 0.85
SF3B5-201ENST00000367569 SLC24A1O60721 1099 aa20.38■□□□□ 0.85
SF3B5-201ENST00000367569 PEAK1Q9H792 1746 aa20.38■□□□□ 0.85
SF3B5-201ENST00000367569 RREB1Q92766 1687 aa20.38■□□□□ 0.85
SF3B5-201ENST00000367569 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
SF3B5-201ENST00000367569 C11orf95C9JLR9 678 aaPredicted RBP20.37■□□□□ 0.85
SF3B5-201ENST00000367569 DDB1Q16531 1140 aa20.37■□□□□ 0.85
SF3B5-201ENST00000367569 NUP188Q5SRE5 1749 aa20.35■□□□□ 0.85
SF3B5-201ENST00000367569 ANKRD26Q9UPS8 1709 aa20.35■□□□□ 0.85
SF3B5-201ENST00000367569 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
SF3B5-201ENST00000367569 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
SF3B5-201ENST00000367569 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
SF3B5-201ENST00000367569 SBF2Q86WG5 1849 aa20.34■□□□□ 0.85
SF3B5-201ENST00000367569 FBLN1P23142 703 aa20.33■□□□□ 0.85
SF3B5-201ENST00000367569 CARD10Q9BWT7 1032 aa20.33■□□□□ 0.85
SF3B5-201ENST00000367569 CARD14Q9BXL6 1004 aa20.33■□□□□ 0.85
SF3B5-201ENST00000367569 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
SF3B5-201ENST00000367569 MARCH10Q8NA82 808 aaPredicted RBP20.32■□□□□ 0.84
SF3B5-201ENST00000367569 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
SF3B5-201ENST00000367569 CDCA7Q9BWT1 371 aaPredicted RBP20.31■□□□□ 0.84
SF3B5-201ENST00000367569 NBPF14Q5TI25 921 aa20.3■□□□□ 0.84
SF3B5-201ENST00000367569 COG3Q96JB2 828 aa20.3■□□□□ 0.84
SF3B5-201ENST00000367569 KIF7Q2M1P5 1343 aa20.29■□□□□ 0.84
SF3B5-201ENST00000367569 ABCC6O95255 1503 aa20.29■□□□□ 0.84
SF3B5-201ENST00000367569 FYB1O15117 783 aa20.28■□□□□ 0.84
SF3B5-201ENST00000367569 BCL11BQ9C0K0 894 aaPredicted RBP20.28■□□□□ 0.84
SF3B5-201ENST00000367569 CCDC7Q96M83 1385 aa20.27■□□□□ 0.84
SF3B5-201ENST00000367569 PLSCR1O15162 318 aa20.27■□□□□ 0.84
SF3B5-201ENST00000367569 EXOC5O00471 708 aa20.26■□□□□ 0.83
SF3B5-201ENST00000367569 BCL9O00512 1426 aa20.26■□□□□ 0.83
SF3B5-201ENST00000367569 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
SF3B5-201ENST00000367569 RGPD3A6NKT7 1758 aaPredicted RBP20.25■□□□□ 0.83
SF3B5-201ENST00000367569 RGPD4Q7Z3J3 1758 aa20.25■□□□□ 0.83
SF3B5-201ENST00000367569 ERBB3P21860 1342 aa20.25■□□□□ 0.83
SF3B5-201ENST00000367569 FAM208AQ9UK61 1670 aaKnown RBP20.24■□□□□ 0.83
SF3B5-201ENST00000367569 PANK3Q9H999 370 aa20.24■□□□□ 0.83
SF3B5-201ENST00000367569 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
SF3B5-201ENST00000367569 PROM2Q8N271 834 aa20.23■□□□□ 0.83
SF3B5-201ENST00000367569 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
SF3B5-201ENST00000367569 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
SF3B5-201ENST00000367569 LTV1Q96GA3 475 aaPredicted RBP20.22■□□□□ 0.83
SF3B5-201ENST00000367569 TNS2Q63HR2 1409 aa20.21■□□□□ 0.83
SF3B5-201ENST00000367569 ANKRD24Q8TF21 1146 aa20.21■□□□□ 0.83
SF3B5-201ENST00000367569 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
SF3B5-201ENST00000367569 CGNL1Q0VF96 1302 aa20.2■□□□□ 0.82
SF3B5-201ENST00000367569 WASHC2AQ641Q2 1341 aa20.2■□□□□ 0.82
SF3B5-201ENST00000367569 KCNQ2O43526 872 aa20.19■□□□□ 0.82
SF3B5-201ENST00000367569 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
SF3B5-201ENST00000367569 IL2RBP14784 551 aa20.18■□□□□ 0.82
SF3B5-201ENST00000367569 AMPHP49418 695 aa20.18■□□□□ 0.82
SF3B5-201ENST00000367569 HOXC9P31274 260 aa20.17■□□□□ 0.82
SF3B5-201ENST00000367569 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
SF3B5-201ENST00000367569 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
SF3B5-201ENST00000367569 TXNRD1Q16881 649 aa20.16■□□□□ 0.82
SF3B5-201ENST00000367569 IP6K1Q92551 441 aa20.16■□□□□ 0.82
SF3B5-201ENST00000367569 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
SF3B5-201ENST00000367569 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
SF3B5-201ENST00000367569 RTL1A6NKG5 1358 aa20.15■□□□□ 0.82
SF3B5-201ENST00000367569 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
SF3B5-201ENST00000367569 PDGFDQ9GZP0 370 aaPredicted RBP20.14■□□□□ 0.81
SF3B5-201ENST00000367569 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
SF3B5-201ENST00000367569 KAT6BQ8WYB5 2073 aa20.13■□□□□ 0.81
SF3B5-201ENST00000367569 CASZ1Q86V15 1759 aa20.13■□□□□ 0.81
SF3B5-201ENST00000367569 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms