RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 RNF214Q8ND24 703 aa17.85■□□□□ 0.45
NUP50-201ENST00000347635 PCDHB15Q9Y5E8 787 aa17.85■□□□□ 0.45
NUP50-201ENST00000347635 ERC2O15083 957 aa17.85■□□□□ 0.45
NUP50-201ENST00000347635 TPM4P67936 248 aa17.85■□□□□ 0.45
NUP50-201ENST00000347635 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
NUP50-201ENST00000347635 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
NUP50-201ENST00000347635 POLR3AO14802 1390 aaPredicted RBP17.84■□□□□ 0.45
NUP50-201ENST00000347635 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
NUP50-201ENST00000347635 TSPY26PQ9H489 355 aa17.83■□□□□ 0.44
NUP50-201ENST00000347635 GNAI3P08754 354 aa17.83■□□□□ 0.44
NUP50-201ENST00000347635 H3BQV1 296 aa17.83■□□□□ 0.44
NUP50-201ENST00000347635 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
NUP50-201ENST00000347635 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
NUP50-201ENST00000347635 KIF3AQ9Y496 699 aa17.82■□□□□ 0.44
NUP50-201ENST00000347635 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
NUP50-201ENST00000347635 IFIT2P09913 472 aaKnown RBP17.81■□□□□ 0.44
NUP50-201ENST00000347635 UBTFL1P0CB47 393 aaPredicted RBP17.81■□□□□ 0.44
NUP50-201ENST00000347635 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
NUP50-201ENST00000347635 C9orf78Q9NZ63 289 aaPredicted RBP17.81■□□□□ 0.44
NUP50-201ENST00000347635 CDK11BP21127 795 aaKnown RBP17.81■□□□□ 0.44
NUP50-201ENST00000347635 RIMS2Q9UQ26 1411 aa17.81■□□□□ 0.44
NUP50-201ENST00000347635 GNAI2P04899 355 aa17.81■□□□□ 0.44
NUP50-201ENST00000347635 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
NUP50-201ENST00000347635 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
NUP50-201ENST00000347635 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
NUP50-201ENST00000347635 MAP7D2Q96T17 732 aa17.8■□□□□ 0.44
NUP50-201ENST00000347635 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
NUP50-201ENST00000347635 PHF8Q9UPP1 1060 aa17.8■□□□□ 0.44
NUP50-201ENST00000347635 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
NUP50-201ENST00000347635 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
NUP50-201ENST00000347635 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
NUP50-201ENST00000347635 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
NUP50-201ENST00000347635 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
NUP50-201ENST00000347635 GOLGA6L19H0YKK7 550 aa17.79■□□□□ 0.44
NUP50-201ENST00000347635 LETM1O95202 739 aaPredicted RBP17.79■□□□□ 0.44
NUP50-201ENST00000347635 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
NUP50-201ENST00000347635 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
NUP50-201ENST00000347635 FAM184AQ8NB25 1140 aa17.79■□□□□ 0.44
NUP50-201ENST00000347635 IL16Q14005 1332 aa17.79■□□□□ 0.44
NUP50-201ENST00000347635 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
NUP50-201ENST00000347635 PRKCSHP14314 528 aaPredicted RBP17.78■□□□□ 0.44
NUP50-201ENST00000347635 BMP2KLQ5H9B9 411 aa17.78■□□□□ 0.44
NUP50-201ENST00000347635 SULT6B1Q6IMI4 303 aa17.78■□□□□ 0.44
NUP50-201ENST00000347635 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
NUP50-201ENST00000347635 MTERF4Q7Z6M4 381 aaKnown RBP17.78■□□□□ 0.44
NUP50-201ENST00000347635 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
NUP50-201ENST00000347635 THUMPD2Q9BTF0 503 aaKnown RBP17.78■□□□□ 0.44
NUP50-201ENST00000347635 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
NUP50-201ENST00000347635 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
NUP50-201ENST00000347635 PRDM11Q9NQV5 511 aa17.77■□□□□ 0.44
NUP50-201ENST00000347635 LRRFIP1Q32MZ4 808 aaKnown RBP17.77■□□□□ 0.44
NUP50-201ENST00000347635 RNF20Q5VTR2 975 aa17.77■□□□□ 0.44
NUP50-201ENST00000347635 CHD1O14646 1710 aa17.77■□□□□ 0.43
NUP50-201ENST00000347635 SEC24BO95487 1268 aa17.77■□□□□ 0.43
NUP50-201ENST00000347635 LRRCC1Q9C099 1032 aa17.77■□□□□ 0.43
NUP50-201ENST00000347635 NPC1L1Q9UHC9 1359 aa17.76■□□□□ 0.43
NUP50-201ENST00000347635 RRP9O43818 475 aaKnown RBP17.76■□□□□ 0.43
NUP50-201ENST00000347635 NUCB1Q02818 461 aa17.76■□□□□ 0.43
NUP50-201ENST00000347635 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
NUP50-201ENST00000347635 ZSCAN30Q86W11 494 aa17.76■□□□□ 0.43
NUP50-201ENST00000347635 RLBP1P12271 317 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 SSFA2P28290 1259 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 ANKRD36BQ8N2N9 1353 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 BECN2A8MW95 431 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 MAST1Q9Y2H9 1570 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 TNNQ9UQP3 1299 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
NUP50-201ENST00000347635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.74■□□□□ 0.43
NUP50-201ENST00000347635 TBC1D9Q6ZT07 1266 aa17.74■□□□□ 0.43
NUP50-201ENST00000347635 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
NUP50-201ENST00000347635 G3V3G9 751 aa17.74■□□□□ 0.43
NUP50-201ENST00000347635 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
NUP50-201ENST00000347635 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
NUP50-201ENST00000347635 DCAF8Q5TAQ9 597 aa17.74■□□□□ 0.43
NUP50-201ENST00000347635 SF3A1Q15459 793 aaKnown RBP17.74■□□□□ 0.43
NUP50-201ENST00000347635 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
NUP50-201ENST00000347635 MBD5Q9P267 1494 aa17.74■□□□□ 0.43
NUP50-201ENST00000347635 MYO5CQ9NQX4 1742 aa17.73■□□□□ 0.43
NUP50-201ENST00000347635 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.43
NUP50-201ENST00000347635 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
NUP50-201ENST00000347635 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
NUP50-201ENST00000347635 TPM3P06753 285 aa17.72■□□□□ 0.43
NUP50-201ENST00000347635 CHMP4CQ96CF2 233 aa17.72■□□□□ 0.43
NUP50-201ENST00000347635 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
NUP50-201ENST00000347635 ZNF530Q6P9A1 599 aaPredicted RBP17.72■□□□□ 0.43
NUP50-201ENST00000347635 STRN4Q9NRL3 753 aa17.72■□□□□ 0.43
NUP50-201ENST00000347635 ZFYVE16Q7Z3T8 1539 aa17.71■□□□□ 0.43
NUP50-201ENST00000347635 SASS6Q6UVJ0 657 aa17.71■□□□□ 0.43
NUP50-201ENST00000347635 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
NUP50-201ENST00000347635 SRCIN1Q9C0H9 1055 aa17.71■□□□□ 0.42
NUP50-201ENST00000347635 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
NUP50-201ENST00000347635 SNX21Q969T3 373 aa17.69■□□□□ 0.42
NUP50-201ENST00000347635 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
NUP50-201ENST00000347635 PSMA5P28066 241 aa17.69■□□□□ 0.42
NUP50-201ENST00000347635 SMARCA5O60264 1052 aaPredicted RBP17.68■□□□□ 0.42
NUP50-201ENST00000347635 MAGI2Q86UL8 1455 aa17.68■□□□□ 0.42
NUP50-201ENST00000347635 SYCE3A1L190 88 aa17.68■□□□□ 0.42
NUP50-201ENST00000347635 FIBPO43427 364 aa17.68■□□□□ 0.42
NUP50-201ENST00000347635 TTC21BQ7Z4L5 1316 aa17.68■□□□□ 0.42
NUP50-201ENST00000347635 CLASRPQ8N2M8 674 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms