RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 NEO1Q92859 1461 aa10.89□□□□□ -0.67
NLRP3-204ENST00000366497 KCNH5Q8NCM2 988 aa10.89□□□□□ -0.67
NLRP3-204ENST00000366497 IL16Q14005 1332 aa10.89□□□□□ -0.67
NLRP3-204ENST00000366497 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
NLRP3-204ENST00000366497 MBIPQ9NS73 344 aa10.89□□□□□ -0.67
NLRP3-204ENST00000366497 YEATS2Q9ULM3 1422 aa10.89□□□□□ -0.67
NLRP3-204ENST00000366497 ZCCHC11Q5TAX3 1644 aaKnown RBP10.89□□□□□ -0.67
NLRP3-204ENST00000366497 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 KDM5CP41229 1560 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 RIMBP3CA6NJZ7 1639 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 RIMBP3BA6NNM3 1639 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 RIMBP3Q9UFD9 1639 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 SRCIN1Q9C0H9 1055 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 PTPRTO14522 1441 aa10.88□□□□□ -0.67
NLRP3-204ENST00000366497 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
NLRP3-204ENST00000366497 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
NLRP3-204ENST00000366497 RPAP2Q8IXW5 612 aaPredicted RBP10.87□□□□□ -0.67
NLRP3-204ENST00000366497 AEBP1Q8IUX7 1158 aa10.87□□□□□ -0.67
NLRP3-204ENST00000366497 CLASRPQ8N2M8 674 aaKnown RBP10.87□□□□□ -0.67
NLRP3-204ENST00000366497 PCDHB15Q9Y5E8 787 aa10.87□□□□□ -0.67
NLRP3-204ENST00000366497 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
NLRP3-204ENST00000366497 HSP90B1P14625 803 aaKnown RBP10.87□□□□□ -0.67
NLRP3-204ENST00000366497 TNNQ9UQP3 1299 aa10.87□□□□□ -0.67
NLRP3-204ENST00000366497 DMRT2Q9Y5R5 561 aa10.87□□□□□ -0.67
NLRP3-204ENST00000366497 UGGT1Q9NYU2 1555 aa10.87□□□□□ -0.67
NLRP3-204ENST00000366497 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 BTBD11A6QL63 1104 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 UBE2Q2Q8WVN8 375 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 MAGI2Q86UL8 1455 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 DNTTIP2Q5QJE6 756 aaKnown RBP10.86□□□□□ -0.67
NLRP3-204ENST00000366497 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 F6X3S4 739 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 ERC2O15083 957 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 STRN4Q9NRL3 753 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 KDM5DQ9BY66 1539 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
NLRP3-204ENST00000366497 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
NLRP3-204ENST00000366497 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
NLRP3-204ENST00000366497 RLBP1P12271 317 aa10.85□□□□□ -0.67
NLRP3-204ENST00000366497 ZKSCAN1P17029 563 aaPredicted RBP10.85□□□□□ -0.67
NLRP3-204ENST00000366497 GTF2E1P29083 439 aaPredicted RBP10.85□□□□□ -0.67
NLRP3-204ENST00000366497 EIF4A2Q14240 407 aaKnown RBP10.85□□□□□ -0.67
NLRP3-204ENST00000366497 PRDM11Q9NQV5 511 aa10.85□□□□□ -0.67
NLRP3-204ENST00000366497 LRRCC1Q9C099 1032 aa10.85□□□□□ -0.67
NLRP3-204ENST00000366497 EXOC6BQ9Y2D4 811 aa10.84□□□□□ -0.67
NLRP3-204ENST00000366497 TOM1L2Q6ZVM7 507 aa10.84□□□□□ -0.67
NLRP3-204ENST00000366497 SYAP1Q96A49 352 aaPredicted RBP10.84□□□□□ -0.67
NLRP3-204ENST00000366497 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
NLRP3-204ENST00000366497 TRPM2O94759 1503 aa10.84□□□□□ -0.67
NLRP3-204ENST00000366497 SBNO2Q9Y2G9 1366 aa10.84□□□□□ -0.67
NLRP3-204ENST00000366497 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
NLRP3-204ENST00000366497 SRGAP3O43295 1099 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 NAP1L5Q96NT1 182 aaPredicted RBP10.83□□□□□ -0.68
NLRP3-204ENST00000366497 SPG7Q9UQ90 795 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 MYL6BP14649 208 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 MPRIPQ6WCQ1 1025 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 DDX54Q8TDD1 881 aaKnown RBP10.83□□□□□ -0.68
NLRP3-204ENST00000366497 TMX4Q9H1E5 349 aaPredicted RBP10.83□□□□□ -0.68
NLRP3-204ENST00000366497 TTC21AQ8NDW8 1320 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 C8orf58Q8NAV2 365 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 IL1RAPL2Q9NP60 686 aa10.83□□□□□ -0.68
NLRP3-204ENST00000366497 CABP4P57796 275 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 GNL2Q13823 731 aaKnown RBP10.82□□□□□ -0.68
NLRP3-204ENST00000366497 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 ZFYVE16Q7Z3T8 1539 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-204ENST00000366497 KCNA6P17658 529 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 NEK4P51957 841 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 SKOR2Q2VWA4 1001 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-204ENST00000366497 CNTROBQ8N137 903 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 TSPYL6Q8N831 410 aa10.82□□□□□ -0.68
NLRP3-204ENST00000366497 RSPH6AQ9H0K4 717 aa10.81□□□□□ -0.68
NLRP3-204ENST00000366497 TBX22Q9Y458 520 aa10.81□□□□□ -0.68
NLRP3-204ENST00000366497 SMARCA5O60264 1052 aaPredicted RBP10.81□□□□□ -0.68
NLRP3-204ENST00000366497 MSNP26038 577 aaKnown RBP10.81□□□□□ -0.68
NLRP3-204ENST00000366497 NUCB2P80303 420 aa10.81□□□□□ -0.68
NLRP3-204ENST00000366497 ERVK-7P63135 1459 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 FLIIQ13045 1269 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 RABEP1Q15276 862 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 INSRP06213 1382 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 PRDM15P57071 1507 aaPredicted RBP10.8□□□□□ -0.68
NLRP3-204ENST00000366497 VAMP4O75379 141 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 AMOTQ4VCS5 1084 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 KRT28Q7Z3Y7 464 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 ARHGAP45Q92619 1136 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 SIL1Q9H173 461 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 ZMYM4Q5VZL5 1548 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 HTATSF1O43719 755 aaKnown RBP10.8□□□□□ -0.68
NLRP3-204ENST00000366497 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 TOMM22Q9NS69 142 aa10.8□□□□□ -0.68
NLRP3-204ENST00000366497 PLXNC1O60486 1568 aa10.79□□□□□ -0.68
NLRP3-204ENST00000366497 PTPRCP08575 1304 aa10.79□□□□□ -0.68
NLRP3-204ENST00000366497 ZFYVE9O95405 1425 aa10.79□□□□□ -0.68
NLRP3-204ENST00000366497 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
NLRP3-204ENST00000366497 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
NLRP3-204ENST00000366497 HDAC1Q13547 482 aaPredicted RBP10.79□□□□□ -0.68
NLRP3-204ENST00000366497 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
NLRP3-204ENST00000366497 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms