RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
COL11A1-202ENST00000358392 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
COL11A1-202ENST00000358392 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
COL11A1-202ENST00000358392 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
COL11A1-202ENST00000358392 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
COL11A1-202ENST00000358392 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-202ENST00000358392 USP8P40818 1118 aa13.18□□□□□ -0.3
COL11A1-202ENST00000358392 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
COL11A1-202ENST00000358392 JMYQ8N9B5 988 aa13.18□□□□□ -0.3
COL11A1-202ENST00000358392 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
COL11A1-202ENST00000358392 K7ELQ4 463 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-202ENST00000358392 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
COL11A1-202ENST00000358392 PPM1FP49593 454 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-202ENST00000358392 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
COL11A1-202ENST00000358392 UBE4AQ14139 1066 aa13.18□□□□□ -0.3
COL11A1-202ENST00000358392 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL11A1-202ENST00000358392 IQCEQ6IPM2 695 aa13.17□□□□□ -0.3
COL11A1-202ENST00000358392 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
COL11A1-202ENST00000358392 HIP1O00291 1037 aa13.17□□□□□ -0.3
COL11A1-202ENST00000358392 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
COL11A1-202ENST00000358392 KRT85P78386 507 aa13.17□□□□□ -0.3
COL11A1-202ENST00000358392 RNF187Q5TA31 235 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-202ENST00000358392 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
COL11A1-202ENST00000358392 TAF4BQ92750 862 aa13.17□□□□□ -0.3
COL11A1-202ENST00000358392 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
COL11A1-202ENST00000358392 CEP63Q96MT8 703 aa13.17□□□□□ -0.3
COL11A1-202ENST00000358392 MCM2P49736 904 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
COL11A1-202ENST00000358392 SYCE3A1L190 88 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 MYL6BP14649 208 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 CASQ1P31415 396 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
COL11A1-202ENST00000358392 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 SERPINA10Q9UK55 444 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
COL11A1-202ENST00000358392 BCAR3O75815 825 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 GNAI2P04899 355 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 USP5P45974 858 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 CCDC91Q7Z6B0 441 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 CWC27Q6UX04 472 aaKnown RBP13.16□□□□□ -0.3
COL11A1-202ENST00000358392 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
COL11A1-202ENST00000358392 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
COL11A1-202ENST00000358392 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 PUS7Q96PZ0 661 aaKnown RBP13.15□□□□□ -0.3
COL11A1-202ENST00000358392 MPHOSPH10O00566 681 aaKnown RBP13.15□□□□□ -0.3
COL11A1-202ENST00000358392 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 SRRTQ9BXP5 876 aaKnown RBP13.15□□□□□ -0.3
COL11A1-202ENST00000358392 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 TNNT1P13805 278 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 CRACR2AQ9BSW2 395 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL11A1-202ENST00000358392 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 PSMD1Q99460 953 aa13.15□□□□□ -0.3
COL11A1-202ENST00000358392 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.31
COL11A1-202ENST00000358392 ZNF76P36508 570 aa13.14□□□□□ -0.31
COL11A1-202ENST00000358392 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
COL11A1-202ENST00000358392 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
COL11A1-202ENST00000358392 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
COL11A1-202ENST00000358392 UBXN4Q92575 508 aa13.14□□□□□ -0.31
COL11A1-202ENST00000358392 GNAI3P08754 354 aa13.14□□□□□ -0.31
COL11A1-202ENST00000358392 ANAPC15P60006 121 aa13.14□□□□□ -0.31
COL11A1-202ENST00000358392 CCDC88BA6NC98 1476 aa13.14□□□□□ -0.31
COL11A1-202ENST00000358392 MTHFSP49914 203 aa13.13□□□□□ -0.31
COL11A1-202ENST00000358392 TTC16Q8NEE8 873 aa13.13□□□□□ -0.31
COL11A1-202ENST00000358392 NOL7Q9UMY1 257 aaKnown RBP13.13□□□□□ -0.31
COL11A1-202ENST00000358392 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
COL11A1-202ENST00000358392 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-202ENST00000358392 STRN4Q9NRL3 753 aa13.13□□□□□ -0.31
COL11A1-202ENST00000358392 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
COL11A1-202ENST00000358392 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
COL11A1-202ENST00000358392 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-202ENST00000358392 TMEM132EQ6IEE7 984 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-202ENST00000358392 ATF3P18847 181 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 IFFO1Q0D2I5 559 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 CNTLNQ9NXG0 1405 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 AACSQ86V21 672 aa13.12□□□□□ -0.31
COL11A1-202ENST00000358392 TDO2P48775 406 aa13.11□□□□□ -0.31
COL11A1-202ENST00000358392 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 ESPNB1AK53 854 aa13.11□□□□□ -0.31
COL11A1-202ENST00000358392 NLRP6P59044 892 aa13.11□□□□□ -0.31
COL11A1-202ENST00000358392 TCP11L2Q8N4U5 519 aa13.11□□□□□ -0.31
COL11A1-202ENST00000358392 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 C11orf95C9JLR9 678 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 URI1O94763 535 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
COL11A1-202ENST00000358392 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
COL11A1-202ENST00000358392 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms