RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 MYT1Q01538 1121 aa26.11■■□□□ 1.77
VPS72-201ENST00000354473 LARP1Q6PKG0 1096 aaKnown RBP26.11■■□□□ 1.77
VPS72-201ENST00000354473 ABCC6O95255 1503 aa26.09■■□□□ 1.77
VPS72-201ENST00000354473 UPF1Q92900 1129 aaKnown RBP eCLIP26.09■■□□□ 1.77
VPS72-201ENST00000354473 COG3Q96JB2 828 aa26.09■■□□□ 1.77
VPS72-201ENST00000354473 USP35Q9P2H5 1018 aa26.09■■□□□ 1.77
VPS72-201ENST00000354473 THSD7AQ9UPZ6 1657 aa26.08■■□□□ 1.77
VPS72-201ENST00000354473 NSD3Q9BZ95 1437 aa26.08■■□□□ 1.77
VPS72-201ENST00000354473 CARD14Q9BXL6 1004 aa26.08■■□□□ 1.77
VPS72-201ENST00000354473 AXIN2Q9Y2T1 843 aa26.08■■□□□ 1.77
VPS72-201ENST00000354473 FYB1O15117 783 aa26.06■■□□□ 1.76
VPS72-201ENST00000354473 CRB1P82279 1406 aa26.05■■□□□ 1.76
VPS72-201ENST00000354473 C11orf95C9JLR9 678 aaPredicted RBP26.05■■□□□ 1.76
VPS72-201ENST00000354473 GGNBP2Q9H3C7 697 aa26.04■■□□□ 1.76
VPS72-201ENST00000354473 KRT27Q7Z3Y8 459 aa26.02■■□□□ 1.76
VPS72-201ENST00000354473 TCP11L2Q8N4U5 519 aa26.02■■□□□ 1.76
VPS72-201ENST00000354473 WDR17Q8IZU2 1322 aa26.02■■□□□ 1.76
VPS72-201ENST00000354473 TOM1L2Q6ZVM7 507 aa26.01■■□□□ 1.75
VPS72-201ENST00000354473 BARGINQ6ZT62 677 aa26■■□□□ 1.75
VPS72-201ENST00000354473 CSB-PGBD3P0DP91 1061 aa25.99■■□□□ 1.75
VPS72-201ENST00000354473 KIF7Q2M1P5 1343 aa25.98■■□□□ 1.75
VPS72-201ENST00000354473 THRAP3Q9Y2W1 955 aaKnown RBP25.98■■□□□ 1.75
VPS72-201ENST00000354473 CGNL1Q0VF96 1302 aa25.97■■□□□ 1.75
VPS72-201ENST00000354473 FBLN1P23142 703 aa25.97■■□□□ 1.75
VPS72-201ENST00000354473 EP400Q96L91 3159 aa25.97■■□□□ 1.75
VPS72-201ENST00000354473 MAP3K19Q56UN5 1328 aa25.96■■□□□ 1.75
VPS72-201ENST00000354473 WNK3Q9BYP7 1800 aa25.96■■□□□ 1.75
VPS72-201ENST00000354473 PANK3Q9H999 370 aa25.96■■□□□ 1.75
VPS72-201ENST00000354473 ERBB3P21860 1342 aa25.95■■□□□ 1.75
VPS72-201ENST00000354473 BLMP54132 1417 aaPredicted RBP25.95■■□□□ 1.74
VPS72-201ENST00000354473 PARP4Q9UKK3 1724 aaKnown RBP25.95■■□□□ 1.74
VPS72-201ENST00000354473 IP6K1Q92551 441 aa25.93■■□□□ 1.74
VPS72-201ENST00000354473 ANKRD26Q9UPS8 1709 aa25.92■■□□□ 1.74
VPS72-201ENST00000354473 AMPHP49418 695 aa25.92■■□□□ 1.74
VPS72-201ENST00000354473 RRS1Q15050 365 aaKnown RBP25.92■■□□□ 1.74
VPS72-201ENST00000354473 ANKRD24Q8TF21 1146 aa25.92■■□□□ 1.74
VPS72-201ENST00000354473 CARD10Q9BWT7 1032 aa25.92■■□□□ 1.74
VPS72-201ENST00000354473 FAM182BQ5T319 152 aa25.9■■□□□ 1.74
VPS72-201ENST00000354473 RTL1A6NKG5 1358 aa25.9■■□□□ 1.74
VPS72-201ENST00000354473 LRRC37A3O60309 1634 aa25.9■■□□□ 1.74
VPS72-201ENST00000354473 HOXC9P31274 260 aa25.89■■□□□ 1.74
VPS72-201ENST00000354473 NLRP2Q9NX02 1062 aa25.89■■□□□ 1.74
VPS72-201ENST00000354473 FAM208AQ9UK61 1670 aaKnown RBP25.89■■□□□ 1.74
VPS72-201ENST00000354473 CCDC7Q96M83 1385 aa25.89■■□□□ 1.73
VPS72-201ENST00000354473 PDE3BQ13370 1112 aa25.88■■□□□ 1.73
VPS72-201ENST00000354473 LTV1Q96GA3 475 aaPredicted RBP25.88■■□□□ 1.73
VPS72-201ENST00000354473 PEAK1Q9H792 1746 aa25.87■■□□□ 1.73
VPS72-201ENST00000354473 CCDC125Q86Z20 511 aa25.87■■□□□ 1.73
VPS72-201ENST00000354473 DISP2A7MBM2 1401 aa25.86■■□□□ 1.73
VPS72-201ENST00000354473 CDCA7Q9BWT1 371 aaPredicted RBP25.85■■□□□ 1.73
VPS72-201ENST00000354473 WASHC2AQ641Q2 1341 aa25.83■■□□□ 1.73
VPS72-201ENST00000354473 NSD2O96028 1365 aa25.83■■□□□ 1.73
VPS72-201ENST00000354473 DDB1Q16531 1140 aa25.83■■□□□ 1.73
VPS72-201ENST00000354473 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
VPS72-201ENST00000354473 RGPD2P0DJD1 1756 aa25.82■■□□□ 1.72
VPS72-201ENST00000354473 FLT4P35916 1363 aa25.82■■□□□ 1.72
VPS72-201ENST00000354473 MAP2P11137 1827 aaKnown RBP25.82■■□□□ 1.72
VPS72-201ENST00000354473 RGPD1P0DJD0 1748 aa25.82■■□□□ 1.72
VPS72-201ENST00000354473 EMILIN1Q9Y6C2 1016 aa25.82■■□□□ 1.72
VPS72-201ENST00000354473 KIF24Q5T7B8 1368 aa25.81■■□□□ 1.72
VPS72-201ENST00000354473 SF3B2Q13435 895 aaKnown RBP25.81■■□□□ 1.72
VPS72-201ENST00000354473 FAM196AQ6ZSG2 479 aa25.81■■□□□ 1.72
VPS72-201ENST00000354473 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
VPS72-201ENST00000354473 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
VPS72-201ENST00000354473 INSRP06213 1382 aa25.8■■□□□ 1.72
VPS72-201ENST00000354473 HSP90AB2PQ58FF8 381 aa25.79■■□□□ 1.72
VPS72-201ENST00000354473 PPM1GO15355 546 aaPredicted RBP25.78■■□□□ 1.72
VPS72-201ENST00000354473 TNS1Q9HBL0 1735 aaKnown RBP25.78■■□□□ 1.72
VPS72-201ENST00000354473 IL2RBP14784 551 aa25.77■■□□□ 1.72
VPS72-201ENST00000354473 OVOS2A0A0G2JMS6 1433 aa25.77■■□□□ 1.72
VPS72-201ENST00000354473 TNS2Q63HR2 1409 aa25.77■■□□□ 1.72
VPS72-201ENST00000354473 EXOC5O00471 708 aa25.74■■□□□ 1.71
VPS72-201ENST00000354473 AMER1Q5JTC6 1135 aaPredicted RBP25.74■■□□□ 1.71
VPS72-201ENST00000354473 MORC1Q86VD1 984 aa25.74■■□□□ 1.71
VPS72-201ENST00000354473 POLKQ9UBT6 870 aa25.74■■□□□ 1.71
VPS72-201ENST00000354473 TRIM37O94972 964 aa25.73■■□□□ 1.71
VPS72-201ENST00000354473 DEFB132Q7Z7B7 95 aa25.73■■□□□ 1.71
VPS72-201ENST00000354473 MARCH10Q8NA82 808 aaPredicted RBP25.72■■□□□ 1.71
VPS72-201ENST00000354473 PER1O15534 1290 aaPredicted RBP25.71■■□□□ 1.71
VPS72-201ENST00000354473 NBPF6Q5VWK0 638 aa25.71■■□□□ 1.71
VPS72-201ENST00000354473 NBPF4Q96M43 638 aa25.71■■□□□ 1.71
VPS72-201ENST00000354473 BAG6P46379 1132 aa25.7■■□□□ 1.71
VPS72-201ENST00000354473 SBF2Q86WG5 1849 aa25.7■■□□□ 1.7
VPS72-201ENST00000354473 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
VPS72-201ENST00000354473 MEGF6O75095 1541 aa25.68■■□□□ 1.7
VPS72-201ENST00000354473 BCL9O00512 1426 aa25.66■■□□□ 1.7
VPS72-201ENST00000354473 CC2D1BQ5T0F9 858 aaKnown RBP25.65■■□□□ 1.7
VPS72-201ENST00000354473 APBA3O96018 575 aa25.63■■□□□ 1.69
VPS72-201ENST00000354473 EN1Q05925 392 aaPredicted RBP25.63■■□□□ 1.69
VPS72-201ENST00000354473 SHANK3Q9BYB0 1731 aa25.63■■□□□ 1.69
VPS72-201ENST00000354473 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
VPS72-201ENST00000354473 RAPGEF4Q8WZA2 1011 aa25.63■■□□□ 1.69
VPS72-201ENST00000354473 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
VPS72-201ENST00000354473 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
VPS72-201ENST00000354473 NCAPD2Q15021 1401 aa25.61■■□□□ 1.69
VPS72-201ENST00000354473 DDX54Q8TDD1 881 aaKnown RBP25.6■■□□□ 1.69
VPS72-201ENST00000354473 TATP17735 454 aaPredicted RBP25.59■■□□□ 1.69
VPS72-201ENST00000354473 ZCRB1Q8TBF4 217 aaKnown RBP25.59■■□□□ 1.69
VPS72-201ENST00000354473 EYA1Q99502 592 aa25.59■■□□□ 1.69
VPS72-201ENST00000354473 NHSQ6T4R5 1651 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms