RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 CDC42BPBQ9Y5S2 1711 aa9.58□□□□□ -0.88
CD46-203ENST00000354848 GSPT1P15170 499 aaKnown RBP9.58□□□□□ -0.88
CD46-203ENST00000354848 CDK11BP21127 795 aaKnown RBP9.58□□□□□ -0.88
CD46-203ENST00000354848 MTHFSP49914 203 aa9.58□□□□□ -0.88
CD46-203ENST00000354848 DIAPH3Q9NSV4 1193 aa9.58□□□□□ -0.88
CD46-203ENST00000354848 OGFRQ9NZT2 677 aa9.58□□□□□ -0.88
CD46-203ENST00000354848 MAST1Q9Y2H9 1570 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 ABCC11Q96J66 1382 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 IPO8O15397 1037 aaKnown RBP9.57□□□□□ -0.88
CD46-203ENST00000354848 CTIFO43310 598 aaKnown RBP9.57□□□□□ -0.88
CD46-203ENST00000354848 ST18O60284 1047 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 UVSSAQ2YD98 709 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 NSD3Q9BZ95 1437 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 ADCY5O95622 1261 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 SYAP1Q96A49 352 aaPredicted RBP9.57□□□□□ -0.88
CD46-203ENST00000354848 ABCA8O94911 1581 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 MED14O60244 1454 aa9.57□□□□□ -0.88
CD46-203ENST00000354848 KIAA1210Q9ULL0 1709 aa9.56□□□□□ -0.88
CD46-203ENST00000354848 IRX5P78411 483 aaPredicted RBP9.56□□□□□ -0.88
CD46-203ENST00000354848 GABPB1Q06547 395 aaPredicted RBP9.56□□□□□ -0.88
CD46-203ENST00000354848 FAM184AQ8NB25 1140 aa9.56□□□□□ -0.88
CD46-203ENST00000354848 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
CD46-203ENST00000354848 TCHHQ07283 1943 aa9.56□□□□□ -0.88
CD46-203ENST00000354848 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
CD46-203ENST00000354848 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.886e-10■■■□□ 18.8
CD46-203ENST00000354848 CHAF1AQ13111 956 aaPredicted RBP9.56□□□□□ -0.88
CD46-203ENST00000354848 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
CD46-203ENST00000354848 CFAP53Q96M91 514 aa9.56□□□□□ -0.88
CD46-203ENST00000354848 PHF14O94880 888 aa9.55□□□□□ -0.88
CD46-203ENST00000354848 SLFN14P0C7P3 912 aa9.55□□□□□ -0.88
CD46-203ENST00000354848 TAF7LQ5H9L4 462 aa9.55□□□□□ -0.88
CD46-203ENST00000354848 KIAA1524Q8TCG1 905 aa9.55□□□□□ -0.88
CD46-203ENST00000354848 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
CD46-203ENST00000354848 KCNJ4P48050 445 aa9.55□□□□□ -0.88
CD46-203ENST00000354848 CD109Q6YHK3 1445 aa9.55□□□□□ -0.88
CD46-203ENST00000354848 SIRT2Q8IXJ6 389 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 CTNNA3Q9UI47 895 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 BRD1O95696 1058 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 NCBP1Q09161 790 aaKnown RBP9.54□□□□□ -0.88
CD46-203ENST00000354848 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 SYCP2Q9BX26 1530 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 ANKRD36BQ8N2N9 1353 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 ATP10BO94823 1461 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 PYCARDQ9ULZ3 195 aa9.54□□□□□ -0.88
CD46-203ENST00000354848 PTPRTO14522 1441 aa9.53□□□□□ -0.88
CD46-203ENST00000354848 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
CD46-203ENST00000354848 KCNF1Q9H3M0 494 aa9.53□□□□□ -0.88
CD46-203ENST00000354848 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
CD46-203ENST00000354848 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
CD46-203ENST00000354848 ERCC6Q03468 1493 aa9.52□□□□□ -0.88
CD46-203ENST00000354848 HCLS1P14317 486 aaPredicted RBP9.52□□□□□ -0.88
CD46-203ENST00000354848 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.88
CD46-203ENST00000354848 TTC22Q5TAA0 569 aa9.52□□□□□ -0.88
CD46-203ENST00000354848 DDX41Q9UJV9 622 aaKnown RBP9.52□□□□□ -0.88
CD46-203ENST00000354848 CCDC66A2RUB6 948 aa9.52□□□□□ -0.89
CD46-203ENST00000354848 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
CD46-203ENST00000354848 TRPM2O94759 1503 aa9.52□□□□□ -0.89
CD46-203ENST00000354848 KDM4AO75164 1064 aa9.52□□□□□ -0.89
CD46-203ENST00000354848 IL16Q14005 1332 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 USP32Q8NFA0 1604 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 SLC20A2Q08357 652 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 SYCP1Q15431 976 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 TERF2Q15554 542 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 TMX3Q96JJ7 454 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 PLEKHF1Q96S99 279 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 YEATS2Q9ULM3 1422 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 SLC12A5Q9H2X9 1139 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 MORC2Q9Y6X9 1032 aaPredicted RBP9.51□□□□□ -0.89
CD46-203ENST00000354848 MYO3AQ8NEV4 1616 aa9.51□□□□□ -0.89
CD46-203ENST00000354848 SMARCA5O60264 1052 aaPredicted RBP9.5□□□□□ -0.89
CD46-203ENST00000354848 MAPK8IP2Q13387 824 aaPredicted RBP9.5□□□□□ -0.89
CD46-203ENST00000354848 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
CD46-203ENST00000354848 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
CD46-203ENST00000354848 USP48Q86UV5 1035 aa9.5□□□□□ -0.89
CD46-203ENST00000354848 TIGD1Q96MW7 591 aa9.5□□□□□ -0.89
CD46-203ENST00000354848 DNAJC2Q99543 621 aaKnown RBP9.5□□□□□ -0.89
CD46-203ENST00000354848 ABCA6Q8N139 1617 aa9.5□□□□□ -0.89
CD46-203ENST00000354848 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
CD46-203ENST00000354848 CCDC183Q5T5S1 534 aa9.5□□□□□ -0.89
CD46-203ENST00000354848 AP5Z1O43299 807 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 BRPF1P55201 1214 aaPredicted RBP9.49□□□□□ -0.89
CD46-203ENST00000354848 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
CD46-203ENST00000354848 PIK3R4Q99570 1358 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 SBNO2Q9Y2G9 1366 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 TPM3P06753 285 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 SDSP20132 328 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 NEK4P51957 841 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 KNDC1Q76NI1 1749 aa9.49□□□□□ -0.89
CD46-203ENST00000354848 CUL4AQ13619 759 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
CD46-203ENST00000354848 CASC1Q6TDU7 716 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 KIF18AQ8NI77 898 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 TRAPPC8Q9Y2L5 1435 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms