RNA–Protein interactions for RNA: ENST00000361762.3

PCDH7-201, Transcript of protocadherin 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH7, Length 6,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-201ENST00000361762 FYCO1Q9BQS8 1478 aa20.73■□□□□ 0.91
PCDH7-201ENST00000361762 PSMA5P28066 241 aa20.73■□□□□ 0.91
PCDH7-201ENST00000361762 CFTRP13569 1480 aa20.73■□□□□ 0.91
PCDH7-201ENST00000361762 RBM5P52756 815 aaKnown RBP eCLIP20.72■□□□□ 0.91
PCDH7-201ENST00000361762 RAPGEF3O95398 923 aa20.72■□□□□ 0.91
PCDH7-201ENST00000361762 CCDC112Q8NEF3 446 aa20.72■□□□□ 0.91
PCDH7-201ENST00000361762 LETM1O95202 739 aaPredicted RBP20.72■□□□□ 0.91
PCDH7-201ENST00000361762 BRPF1P55201 1214 aaPredicted RBP20.72■□□□□ 0.91
PCDH7-201ENST00000361762 NAT10Q9H0A0 1025 aaKnown RBP20.72■□□□□ 0.91
PCDH7-201ENST00000361762 XBP1P17861 261 aa20.72■□□□□ 0.91
PCDH7-201ENST00000361762 CCAR1Q8IX12 1150 aaKnown RBP20.71■□□□□ 0.91
PCDH7-201ENST00000361762 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.71■□□□□ 0.91
PCDH7-201ENST00000361762 GNAI3P08754 354 aa20.71■□□□□ 0.91
PCDH7-201ENST00000361762 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
PCDH7-201ENST00000361762 CDR1P51861 262 aa20.7■□□□□ 0.9
PCDH7-201ENST00000361762 PDCL2Q8N4E4 241 aa20.7■□□□□ 0.9
PCDH7-201ENST00000361762 SCAPERQ9BY12 1400 aa20.7■□□□□ 0.9
PCDH7-201ENST00000361762 GNAI2P04899 355 aa20.7■□□□□ 0.9
PCDH7-201ENST00000361762 SART3Q15020 963 aaKnown RBP20.7■□□□□ 0.9
PCDH7-201ENST00000361762 CCDC158Q5M9N0 1113 aa20.7■□□□□ 0.9
PCDH7-201ENST00000361762 FAM177A1Q8N128 213 aaPredicted RBP20.7■□□□□ 0.9
PCDH7-201ENST00000361762 ERCC4Q92889 916 aaPredicted RBP20.69■□□□□ 0.9
PCDH7-201ENST00000361762 CGNQ9P2M7 1197 aaKnown RBP20.69■□□□□ 0.9
PCDH7-201ENST00000361762 OFD1O75665 1012 aa20.68■□□□□ 0.9
PCDH7-201ENST00000361762 K7ELQ4 463 aaPredicted RBP20.68■□□□□ 0.9
PCDH7-201ENST00000361762 SF3B2Q13435 895 aaKnown RBP20.68■□□□□ 0.9
PCDH7-201ENST00000361762 CDK5RAP3Q96JB5 506 aa20.68■□□□□ 0.9
PCDH7-201ENST00000361762 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
PCDH7-201ENST00000361762 BRD4O60885 1362 aaPredicted RBP20.68■□□□□ 0.9
PCDH7-201ENST00000361762 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
PCDH7-201ENST00000361762 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
PCDH7-201ENST00000361762 ZC3H6P61129 1189 aaKnown RBP20.67■□□□□ 0.9
PCDH7-201ENST00000361762 PIBF1Q8WXW3 757 aa20.67■□□□□ 0.9
PCDH7-201ENST00000361762 RABEP1Q15276 862 aa20.67■□□□□ 0.9
PCDH7-201ENST00000361762 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
PCDH7-201ENST00000361762 ZSCAN30Q86W11 494 aa20.66■□□□□ 0.9
PCDH7-201ENST00000361762 NESP48681 1621 aa20.66■□□□□ 0.9
PCDH7-201ENST00000361762 NUP133Q8WUM0 1156 aa20.65■□□□□ 0.9
PCDH7-201ENST00000361762 DCTN1Q14203 1278 aa20.65■□□□□ 0.9
PCDH7-201ENST00000361762 KRT18P05783 430 aaKnown RBP20.64■□□□□ 0.9
PCDH7-201ENST00000361762 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.89
PCDH7-201ENST00000361762 IBSPP21815 317 aaPredicted RBP20.64■□□□□ 0.89
PCDH7-201ENST00000361762 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
PCDH7-201ENST00000361762 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
PCDH7-201ENST00000361762 CT47B1P0C2W7 299 aaPredicted RBP20.64■□□□□ 0.89
PCDH7-201ENST00000361762 THEMISQ8N1K5 641 aaPredicted RBP20.63■□□□□ 0.89
PCDH7-201ENST00000361762 ZHX3Q9H4I2 956 aa20.63■□□□□ 0.89
PCDH7-201ENST00000361762 KINO60870 393 aaKnown RBP20.63■□□□□ 0.89
PCDH7-201ENST00000361762 SYCE3A1L190 88 aa20.63■□□□□ 0.89
PCDH7-201ENST00000361762 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
PCDH7-201ENST00000361762 RTEL1-TNFRSF6BF6WH68 1400 aa20.62■□□□□ 0.89
PCDH7-201ENST00000361762 DEF6Q9H4E7 631 aa20.62■□□□□ 0.89
PCDH7-201ENST00000361762 SPG7Q9UQ90 795 aa20.62■□□□□ 0.89
PCDH7-201ENST00000361762 MPHOSPH8Q99549 860 aa20.62■□□□□ 0.89
PCDH7-201ENST00000361762 FAM193AP78312 1265 aa20.62■□□□□ 0.89
PCDH7-201ENST00000361762 CENPHQ9H3R5 247 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 KIAA0754O94854 1291 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 CCDC192P0DO97 292 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 NBPF8Q3BBV2 869 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 GNL3LQ9NVN8 582 aaKnown RBP20.61■□□□□ 0.89
PCDH7-201ENST00000361762 PDCL3Q9H2J4 239 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 TAF3Q5VWG9 929 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 PRDM11Q9NQV5 511 aa20.61■□□□□ 0.89
PCDH7-201ENST00000361762 AACSQ86V21 672 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 C11orf95C9JLR9 678 aaPredicted RBP20.6■□□□□ 0.89
PCDH7-201ENST00000361762 AAMPQ13685 434 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 CCDC57Q2TAC2 916 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 TNMDQ9H2S6 317 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
PCDH7-201ENST00000361762 IL1RAPL2Q9NP60 686 aa20.59■□□□□ 0.89
PCDH7-201ENST00000361762 ZSCAN29Q8IWY8 852 aaPredicted RBP20.59■□□□□ 0.89
PCDH7-201ENST00000361762 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
PCDH7-201ENST00000361762 RBM25P49756 843 aaKnown RBP20.59■□□□□ 0.89
PCDH7-201ENST00000361762 CCDC69A6NI79 296 aa20.58■□□□□ 0.89
PCDH7-201ENST00000361762 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
PCDH7-201ENST00000361762 GPATCH11Q8N954 259 aa20.58■□□□□ 0.89
PCDH7-201ENST00000361762 STK38Q15208 465 aa20.58■□□□□ 0.88
PCDH7-201ENST00000361762 SRCIN1Q9C0H9 1055 aa20.58■□□□□ 0.88
PCDH7-201ENST00000361762 SPDYE4A6NLX3 237 aa20.58■□□□□ 0.88
PCDH7-201ENST00000361762 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
PCDH7-201ENST00000361762 SERPINC1P01008 464 aa20.57■□□□□ 0.88
PCDH7-201ENST00000361762 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
PCDH7-201ENST00000361762 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
PCDH7-201ENST00000361762 MAGEC2Q9UBF1 373 aaPredicted RBP20.56■□□□□ 0.88
PCDH7-201ENST00000361762 HIP1O00291 1037 aa20.56■□□□□ 0.88
PCDH7-201ENST00000361762 THUMPD2Q9BTF0 503 aaKnown RBP20.56■□□□□ 0.88
PCDH7-201ENST00000361762 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
PCDH7-201ENST00000361762 FILIP1Q7Z7B0 1213 aa20.55■□□□□ 0.88
PCDH7-201ENST00000361762 PAF1Q8N7H5 531 aa20.55■□□□□ 0.88
PCDH7-201ENST00000361762 SRGAP3O43295 1099 aa20.55■□□□□ 0.88
PCDH7-201ENST00000361762 CCP110O43303 1012 aa20.55■□□□□ 0.88
PCDH7-201ENST00000361762 PDE3AQ14432 1141 aa20.55■□□□□ 0.88
PCDH7-201ENST00000361762 CCDC102AQ96A19 550 aa20.54■□□□□ 0.88
PCDH7-201ENST00000361762 CCT4P50991 539 aaKnown RBP20.54■□□□□ 0.88
PCDH7-201ENST00000361762 RAI14Q9P0K7 980 aa20.54■□□□□ 0.88
PCDH7-201ENST00000361762 CYP46A1Q9Y6A2 500 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms