RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
CTSA-202ENST00000354880 IP6K1Q92551 441 aa20.62■□□□□ 0.89
CTSA-202ENST00000354880 PLEKHF1Q96S99 279 aa20.61■□□□□ 0.89
CTSA-202ENST00000354880 TOM1O60784 492 aa20.6■□□□□ 0.89
CTSA-202ENST00000354880 TCP11L2Q8N4U5 519 aa20.6■□□□□ 0.89
CTSA-202ENST00000354880 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
CTSA-202ENST00000354880 IQSEC2Q5JU85 1478 aa20.6■□□□□ 0.89
CTSA-202ENST00000354880 HMOX1P09601 288 aa20.6■□□□□ 0.89
CTSA-202ENST00000354880 CRYBG1Q9Y4K1 1723 aa20.59■□□□□ 0.89
CTSA-202ENST00000354880 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
CTSA-202ENST00000354880 ZBTB7CA1YPR0 619 aa20.59■□□□□ 0.89
CTSA-202ENST00000354880 AHDC1Q5TGY3 1603 aaPredicted RBP20.58■□□□□ 0.89
CTSA-202ENST00000354880 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.89
CTSA-202ENST00000354880 CABLES1Q8TDN4 633 aa20.58■□□□□ 0.89
CTSA-202ENST00000354880 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
CTSA-202ENST00000354880 PDE3BQ13370 1112 aa20.57■□□□□ 0.88
CTSA-202ENST00000354880 NEFMP07197 916 aa20.56■□□□□ 0.88
CTSA-202ENST00000354880 ZC3H6P61129 1189 aaKnown RBP20.56■□□□□ 0.88
CTSA-202ENST00000354880 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
CTSA-202ENST00000354880 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
CTSA-202ENST00000354880 NEUROD2Q15784 382 aa20.55■□□□□ 0.88
CTSA-202ENST00000354880 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
CTSA-202ENST00000354880 LRRC59Q96AG4 307 aaKnown RBP20.55■□□□□ 0.88
CTSA-202ENST00000354880 RRP7AQ9Y3A4 280 aaKnown RBP20.55■□□□□ 0.88
CTSA-202ENST00000354880 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
CTSA-202ENST00000354880 EYA1Q99502 592 aa20.54■□□□□ 0.88
CTSA-202ENST00000354880 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
CTSA-202ENST00000354880 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
CTSA-202ENST00000354880 UBAP1LF5GYI3 381 aa20.53■□□□□ 0.88
CTSA-202ENST00000354880 CPDO75976 1380 aa20.52■□□□□ 0.88
CTSA-202ENST00000354880 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
CTSA-202ENST00000354880 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
CTSA-202ENST00000354880 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
CTSA-202ENST00000354880 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
CTSA-202ENST00000354880 KDRP35968 1356 aa20.51■□□□□ 0.87
CTSA-202ENST00000354880 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 CDCA7LQ96GN5 454 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 PHACTR3Q96KR7 559 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
CTSA-202ENST00000354880 AXIN2Q9Y2T1 843 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 ABCA3Q99758 1704 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 HAP1P54257 671 aaPredicted RBP20.5■□□□□ 0.87
CTSA-202ENST00000354880 CERKQ8TCT0 537 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 KIAA0232Q92628 1395 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 ABCC6O95255 1503 aa20.5■□□□□ 0.87
CTSA-202ENST00000354880 PHLPP1O60346 1717 aa20.49■□□□□ 0.87
CTSA-202ENST00000354880 COL18A1P39060 1754 aa20.48■□□□□ 0.87
CTSA-202ENST00000354880 RGPD5Q99666 1765 aa20.48■□□□□ 0.87
CTSA-202ENST00000354880 RIPK4P57078 832 aa20.48■□□□□ 0.87
CTSA-202ENST00000354880 ANKRD24Q8TF21 1146 aa20.48■□□□□ 0.87
CTSA-202ENST00000354880 NFE2L2Q16236 605 aa20.47■□□□□ 0.87
CTSA-202ENST00000354880 COL16A1Q07092 1604 aaPredicted RBP20.47■□□□□ 0.87
CTSA-202ENST00000354880 CHRNA2Q15822 529 aa20.46■□□□□ 0.87
CTSA-202ENST00000354880 ERBB3P21860 1342 aa20.46■□□□□ 0.87
CTSA-202ENST00000354880 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
CTSA-202ENST00000354880 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
CTSA-202ENST00000354880 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
CTSA-202ENST00000354880 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
CTSA-202ENST00000354880 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
CTSA-202ENST00000354880 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.86
CTSA-202ENST00000354880 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
CTSA-202ENST00000354880 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
CTSA-202ENST00000354880 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
CTSA-202ENST00000354880 E9PSI1 815 aa20.43■□□□□ 0.86
CTSA-202ENST00000354880 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
CTSA-202ENST00000354880 DLG5Q8TDM6 1919 aa20.42■□□□□ 0.86
CTSA-202ENST00000354880 DUSP27Q5VZP5 1158 aa20.41■□□□□ 0.86
CTSA-202ENST00000354880 CAMTA1Q9Y6Y1 1673 aa20.41■□□□□ 0.86
CTSA-202ENST00000354880 NCAPD2Q15021 1401 aa20.41■□□□□ 0.86
CTSA-202ENST00000354880 TRMT2AQ8IZ69 625 aaKnown RBP20.41■□□□□ 0.86
CTSA-202ENST00000354880 LMOD3Q0VAK6 560 aa20.4■□□□□ 0.86
CTSA-202ENST00000354880 LMO7Q8WWI1 1683 aa20.39■□□□□ 0.86
CTSA-202ENST00000354880 FAM208AQ9UK61 1670 aaKnown RBP20.39■□□□□ 0.85
CTSA-202ENST00000354880 CSB-PGBD3P0DP91 1061 aa20.38■□□□□ 0.85
CTSA-202ENST00000354880 MTHFSDQ2M296 383 aaKnown RBP20.38■□□□□ 0.85
CTSA-202ENST00000354880 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
CTSA-202ENST00000354880 NLRP2Q9NX02 1062 aa20.37■□□□□ 0.85
CTSA-202ENST00000354880 SUPT16HQ9Y5B9 1047 aaKnown RBP20.37■□□□□ 0.85
CTSA-202ENST00000354880 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
CTSA-202ENST00000354880 IL16Q14005 1332 aa20.36■□□□□ 0.85
CTSA-202ENST00000354880 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
CTSA-202ENST00000354880 COL5A2P05997 1499 aaPredicted RBP20.35■□□□□ 0.85
CTSA-202ENST00000354880 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
CTSA-202ENST00000354880 MYH16Q9H6N6 1097 aa20.34■□□□□ 0.85
CTSA-202ENST00000354880 WDR17Q8IZU2 1322 aa20.34■□□□□ 0.85
CTSA-202ENST00000354880 RCAN3Q9UKA8 241 aa20.32■□□□□ 0.84
CTSA-202ENST00000354880 COL14A1Q05707 1796 aaKnown RBP20.32■□□□□ 0.84
CTSA-202ENST00000354880 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
CTSA-202ENST00000354880 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
CTSA-202ENST00000354880 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
CTSA-202ENST00000354880 PLEKHO1Q53GL0 409 aaPredicted RBP20.3■□□□□ 0.84
CTSA-202ENST00000354880 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
CTSA-202ENST00000354880 RAPGEF4Q8WZA2 1011 aa20.3■□□□□ 0.84
CTSA-202ENST00000354880 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
CTSA-202ENST00000354880 JCADQ9P266 1359 aa20.3■□□□□ 0.84
CTSA-202ENST00000354880 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
CTSA-202ENST00000354880 EVA1CP58658 441 aa20.3■□□□□ 0.84
CTSA-202ENST00000354880 BTG4Q9NY30 223 aa20.3■□□□□ 0.84
CTSA-202ENST00000354880 FANCIQ9NVI1 1328 aa20.29■□□□□ 0.84
CTSA-202ENST00000354880 GNAT3A8MTJ3 354 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms