RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SLC27A5Q9Y2P5 690 aa5.7□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ZC3H6P61129 1189 aaKnown RBP5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 COL19A1Q14993 1142 aa5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 PDXDC2PQ6P474 469 aa5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 TAS1R3Q7RTX0 852 aa5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 USB1Q9BQ65 265 aaKnown RBP5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 DNAAF2Q9NVR5 837 aaKnown RBP5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SEPT9Q9UHD8 586 aaPredicted RBP5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 NOD1Q9Y239 953 aa5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SALL2Q9Y467 1007 aaPredicted RBP5.69□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ACTN4O43707 911 aaKnown RBP5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ICMTO60725 284 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 PTPRNQ16849 979 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 TRAF7Q6Q0C0 670 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SAMD7Q7Z3H4 446 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 LAPTM4BQ86VI4 370 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ZSCAN29Q8IWY8 852 aaPredicted RBP5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ASB16Q96NS5 453 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 PRR14Q9BWN1 585 aa5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 CXXC1Q9P0U4 656 aaPredicted RBP5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 RBM19Q9Y4C8 960 aaKnown RBP5.68□□□□□ -1.5
RNU6-1249P-201ENST00000363237 FAM205CA6NFA0 338 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ABL1P00519 1130 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SEC13P55735 322 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SF3A1Q15459 793 aaKnown RBP5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 FBXO33Q7Z6M2 555 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 GLYCTKQ8IVS8 523 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SIX5Q8N196 739 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 DCTN4Q9UJW0 460 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 PCDHB9Q9Y5E1 797 aa5.67□□□□□ -1.5
RNU6-1249P-201ENST00000363237 H3BRB1 525 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 C21orf2O43822 256 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 RNF40O75150 1001 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 HOXB1P14653 301 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 MAPK1P28482 360 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 CTHP32929 405 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 CLDN10P78369 228 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 KCNH2Q12809 1159 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 PUS10Q3MIT2 529 aaKnown RBP5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ZNF594Q96JF6 807 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 TUT1Q9H6E5 874 aaKnown RBP5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 MAP10Q9P2G4 905 aa5.66□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ZBTB7BO15156 539 aaPredicted RBP5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 PRMT3O60678 531 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 DKK1O94907 266 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 JUNDP17535 347 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SCNN1AP37088 669 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 SF3B2Q13435 895 aaKnown RBP5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 OCLNQ16625 522 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 NBPF14Q5TI25 921 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 BRICD5Q6PL45 260 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 RNF19BQ6ZMZ0 732 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 UBXN4Q92575 508 aa5.65□□□□□ -1.5
RNU6-1249P-201ENST00000363237 ARHGAP33O14559 1287 aa5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 FMNL1O95466 1100 aaPredicted RBP5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 RECKO95980 971 aa5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 FKBP4Q02790 459 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 EAPPQ56P03 285 aaPredicted RBP5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 NAALADL2Q58DX5 795 aa5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 BLOC1S3Q6QNY0 202 aa5.64□□□□□ -1.51
RNU6-1249P-201ENST00000363237 PSEN2P49810 448 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 GTF2IP78347 998 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ZNF211Q13398 564 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 CCDC102BQ68D86 513 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 PRIMPOLQ96LW4 560 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 NBPF3Q9H094 633 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 EVA1BQ9NVM1 165 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 DOLKQ9UPQ8 538 aa5.63□□□□□ -1.51
RNU6-1249P-201ENST00000363237 PTCD1O75127 700 aaKnown RBP5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 CCNYL3P0C7X3 344 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 TSNAXIP1Q2TAA8 658 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ZBTB33Q86T24 672 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 RGL4Q8IZJ4 473 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ADAM32Q8TC27 787 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 GTF3C2Q8WUA4 911 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 SPATA32Q96LK8 384 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 OCSTAMPQ9BR26 566 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ARHGAP9Q9BRR9 750 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ANO2Q9NQ90 1003 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 KIAA1024Q9UPX6 916 aa5.62□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ERCC5P28715 1186 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ITGAEP38570 1179 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 FGD1P98174 961 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 TAGLNQ01995 201 aaKnown RBP5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ECM1Q16610 540 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 TSGA10IPQ3SY00 556 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 RNF20Q5VTR2 975 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 DZIP3Q86Y13 1208 aaKnown RBP5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 SCUBE3Q8IX30 993 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 THAP11Q96EK4 314 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ZFRQ96KR1 1074 aaKnown RBP5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 HINFPQ9BQA5 517 aa5.61□□□□□ -1.51
RNU6-1249P-201ENST00000363237 SFI1A8K8P3 1242 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 M0R2N6 131 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 SCAMP3O14828 347 aaKnown RBP5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 NR1I2O75469 434 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 ARHGAP4P98171 946 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 USP4Q13107 963 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 OXLD1Q5BKU9 147 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms