RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 CPLX1O14810 134 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 UQCRHP07919 91 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 KRT85P78386 507 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 CCDC66A2RUB6 948 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 TRIM29Q14134 588 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
TMC3-201ENST00000359440 TSR1Q2NL82 804 aaKnown RBP13.53□□□□□ -0.24
TMC3-201ENST00000359440 ZMYM3Q14202 1370 aa13.53□□□□□ -0.24
TMC3-201ENST00000359440 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
TMC3-201ENST00000359440 SYNE3Q6ZMZ3 975 aa13.53□□□□□ -0.24
TMC3-201ENST00000359440 RTEL1-TNFRSF6BF6WH68 1400 aa13.53□□□□□ -0.24
TMC3-201ENST00000359440 KDM2BQ8NHM5 1336 aa13.53□□□□□ -0.24
TMC3-201ENST00000359440 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
TMC3-201ENST00000359440 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
TMC3-201ENST00000359440 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
TMC3-201ENST00000359440 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
TMC3-201ENST00000359440 FIBPO43427 364 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 KINO60870 393 aaKnown RBP13.51□□□□□ -0.25
TMC3-201ENST00000359440 NUCB1Q02818 461 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 CCDC70Q6NSX1 233 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 KIAA0556O60303 1618 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 TRDNQ13061 729 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 TPD52L1Q16890 204 aaPredicted RBP13.51□□□□□ -0.25
TMC3-201ENST00000359440 ANKRD20A12PQ8NF67 263 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 ZNF396Q96N95 335 aaPredicted RBP13.51□□□□□ -0.25
TMC3-201ENST00000359440 HS1BP3Q53T59 392 aa13.51□□□□□ -0.25
TMC3-201ENST00000359440 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
TMC3-201ENST00000359440 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
TMC3-201ENST00000359440 ACBD3Q9H3P7 528 aa13.5□□□□□ -0.25
TMC3-201ENST00000359440 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
TMC3-201ENST00000359440 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
TMC3-201ENST00000359440 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
TMC3-201ENST00000359440 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
TMC3-201ENST00000359440 PTPRCP08575 1304 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
TMC3-201ENST00000359440 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
TMC3-201ENST00000359440 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 UVSSAQ2YD98 709 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 RAB11FIP3O75154 756 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 SSFA2P28290 1259 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 TBC1D9Q6ZT07 1266 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
TMC3-201ENST00000359440 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
TMC3-201ENST00000359440 ATP10BO94823 1461 aa13.48□□□□□ -0.25
TMC3-201ENST00000359440 RBM10P98175 930 aaKnown RBP13.48□□□□□ -0.25
TMC3-201ENST00000359440 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
TMC3-201ENST00000359440 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
TMC3-201ENST00000359440 TNMDQ9H2S6 317 aa13.48□□□□□ -0.25
TMC3-201ENST00000359440 A0A0U1RQG5 324 aaPredicted RBP13.48□□□□□ -0.25
TMC3-201ENST00000359440 SYCE3A1L190 88 aa13.48□□□□□ -0.25
TMC3-201ENST00000359440 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
TMC3-201ENST00000359440 KRT32Q14532 448 aa13.47□□□□□ -0.25
TMC3-201ENST00000359440 KIF2AO00139 706 aaPredicted RBP13.47□□□□□ -0.25
TMC3-201ENST00000359440 HDGFL1Q5TGJ6 251 aa13.47□□□□□ -0.25
TMC3-201ENST00000359440 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
TMC3-201ENST00000359440 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 DYNC1I1O14576 645 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 MX1P20591 662 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 SAFBQ15424 915 aaKnown RBP eCLIP13.46□□□□□ -0.25
TMC3-201ENST00000359440 OLFM4Q6UX06 510 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 CFAP45Q9UL16 551 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
TMC3-201ENST00000359440 RALYLQ86SE5 291 aaKnown RBP13.46□□□□□ -0.25
TMC3-201ENST00000359440 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
TMC3-201ENST00000359440 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
TMC3-201ENST00000359440 NPHP1O15259 732 aa13.45□□□□□ -0.26
TMC3-201ENST00000359440 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
TMC3-201ENST00000359440 NLRP6P59044 892 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 KIF1BPQ96EK5 621 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 CWC15Q9P013 229 aaKnown RBP13.44□□□□□ -0.26
TMC3-201ENST00000359440 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 NOS1P29475 1434 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 TTC22Q5TAA0 569 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 BLOC1S2Q6QNY1 142 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 PRIMPOLQ96LW4 560 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 RAB3GAP1Q15042 981 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
TMC3-201ENST00000359440 PDRG1Q9NUG6 133 aa13.44□□□□□ -0.26
TMC3-201ENST00000359440 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
TMC3-201ENST00000359440 CCDC47Q96A33 483 aaKnown RBP13.44□□□□□ -0.26
TMC3-201ENST00000359440 SCAND2PQ9GZW5 306 aaPredicted RBP13.44□□□□□ -0.26
TMC3-201ENST00000359440 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
TMC3-201ENST00000359440 PLCH2O75038 1416 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms