RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.34
CKLF-204ENST00000362093 COG3Q96JB2 828 aa23.45■■□□□ 1.34
CKLF-204ENST00000362093 GGNBP2Q9H3C7 697 aa23.42■■□□□ 1.34
CKLF-204ENST00000362093 BARGINQ6ZT62 677 aa23.41■■□□□ 1.34
CKLF-204ENST00000362093 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
CKLF-204ENST00000362093 TCP11L2Q8N4U5 519 aa23.4■■□□□ 1.34
CKLF-204ENST00000362093 THRAP3Q9Y2W1 955 aaKnown RBP23.4■■□□□ 1.34
CKLF-204ENST00000362093 NSD3Q9BZ95 1437 aa23.4■■□□□ 1.34
CKLF-204ENST00000362093 KRT27Q7Z3Y8 459 aa23.39■■□□□ 1.33
CKLF-204ENST00000362093 PANK3Q9H999 370 aa23.39■■□□□ 1.33
CKLF-204ENST00000362093 WDR17Q8IZU2 1322 aa23.38■■□□□ 1.33
CKLF-204ENST00000362093 FBLN1P23142 703 aa23.38■■□□□ 1.33
CKLF-204ENST00000362093 CRB1P82279 1406 aa23.38■■□□□ 1.33
CKLF-204ENST00000362093 ABCC6O95255 1503 aa23.38■■□□□ 1.33
CKLF-204ENST00000362093 A0A0G2JS52 829 aa23.37■■□□□ 1.33
CKLF-204ENST00000362093 MYT1Q01538 1121 aa23.37■■□□□ 1.33
CKLF-204ENST00000362093 TOM1L2Q6ZVM7 507 aa23.37■■□□□ 1.33
CKLF-204ENST00000362093 KIF7Q2M1P5 1343 aa23.36■■□□□ 1.33
CKLF-204ENST00000362093 BRWD3Q6RI45 1802 aa23.36■■□□□ 1.33
CKLF-204ENST00000362093 IP6K1Q92551 441 aa23.35■■□□□ 1.33
CKLF-204ENST00000362093 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
CKLF-204ENST00000362093 RGPD5Q99666 1765 aa23.35■■□□□ 1.33
CKLF-204ENST00000362093 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
CKLF-204ENST00000362093 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
CKLF-204ENST00000362093 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
CKLF-204ENST00000362093 CARD10Q9BWT7 1032 aa23.33■■□□□ 1.33
CKLF-204ENST00000362093 LTN1O94822 1766 aa23.32■■□□□ 1.32
CKLF-204ENST00000362093 ERBB3P21860 1342 aa23.31■■□□□ 1.32
CKLF-204ENST00000362093 HOXC9P31274 260 aa23.3■■□□□ 1.32
CKLF-204ENST00000362093 RRS1Q15050 365 aaKnown RBP23.3■■□□□ 1.32
CKLF-204ENST00000362093 CCDC125Q86Z20 511 aa23.3■■□□□ 1.32
CKLF-204ENST00000362093 ANKRD24Q8TF21 1146 aa23.3■■□□□ 1.32
CKLF-204ENST00000362093 KIF20BQ96Q89 1820 aa23.3■■□□□ 1.32
CKLF-204ENST00000362093 AMPHP49418 695 aa23.29■■□□□ 1.32
CKLF-204ENST00000362093 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
CKLF-204ENST00000362093 FAM182BQ5T319 152 aa23.26■■□□□ 1.31
CKLF-204ENST00000362093 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
CKLF-204ENST00000362093 CCDC7Q96M83 1385 aa23.26■■□□□ 1.31
CKLF-204ENST00000362093 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
CKLF-204ENST00000362093 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
CKLF-204ENST00000362093 WASHC2AQ641Q2 1341 aa23.25■■□□□ 1.31
CKLF-204ENST00000362093 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
CKLF-204ENST00000362093 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
CKLF-204ENST00000362093 EP400Q96L91 3159 aa23.22■■□□□ 1.31
CKLF-204ENST00000362093 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
CKLF-204ENST00000362093 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
CKLF-204ENST00000362093 KNSTRNQ9Y448 316 aa23.22■■□□□ 1.31
CKLF-204ENST00000362093 KIF24Q5T7B8 1368 aa23.22■■□□□ 1.31
CKLF-204ENST00000362093 DISP2A7MBM2 1401 aa23.22■■□□□ 1.31
CKLF-204ENST00000362093 DDB1Q16531 1140 aa23.21■■□□□ 1.31
CKLF-204ENST00000362093 EMILIN1Q9Y6C2 1016 aa23.21■■□□□ 1.31
CKLF-204ENST00000362093 PARP4Q9UKK3 1724 aaKnown RBP23.2■■□□□ 1.3
CKLF-204ENST00000362093 NSD2O96028 1365 aa23.2■■□□□ 1.3
CKLF-204ENST00000362093 HSP90AB2PQ58FF8 381 aa23.2■■□□□ 1.3
CKLF-204ENST00000362093 INSRP06213 1382 aa23.19■■□□□ 1.3
CKLF-204ENST00000362093 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
CKLF-204ENST00000362093 POLKQ9UBT6 870 aa23.19■■□□□ 1.3
CKLF-204ENST00000362093 FLT4P35916 1363 aa23.18■■□□□ 1.3
CKLF-204ENST00000362093 EXOC5O00471 708 aa23.18■■□□□ 1.3
CKLF-204ENST00000362093 IL2RBP14784 551 aa23.17■■□□□ 1.3
CKLF-204ENST00000362093 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
CKLF-204ENST00000362093 TNNT2P45379 298 aaPredicted RBP23.16■■□□□ 1.3
CKLF-204ENST00000362093 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
CKLF-204ENST00000362093 PPM1GO15355 546 aaPredicted RBP23.15■■□□□ 1.3
CKLF-204ENST00000362093 NBPF6Q5VWK0 638 aa23.15■■□□□ 1.3
CKLF-204ENST00000362093 MARCH10Q8NA82 808 aaPredicted RBP23.15■■□□□ 1.3
CKLF-204ENST00000362093 NBPF4Q96M43 638 aa23.15■■□□□ 1.3
CKLF-204ENST00000362093 ANKRD26Q9UPS8 1709 aa23.15■■□□□ 1.3
CKLF-204ENST00000362093 WNK3Q9BYP7 1800 aa23.15■■□□□ 1.3
CKLF-204ENST00000362093 MORC1Q86VD1 984 aa23.14■■□□□ 1.29
CKLF-204ENST00000362093 LRRC37A3O60309 1634 aa23.14■■□□□ 1.29
CKLF-204ENST00000362093 TRIM37O94972 964 aa23.13■■□□□ 1.29
CKLF-204ENST00000362093 DEFB132Q7Z7B7 95 aa23.13■■□□□ 1.29
CKLF-204ENST00000362093 FAM208AQ9UK61 1670 aaKnown RBP23.13■■□□□ 1.29
CKLF-204ENST00000362093 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
CKLF-204ENST00000362093 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
CKLF-204ENST00000362093 OVOS2A0A0G2JMS6 1433 aa23.09■■□□□ 1.29
CKLF-204ENST00000362093 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
CKLF-204ENST00000362093 BAG6P46379 1132 aa23.09■■□□□ 1.29
CKLF-204ENST00000362093 BCL9O00512 1426 aa23.08■■□□□ 1.29
CKLF-204ENST00000362093 TNS2Q63HR2 1409 aa23.08■■□□□ 1.29
CKLF-204ENST00000362093 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
CKLF-204ENST00000362093 NPC1L1Q9UHC9 1359 aa23.07■■□□□ 1.28
CKLF-204ENST00000362093 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
CKLF-204ENST00000362093 CC2D1BQ5T0F9 858 aaKnown RBP23.06■■□□□ 1.28
CKLF-204ENST00000362093 EYA1Q99502 592 aa23.05■■□□□ 1.28
CKLF-204ENST00000362093 RGPD1P0DJD0 1748 aa23.05■■□□□ 1.28
CKLF-204ENST00000362093 APBA3O96018 575 aa23.04■■□□□ 1.28
CKLF-204ENST00000362093 EN1Q05925 392 aaPredicted RBP23.04■■□□□ 1.28
CKLF-204ENST00000362093 EIF4A2Q14240 407 aaKnown RBP23.04■■□□□ 1.28
CKLF-204ENST00000362093 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
CKLF-204ENST00000362093 ZCRB1Q8TBF4 217 aaKnown RBP23.03■■□□□ 1.28
CKLF-204ENST00000362093 NCAPD2Q15021 1401 aa23.02■■□□□ 1.28
CKLF-204ENST00000362093 RAPGEF4Q8WZA2 1011 aa23.02■■□□□ 1.28
CKLF-204ENST00000362093 CAMKK2Q96RR4 588 aa23.02■■□□□ 1.28
CKLF-204ENST00000362093 BCL11BQ9C0K0 894 aaPredicted RBP23.02■■□□□ 1.28
CKLF-204ENST00000362093 MEGF6O75095 1541 aa23.02■■□□□ 1.28
CKLF-204ENST00000362093 TNS1Q9HBL0 1735 aaKnown RBP23.02■■□□□ 1.28
CKLF-204ENST00000362093 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
CKLF-204ENST00000362093 PTF1AQ7RTS3 328 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms