RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
RPL39-201ENST00000361575 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
RPL39-201ENST00000361575 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
RPL39-201ENST00000361575 ZNF516Q92618 1163 aa8.64□□□□□ -1.03
RPL39-201ENST00000361575 KCTD12Q96CX2 325 aaKnown RBP8.64□□□□□ -1.03
RPL39-201ENST00000361575 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
RPL39-201ENST00000361575 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
RPL39-201ENST00000361575 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
RPL39-201ENST00000361575 GNEQ9Y223 722 aaKnown RBP8.62□□□□□ -1.03
RPL39-201ENST00000361575 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
RPL39-201ENST00000361575 CLDN10P78369 228 aa8.61□□□□□ -1.03
RPL39-201ENST00000361575 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
RPL39-201ENST00000361575 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
RPL39-201ENST00000361575 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
RPL39-201ENST00000361575 FOXD4L4Q8WXT5 416 aaPredicted RBP8.61□□□□□ -1.03
RPL39-201ENST00000361575 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
RPL39-201ENST00000361575 DKK1O94907 266 aa8.6□□□□□ -1.03
RPL39-201ENST00000361575 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
RPL39-201ENST00000361575 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.03
RPL39-201ENST00000361575 MYT1LQ9UL68 1186 aa8.6□□□□□ -1.03
RPL39-201ENST00000361575 RASA1P20936 1047 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 NKX2-3Q8TAU0 364 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 BAP1Q92560 729 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
RPL39-201ENST00000361575 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
RPL39-201ENST00000361575 SSFA2P28290 1259 aa8.58□□□□□ -1.04
RPL39-201ENST00000361575 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
RPL39-201ENST00000361575 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
RPL39-201ENST00000361575 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
RPL39-201ENST00000361575 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
RPL39-201ENST00000361575 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
RPL39-201ENST00000361575 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
RPL39-201ENST00000361575 GIGYF1O75420 1035 aaPredicted RBP8.57□□□□□ -1.04
RPL39-201ENST00000361575 MAP7D1Q3KQU3 841 aa8.57□□□□□ -1.04
RPL39-201ENST00000361575 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
RPL39-201ENST00000361575 ANKMY2Q8IV38 441 aa8.57□□□□□ -1.04
RPL39-201ENST00000361575 OGFOD1Q8N543 542 aa8.57□□□□□ -1.04
RPL39-201ENST00000361575 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
RPL39-201ENST00000361575 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
RPL39-201ENST00000361575 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
RPL39-201ENST00000361575 S1PR4O95977 384 aa8.56□□□□□ -1.04
RPL39-201ENST00000361575 DPYDQ12882 1025 aa8.56□□□□□ -1.04
RPL39-201ENST00000361575 EML3Q32P44 896 aa8.56□□□□□ -1.04
RPL39-201ENST00000361575 LARP1Q6PKG0 1096 aaKnown RBP8.56□□□□□ -1.04
RPL39-201ENST00000361575 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
RPL39-201ENST00000361575 ZNF511Q8NB15 262 aa8.56□□□□□ -1.04
RPL39-201ENST00000361575 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
RPL39-201ENST00000361575 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
RPL39-201ENST00000361575 C1QTNF2Q9BXJ5 285 aa8.56□□□□□ -1.04
RPL39-201ENST00000361575 PTPN5P54829 565 aa8.55□□□□□ -1.04
RPL39-201ENST00000361575 FAM200AQ8TCP9 573 aa8.55□□□□□ -1.04
RPL39-201ENST00000361575 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
RPL39-201ENST00000361575 SCNN1AP37088 669 aa8.54□□□□□ -1.04
RPL39-201ENST00000361575 B4GALNT3Q6L9W6 998 aa8.54□□□□□ -1.04
RPL39-201ENST00000361575 DOLKQ9UPQ8 538 aa8.54□□□□□ -1.04
RPL39-201ENST00000361575 ESPNB1AK53 854 aa8.53□□□□□ -1.04
RPL39-201ENST00000361575 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
RPL39-201ENST00000361575 BPHLQ86WA6 291 aaPredicted RBP8.53□□□□□ -1.04
RPL39-201ENST00000361575 SIX5Q8N196 739 aa8.53□□□□□ -1.04
RPL39-201ENST00000361575 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
RPL39-201ENST00000361575 SH3BP2P78314 561 aa8.52□□□□□ -1.05
RPL39-201ENST00000361575 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
RPL39-201ENST00000361575 NOD1Q9Y239 953 aa8.52□□□□□ -1.05
RPL39-201ENST00000361575 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
RPL39-201ENST00000361575 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
RPL39-201ENST00000361575 GTF2IP78347 998 aa8.51□□□□□ -1.05
RPL39-201ENST00000361575 SWI5Q1ZZU3 235 aa8.51□□□□□ -1.05
RPL39-201ENST00000361575 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
RPL39-201ENST00000361575 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
RPL39-201ENST00000361575 OCLNQ16625 522 aa8.5□□□□□ -1.05
RPL39-201ENST00000361575 TRMT44Q8IYL2 757 aaKnown RBP8.5□□□□□ -1.05
RPL39-201ENST00000361575 PPEF1O14829 653 aaPredicted RBP8.49□□□□□ -1.05
RPL39-201ENST00000361575 SERPINB4P48594 390 aa8.49□□□□□ -1.05
RPL39-201ENST00000361575 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
RPL39-201ENST00000361575 AGERQ15109 404 aa8.49□□□□□ -1.05
RPL39-201ENST00000361575 PLA2G2CQ5R387 149 aa8.49□□□□□ -1.05
RPL39-201ENST00000361575 CCER1Q8TC90 406 aaPredicted RBP8.49□□□□□ -1.05
RPL39-201ENST00000361575 SLC10A4Q96EP9 437 aa8.49□□□□□ -1.05
RPL39-201ENST00000361575 SFI1A8K8P3 1242 aa8.48□□□□□ -1.05
RPL39-201ENST00000361575 ARID4AP29374 1257 aaPredicted RBP8.48□□□□□ -1.05
RPL39-201ENST00000361575 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
RPL39-201ENST00000361575 NOM1Q5C9Z4 860 aaKnown RBP8.47□□□□□ -1.05
RPL39-201ENST00000361575 CCDC102BQ68D86 513 aa8.47□□□□□ -1.05
RPL39-201ENST00000361575 C1orf216Q8TAB5 229 aa8.47□□□□□ -1.05
RPL39-201ENST00000361575 PCDH10Q9P2E7 1040 aa8.47□□□□□ -1.05
RPL39-201ENST00000361575 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
RPL39-201ENST00000361575 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.06
RPL39-201ENST00000361575 PRMT3O60678 531 aa8.46□□□□□ -1.06
RPL39-201ENST00000361575 SKOR1P84550 965 aa8.46□□□□□ -1.06
RPL39-201ENST00000361575 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
RPL39-201ENST00000361575 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
RPL39-201ENST00000361575 TPCN2Q8NHX9 752 aa8.46□□□□□ -1.06
RPL39-201ENST00000361575 LGR5O75473 907 aa8.45□□□□□ -1.06
RPL39-201ENST00000361575 SCTRP47872 440 aa8.45□□□□□ -1.06
RPL39-201ENST00000361575 SEC13P55735 322 aa8.45□□□□□ -1.06
RPL39-201ENST00000361575 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms