RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PARD3Q8TEW0 1356 aa22.76■■□□□ 1.23
PDGFA-201ENST00000354513 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
PDGFA-201ENST00000354513 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
PDGFA-201ENST00000354513 PDE3BQ13370 1112 aa22.75■■□□□ 1.23
PDGFA-201ENST00000354513 APBA3O96018 575 aa22.74■■□□□ 1.23
PDGFA-201ENST00000354513 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
PDGFA-201ENST00000354513 OVOS2A0A0J9YW53 1432 aa22.73■■□□□ 1.23
PDGFA-201ENST00000354513 OVOS2Q6IE36 1432 aa22.73■■□□□ 1.23
PDGFA-201ENST00000354513 ARHGEF25Q86VW2 580 aa22.73■■□□□ 1.23
PDGFA-201ENST00000354513 WDR17Q8IZU2 1322 aa22.72■■□□□ 1.23
PDGFA-201ENST00000354513 TTC21AQ8NDW8 1320 aa22.72■■□□□ 1.23
PDGFA-201ENST00000354513 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
PDGFA-201ENST00000354513 ZNF692Q9BU19 519 aaPredicted RBP22.71■■□□□ 1.23
PDGFA-201ENST00000354513 CASZ1Q86V15 1759 aa22.71■■□□□ 1.23
PDGFA-201ENST00000354513 USP31Q70CQ4 1352 aa22.68■■□□□ 1.22
PDGFA-201ENST00000354513 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
PDGFA-201ENST00000354513 NHSQ6T4R5 1651 aa22.67■■□□□ 1.22
PDGFA-201ENST00000354513 SOX12O15370 315 aa22.66■■□□□ 1.22
PDGFA-201ENST00000354513 PTF1AQ7RTS3 328 aa22.66■■□□□ 1.22
PDGFA-201ENST00000354513 BCL9O00512 1426 aa22.65■■□□□ 1.22
PDGFA-201ENST00000354513 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
PDGFA-201ENST00000354513 CARD11Q9BXL7 1154 aa22.64■■□□□ 1.22
PDGFA-201ENST00000354513 DDB1Q16531 1140 aa22.63■■□□□ 1.21
PDGFA-201ENST00000354513 MARCH10Q8NA82 808 aaPredicted RBP22.63■■□□□ 1.21
PDGFA-201ENST00000354513 FAM208AQ9UK61 1670 aaKnown RBP22.63■■□□□ 1.21
PDGFA-201ENST00000354513 NME9Q86XW9 330 aa22.62■■□□□ 1.21
PDGFA-201ENST00000354513 CARD10Q9BWT7 1032 aa22.62■■□□□ 1.21
PDGFA-201ENST00000354513 TNS2Q63HR2 1409 aa22.62■■□□□ 1.21
PDGFA-201ENST00000354513 EDC4Q6P2E9 1401 aaKnown RBP22.62■■□□□ 1.21
PDGFA-201ENST00000354513 RGPD2P0DJD1 1756 aa22.62■■□□□ 1.21
PDGFA-201ENST00000354513 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
PDGFA-201ENST00000354513 TONSLQ96HA7 1378 aa22.61■■□□□ 1.21
PDGFA-201ENST00000354513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDGFA-201ENST00000354513 BTAF1O14981 1849 aa22.59■■□□□ 1.21
PDGFA-201ENST00000354513 SHANK3Q9BYB0 1731 aa22.59■■□□□ 1.21
PDGFA-201ENST00000354513 C11orf95C9JLR9 678 aaPredicted RBP22.58■■□□□ 1.21
PDGFA-201ENST00000354513 SLC12A5Q9H2X9 1139 aa22.58■■□□□ 1.21
PDGFA-201ENST00000354513 CCDC7Q96M83 1385 aa22.58■■□□□ 1.21
PDGFA-201ENST00000354513 PAPPAQ13219 1627 aa22.57■■□□□ 1.2
PDGFA-201ENST00000354513 ERBB3P21860 1342 aa22.57■■□□□ 1.2
PDGFA-201ENST00000354513 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
PDGFA-201ENST00000354513 ANO8Q9HCE9 1232 aaPredicted RBP22.57■■□□□ 1.2
PDGFA-201ENST00000354513 PLSCR1O15162 318 aa22.56■■□□□ 1.2
PDGFA-201ENST00000354513 TESK2Q96S53 571 aa22.56■■□□□ 1.2
PDGFA-201ENST00000354513 BCL11BQ9C0K0 894 aaPredicted RBP22.56■■□□□ 1.2
PDGFA-201ENST00000354513 CSB-PGBD3P0DP91 1061 aa22.55■■□□□ 1.2
PDGFA-201ENST00000354513 MYOM1P52179 1685 aa22.54■■□□□ 1.2
PDGFA-201ENST00000354513 PROM2Q8N271 834 aa22.54■■□□□ 1.2
PDGFA-201ENST00000354513 TMC1Q8TDI8 760 aa22.54■■□□□ 1.2
PDGFA-201ENST00000354513 KIF20BQ96Q89 1820 aa22.53■■□□□ 1.2
PDGFA-201ENST00000354513 NBPF14Q5TI25 921 aa22.53■■□□□ 1.2
PDGFA-201ENST00000354513 PUS7Q96PZ0 661 aaKnown RBP22.52■■□□□ 1.2
PDGFA-201ENST00000354513 HDGFL2Q7Z4V5 671 aaPredicted RBP22.51■■□□□ 1.19
PDGFA-201ENST00000354513 DOT1LQ8TEK3 1739 aa22.5■■□□□ 1.19
PDGFA-201ENST00000354513 TUBGCP6Q96RT7 1819 aa22.48■■□□□ 1.19
PDGFA-201ENST00000354513 ST20-MTHFSA0A0A6YYL1 179 aa22.48■■□□□ 1.19
PDGFA-201ENST00000354513 EXOC5O00471 708 aa22.48■■□□□ 1.19
PDGFA-201ENST00000354513 ANKRD24Q8TF21 1146 aa22.48■■□□□ 1.19
PDGFA-201ENST00000354513 PDGFDQ9GZP0 370 aaPredicted RBP22.48■■□□□ 1.19
PDGFA-201ENST00000354513 NINLQ9Y2I6 1382 aa22.48■■□□□ 1.19
PDGFA-201ENST00000354513 KCNQ2O43526 872 aa22.47■■□□□ 1.19
PDGFA-201ENST00000354513 TERF2IPQ9NYB0 399 aa22.47■■□□□ 1.19
PDGFA-201ENST00000354513 QSER1Q2KHR3 1735 aa22.47■■□□□ 1.19
PDGFA-201ENST00000354513 NLRP2Q9NX02 1062 aa22.45■■□□□ 1.18
PDGFA-201ENST00000354513 LY75O60449 1722 aa22.44■■□□□ 1.18
PDGFA-201ENST00000354513 IL2RBP14784 551 aa22.43■■□□□ 1.18
PDGFA-201ENST00000354513 TXNRD1Q16881 649 aa22.43■■□□□ 1.18
PDGFA-201ENST00000354513 SPON1Q9HCB6 807 aa22.43■■□□□ 1.18
PDGFA-201ENST00000354513 KAT6BQ8WYB5 2073 aa22.43■■□□□ 1.18
PDGFA-201ENST00000354513 ANKRD36BQ8N2N9 1353 aa22.42■■□□□ 1.18
PDGFA-201ENST00000354513 COL24A1Q17RW2 1714 aa22.42■■□□□ 1.18
PDGFA-201ENST00000354513 IP6K1Q92551 441 aa22.41■■□□□ 1.18
PDGFA-201ENST00000354513 ACSBG1Q96GR2 724 aa22.41■■□□□ 1.18
PDGFA-201ENST00000354513 FBLN1P23142 703 aa22.4■■□□□ 1.18
PDGFA-201ENST00000354513 MAP3K19Q56UN5 1328 aa22.4■■□□□ 1.18
PDGFA-201ENST00000354513 USP47Q96K76 1375 aa22.4■■□□□ 1.18
PDGFA-201ENST00000354513 ANKRD26Q9UPS8 1709 aa22.39■■□□□ 1.17
PDGFA-201ENST00000354513 MEGF6O75095 1541 aa22.39■■□□□ 1.17
PDGFA-201ENST00000354513 HOXC9P31274 260 aa22.36■■□□□ 1.17
PDGFA-201ENST00000354513 SLC15A2Q16348 729 aa22.36■■□□□ 1.17
PDGFA-201ENST00000354513 PTGER2P43116 358 aa22.35■■□□□ 1.17
PDGFA-201ENST00000354513 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
PDGFA-201ENST00000354513 ZBTB7AO95365 584 aa22.34■■□□□ 1.17
PDGFA-201ENST00000354513 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
PDGFA-201ENST00000354513 COG3Q96JB2 828 aa22.34■■□□□ 1.17
PDGFA-201ENST00000354513 RTL1A6NKG5 1358 aa22.34■■□□□ 1.17
PDGFA-201ENST00000354513 STK32BQ9NY57 414 aa22.33■■□□□ 1.17
PDGFA-201ENST00000354513 PPP1R1BQ9UD71 204 aaPredicted RBP22.33■■□□□ 1.17
PDGFA-201ENST00000354513 NSD2O96028 1365 aa22.33■■□□□ 1.17
PDGFA-201ENST00000354513 TOGARAM1Q9Y4F4 1720 aa22.33■■□□□ 1.17
PDGFA-201ENST00000354513 PKD1L3Q7Z443 1732 aa22.32■■□□□ 1.16
PDGFA-201ENST00000354513 LRRC4BQ9NT99 713 aa22.31■■□□□ 1.16
PDGFA-201ENST00000354513 FYB1O15117 783 aa22.31■■□□□ 1.16
PDGFA-201ENST00000354513 ZNF827Q17R98 1081 aa22.31■■□□□ 1.16
PDGFA-201ENST00000354513 SGIP1Q9BQI5 828 aa22.31■■□□□ 1.16
PDGFA-201ENST00000354513 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
PDGFA-201ENST00000354513 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
PDGFA-201ENST00000354513 ITGB4P16144 1822 aa22.29■■□□□ 1.16
PDGFA-201ENST00000354513 TMF1P82094 1093 aa22.29■■□□□ 1.16
PDGFA-201ENST00000354513 ATF5Q9Y2D1 282 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms