RNA–Protein interactions for RNA: ENST00000366170.6

VSTM1-202, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-202ENST00000366170 KIAA0232Q92628 1395 aa17.33■□□□□ 0.36
VSTM1-202ENST00000366170 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
VSTM1-202ENST00000366170 ADAMTS2O95450 1211 aa17.33■□□□□ 0.36
VSTM1-202ENST00000366170 LTV1Q96GA3 475 aaPredicted RBP17.33■□□□□ 0.36
VSTM1-202ENST00000366170 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
VSTM1-202ENST00000366170 CPDO75976 1380 aa17.32■□□□□ 0.36
VSTM1-202ENST00000366170 LTN1O94822 1766 aa17.32■□□□□ 0.36
VSTM1-202ENST00000366170 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
VSTM1-202ENST00000366170 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
VSTM1-202ENST00000366170 IL13P35225 146 aa17.31■□□□□ 0.36
VSTM1-202ENST00000366170 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
VSTM1-202ENST00000366170 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
VSTM1-202ENST00000366170 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
VSTM1-202ENST00000366170 COL22A1Q8NFW1 1626 aaPredicted RBP17.31■□□□□ 0.36
VSTM1-202ENST00000366170 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
VSTM1-202ENST00000366170 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
VSTM1-202ENST00000366170 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
VSTM1-202ENST00000366170 SPATA31A6Q5VVP1 1343 aa17.3■□□□□ 0.36
VSTM1-202ENST00000366170 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
VSTM1-202ENST00000366170 EVA1CP58658 441 aa17.29■□□□□ 0.36
VSTM1-202ENST00000366170 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
VSTM1-202ENST00000366170 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
VSTM1-202ENST00000366170 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
VSTM1-202ENST00000366170 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
VSTM1-202ENST00000366170 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
VSTM1-202ENST00000366170 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
VSTM1-202ENST00000366170 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
VSTM1-202ENST00000366170 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
VSTM1-202ENST00000366170 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
VSTM1-202ENST00000366170 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
VSTM1-202ENST00000366170 NGLY1Q96IV0 654 aa17.25■□□□□ 0.35
VSTM1-202ENST00000366170 EYA1Q99502 592 aa17.25■□□□□ 0.35
VSTM1-202ENST00000366170 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
VSTM1-202ENST00000366170 FCHSD2O94868 740 aa17.24■□□□□ 0.35
VSTM1-202ENST00000366170 HMOX1P09601 288 aa17.24■□□□□ 0.35
VSTM1-202ENST00000366170 STRN4Q9NRL3 753 aa17.24■□□□□ 0.35
VSTM1-202ENST00000366170 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
VSTM1-202ENST00000366170 COL18A1P39060 1754 aa17.23■□□□□ 0.35
VSTM1-202ENST00000366170 NEFMP07197 916 aa17.23■□□□□ 0.35
VSTM1-202ENST00000366170 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
VSTM1-202ENST00000366170 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
VSTM1-202ENST00000366170 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
VSTM1-202ENST00000366170 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
VSTM1-202ENST00000366170 ERBB3P21860 1342 aa17.21■□□□□ 0.35
VSTM1-202ENST00000366170 TOM1L2Q6ZVM7 507 aa17.21■□□□□ 0.35
VSTM1-202ENST00000366170 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
VSTM1-202ENST00000366170 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
VSTM1-202ENST00000366170 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
VSTM1-202ENST00000366170 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
VSTM1-202ENST00000366170 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
VSTM1-202ENST00000366170 ABCC6O95255 1503 aa17.2■□□□□ 0.34
VSTM1-202ENST00000366170 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
VSTM1-202ENST00000366170 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
VSTM1-202ENST00000366170 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
VSTM1-202ENST00000366170 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
VSTM1-202ENST00000366170 AEBP1Q8IUX7 1158 aa17.18■□□□□ 0.34
VSTM1-202ENST00000366170 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
VSTM1-202ENST00000366170 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
VSTM1-202ENST00000366170 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
VSTM1-202ENST00000366170 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
VSTM1-202ENST00000366170 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
VSTM1-202ENST00000366170 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
VSTM1-202ENST00000366170 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
VSTM1-202ENST00000366170 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
VSTM1-202ENST00000366170 APAF1O14727 1248 aa17.15■□□□□ 0.34
VSTM1-202ENST00000366170 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
VSTM1-202ENST00000366170 FNBP4Q8N3X1 1017 aaPredicted RBP17.15■□□□□ 0.34
VSTM1-202ENST00000366170 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
VSTM1-202ENST00000366170 USP21Q9UK80 565 aa17.15■□□□□ 0.34
VSTM1-202ENST00000366170 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
VSTM1-202ENST00000366170 LRP6O75581 1613 aa17.14■□□□□ 0.33
VSTM1-202ENST00000366170 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
VSTM1-202ENST00000366170 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.33
VSTM1-202ENST00000366170 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
VSTM1-202ENST00000366170 USP35Q9P2H5 1018 aa17.14■□□□□ 0.33
VSTM1-202ENST00000366170 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
VSTM1-202ENST00000366170 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
VSTM1-202ENST00000366170 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
VSTM1-202ENST00000366170 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
VSTM1-202ENST00000366170 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
VSTM1-202ENST00000366170 KDRP35968 1356 aa17.12■□□□□ 0.33
VSTM1-202ENST00000366170 CRB1P82279 1406 aa17.12■□□□□ 0.33
VSTM1-202ENST00000366170 SLIT2O94813 1529 aa17.11■□□□□ 0.33
VSTM1-202ENST00000366170 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
VSTM1-202ENST00000366170 FAM208AQ9UK61 1670 aaKnown RBP17.11■□□□□ 0.33
VSTM1-202ENST00000366170 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
VSTM1-202ENST00000366170 AFF2P51816 1311 aa17.11■□□□□ 0.33
VSTM1-202ENST00000366170 TMPOP42166 694 aaKnown RBP17.1■□□□□ 0.33
VSTM1-202ENST00000366170 RGS17Q9UGC6 210 aaPredicted RBP17.1■□□□□ 0.33
VSTM1-202ENST00000366170 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
VSTM1-202ENST00000366170 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
VSTM1-202ENST00000366170 IL2RBP14784 551 aa17.09■□□□□ 0.33
VSTM1-202ENST00000366170 RIPK4P57078 832 aa17.09■□□□□ 0.33
VSTM1-202ENST00000366170 VPS72Q15906 364 aa17.09■□□□□ 0.33
VSTM1-202ENST00000366170 AMOTQ4VCS5 1084 aa17.09■□□□□ 0.33
VSTM1-202ENST00000366170 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
VSTM1-202ENST00000366170 NFE2L2Q16236 605 aa17.08■□□□□ 0.32
VSTM1-202ENST00000366170 MTHFSDQ2M296 383 aaKnown RBP17.08■□□□□ 0.32
VSTM1-202ENST00000366170 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
VSTM1-202ENST00000366170 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms