RNA–Protein interactions for RNA: ENST00000366741.5

MRPL55-214, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-214ENST00000366741 COL18A1P39060 1754 aa20.26■□□□□ 0.83
MRPL55-214ENST00000366741 WDR17Q8IZU2 1322 aa20.26■□□□□ 0.83
MRPL55-214ENST00000366741 SOX12O15370 315 aa20.25■□□□□ 0.83
MRPL55-214ENST00000366741 CCDC125Q86Z20 511 aa20.25■□□□□ 0.83
MRPL55-214ENST00000366741 THSD7AQ9UPZ6 1657 aa20.24■□□□□ 0.83
MRPL55-214ENST00000366741 A0A0G2JS52 829 aa20.24■□□□□ 0.83
MRPL55-214ENST00000366741 FYB1O15117 783 aa20.24■□□□□ 0.83
MRPL55-214ENST00000366741 MYT1Q01538 1121 aa20.24■□□□□ 0.83
MRPL55-214ENST00000366741 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
MRPL55-214ENST00000366741 BLMP54132 1417 aaPredicted RBP20.23■□□□□ 0.83
MRPL55-214ENST00000366741 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
MRPL55-214ENST00000366741 AXIN2Q9Y2T1 843 aa20.22■□□□□ 0.83
MRPL55-214ENST00000366741 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
MRPL55-214ENST00000366741 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
MRPL55-214ENST00000366741 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
MRPL55-214ENST00000366741 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
MRPL55-214ENST00000366741 POLR3GLQ9BT43 218 aa20.2■□□□□ 0.82
MRPL55-214ENST00000366741 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
MRPL55-214ENST00000366741 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
MRPL55-214ENST00000366741 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
MRPL55-214ENST00000366741 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
MRPL55-214ENST00000366741 CSB-PGBD3P0DP91 1061 aa20.19■□□□□ 0.82
MRPL55-214ENST00000366741 IP6K1Q92551 441 aa20.19■□□□□ 0.82
MRPL55-214ENST00000366741 GGNBP2Q9H3C7 697 aa20.19■□□□□ 0.82
MRPL55-214ENST00000366741 ERBB3P21860 1342 aa20.19■□□□□ 0.82
MRPL55-214ENST00000366741 KIF24Q5T7B8 1368 aa20.19■□□□□ 0.82
MRPL55-214ENST00000366741 C11orf95C9JLR9 678 aaPredicted RBP20.18■□□□□ 0.82
MRPL55-214ENST00000366741 KIF20BQ96Q89 1820 aa20.16■□□□□ 0.82
MRPL55-214ENST00000366741 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
MRPL55-214ENST00000366741 NSD2O96028 1365 aa20.16■□□□□ 0.82
MRPL55-214ENST00000366741 LTN1O94822 1766 aa20.16■□□□□ 0.82
MRPL55-214ENST00000366741 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
MRPL55-214ENST00000366741 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
MRPL55-214ENST00000366741 AMPHP49418 695 aa20.14■□□□□ 0.81
MRPL55-214ENST00000366741 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
MRPL55-214ENST00000366741 PANK3Q9H999 370 aa20.14■□□□□ 0.81
MRPL55-214ENST00000366741 ANKRD24Q8TF21 1146 aa20.13■□□□□ 0.81
MRPL55-214ENST00000366741 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
MRPL55-214ENST00000366741 HOXC9P31274 260 aa20.12■□□□□ 0.81
MRPL55-214ENST00000366741 SF3B2Q13435 895 aaKnown RBP20.12■□□□□ 0.81
MRPL55-214ENST00000366741 FAM196AQ6ZSG2 479 aa20.12■□□□□ 0.81
MRPL55-214ENST00000366741 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
MRPL55-214ENST00000366741 FLT4P35916 1363 aa20.1■□□□□ 0.81
MRPL55-214ENST00000366741 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
MRPL55-214ENST00000366741 DDB1Q16531 1140 aa20.1■□□□□ 0.81
MRPL55-214ENST00000366741 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
MRPL55-214ENST00000366741 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
MRPL55-214ENST00000366741 RGPD5Q99666 1765 aa20.08■□□□□ 0.81
MRPL55-214ENST00000366741 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
MRPL55-214ENST00000366741 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
MRPL55-214ENST00000366741 INSRP06213 1382 aa20.08■□□□□ 0.8
MRPL55-214ENST00000366741 LRRC37A3O60309 1634 aa20.06■□□□□ 0.8
MRPL55-214ENST00000366741 OVOS2A0A0G2JMS6 1433 aa20.06■□□□□ 0.8
MRPL55-214ENST00000366741 BCL9O00512 1426 aa20.06■□□□□ 0.8
MRPL55-214ENST00000366741 EP400Q96L91 3159 aa20.06■□□□□ 0.8
MRPL55-214ENST00000366741 WNK3Q9BYP7 1800 aa20.06■□□□□ 0.8
MRPL55-214ENST00000366741 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
MRPL55-214ENST00000366741 IL2RBP14784 551 aa20.05■□□□□ 0.8
MRPL55-214ENST00000366741 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
MRPL55-214ENST00000366741 EXOC5O00471 708 aa20.04■□□□□ 0.8
MRPL55-214ENST00000366741 FBLN1P23142 703 aa20.04■□□□□ 0.8
MRPL55-214ENST00000366741 BAG6P46379 1132 aa20.04■□□□□ 0.8
MRPL55-214ENST00000366741 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
MRPL55-214ENST00000366741 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
MRPL55-214ENST00000366741 RGPD1P0DJD0 1748 aa20.02■□□□□ 0.79
MRPL55-214ENST00000366741 EMILIN1Q9Y6C2 1016 aa20.01■□□□□ 0.79
MRPL55-214ENST00000366741 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
MRPL55-214ENST00000366741 HSP90AB2PQ58FF8 381 aa20■□□□□ 0.79
MRPL55-214ENST00000366741 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
MRPL55-214ENST00000366741 FAM182BQ5T319 152 aa20■□□□□ 0.79
MRPL55-214ENST00000366741 POLKQ9UBT6 870 aa20■□□□□ 0.79
MRPL55-214ENST00000366741 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
MRPL55-214ENST00000366741 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
MRPL55-214ENST00000366741 MORC1Q86VD1 984 aa19.99■□□□□ 0.79
MRPL55-214ENST00000366741 PEAK1Q9H792 1746 aa19.99■□□□□ 0.79
MRPL55-214ENST00000366741 TRIM37O94972 964 aa19.97■□□□□ 0.79
MRPL55-214ENST00000366741 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
MRPL55-214ENST00000366741 PPM1GO15355 546 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-214ENST00000366741 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
MRPL55-214ENST00000366741 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
MRPL55-214ENST00000366741 PLEKHG2Q9H7P9 1386 aa19.95■□□□□ 0.79
MRPL55-214ENST00000366741 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
MRPL55-214ENST00000366741 DEFB132Q7Z7B7 95 aa19.95■□□□□ 0.78
MRPL55-214ENST00000366741 TNS1Q9HBL0 1735 aaKnown RBP19.94■□□□□ 0.78
MRPL55-214ENST00000366741 RAPGEF4Q8WZA2 1011 aa19.94■□□□□ 0.78
MRPL55-214ENST00000366741 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-214ENST00000366741 TNNT2P45379 298 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-214ENST00000366741 BCL11BQ9C0K0 894 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-214ENST00000366741 APBA3O96018 575 aa19.92■□□□□ 0.78
MRPL55-214ENST00000366741 TATP17735 454 aaPredicted RBP19.91■□□□□ 0.78
MRPL55-214ENST00000366741 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
MRPL55-214ENST00000366741 MEGF6O75095 1541 aa19.91■□□□□ 0.78
MRPL55-214ENST00000366741 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
MRPL55-214ENST00000366741 PLSCR1O15162 318 aa19.89■□□□□ 0.77
MRPL55-214ENST00000366741 EN1Q05925 392 aaPredicted RBP19.89■□□□□ 0.77
MRPL55-214ENST00000366741 CAMKK2Q96RR4 588 aa19.89■□□□□ 0.77
MRPL55-214ENST00000366741 EIF4A2Q14240 407 aaKnown RBP19.88■□□□□ 0.77
MRPL55-214ENST00000366741 USHBP1Q8N6Y0 703 aa19.87■□□□□ 0.77
MRPL55-214ENST00000366741 EYA1Q99502 592 aa19.87■□□□□ 0.77
MRPL55-214ENST00000366741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms