RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
TSPAN4-201ENST00000346501 BARGINQ6ZT62 677 aa21.82■■□□□ 1.08
TSPAN4-201ENST00000346501 COL5A2P05997 1499 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-201ENST00000346501 CRB1P82279 1406 aa21.81■■□□□ 1.08
TSPAN4-201ENST00000346501 PDE3BQ13370 1112 aa21.79■■□□□ 1.08
TSPAN4-201ENST00000346501 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
TSPAN4-201ENST00000346501 NFAT5O94916 1531 aa21.78■■□□□ 1.08
TSPAN4-201ENST00000346501 OVOS2A0A0J9YW53 1432 aa21.78■■□□□ 1.08
TSPAN4-201ENST00000346501 OVOS2Q6IE36 1432 aa21.78■■□□□ 1.08
TSPAN4-201ENST00000346501 USP54Q70EL1 1684 aa21.78■■□□□ 1.08
TSPAN4-201ENST00000346501 ABCC6O95255 1503 aa21.77■■□□□ 1.08
TSPAN4-201ENST00000346501 AXIN2Q9Y2T1 843 aa21.77■■□□□ 1.08
TSPAN4-201ENST00000346501 CDCA7Q9BWT1 371 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-201ENST00000346501 BRWD3Q6RI45 1802 aa21.76■■□□□ 1.07
TSPAN4-201ENST00000346501 FYB1O15117 783 aa21.75■■□□□ 1.07
TSPAN4-201ENST00000346501 AMPHP49418 695 aa21.75■■□□□ 1.07
TSPAN4-201ENST00000346501 GGNBP2Q9H3C7 697 aa21.75■■□□□ 1.07
TSPAN4-201ENST00000346501 BLMP54132 1417 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-201ENST00000346501 CGNL1Q0VF96 1302 aa21.74■■□□□ 1.07
TSPAN4-201ENST00000346501 CARD10Q9BWT7 1032 aa21.73■■□□□ 1.07
TSPAN4-201ENST00000346501 NSD3Q9BZ95 1437 aa21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 COL18A1P39060 1754 aa21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 C11orf95C9JLR9 678 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 FAM196AQ6ZSG2 479 aa21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 NLRP2Q9NX02 1062 aa21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 THSD7AQ9UPZ6 1657 aa21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
TSPAN4-201ENST00000346501 IP6K1Q92551 441 aa21.71■■□□□ 1.07
TSPAN4-201ENST00000346501 ANKRD24Q8TF21 1146 aa21.7■■□□□ 1.06
TSPAN4-201ENST00000346501 ERBB3P21860 1342 aa21.7■■□□□ 1.06
TSPAN4-201ENST00000346501 MYOM1P52179 1685 aa21.69■■□□□ 1.06
TSPAN4-201ENST00000346501 LTN1O94822 1766 aa21.69■■□□□ 1.06
TSPAN4-201ENST00000346501 DDB1Q16531 1140 aa21.69■■□□□ 1.06
TSPAN4-201ENST00000346501 CARD14Q9BXL6 1004 aa21.69■■□□□ 1.06
TSPAN4-201ENST00000346501 BAG6P46379 1132 aa21.68■■□□□ 1.06
TSPAN4-201ENST00000346501 MAP3K19Q56UN5 1328 aa21.68■■□□□ 1.06
TSPAN4-201ENST00000346501 RGPD5Q99666 1765 aa21.67■■□□□ 1.06
TSPAN4-201ENST00000346501 FAM182BQ5T319 152 aa21.67■■□□□ 1.06
TSPAN4-201ENST00000346501 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-201ENST00000346501 PANK3Q9H999 370 aa21.66■■□□□ 1.06
TSPAN4-201ENST00000346501 KIF20BQ96Q89 1820 aa21.66■■□□□ 1.06
TSPAN4-201ENST00000346501 RTL1A6NKG5 1358 aa21.65■■□□□ 1.06
TSPAN4-201ENST00000346501 EXOC5O00471 708 aa21.65■■□□□ 1.06
TSPAN4-201ENST00000346501 HOXC9P31274 260 aa21.65■■□□□ 1.06
TSPAN4-201ENST00000346501 RRS1Q15050 365 aaKnown RBP21.64■■□□□ 1.05
TSPAN4-201ENST00000346501 SMG6Q86US8 1419 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-201ENST00000346501 KNSTRNQ9Y448 316 aa21.63■■□□□ 1.05
TSPAN4-201ENST00000346501 IL2RBP14784 551 aa21.62■■□□□ 1.05
TSPAN4-201ENST00000346501 PARP4Q9UKK3 1724 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-201ENST00000346501 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
TSPAN4-201ENST00000346501 FBLN1P23142 703 aa21.61■■□□□ 1.05
TSPAN4-201ENST00000346501 TRIM37O94972 964 aa21.6■■□□□ 1.05
TSPAN4-201ENST00000346501 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
TSPAN4-201ENST00000346501 FLT4P35916 1363 aa21.6■■□□□ 1.05
TSPAN4-201ENST00000346501 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
TSPAN4-201ENST00000346501 PPM1GO15355 546 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-201ENST00000346501 DEFB132Q7Z7B7 95 aa21.59■■□□□ 1.05
TSPAN4-201ENST00000346501 NSD2O96028 1365 aa21.59■■□□□ 1.05
TSPAN4-201ENST00000346501 RGPD1P0DJD0 1748 aa21.58■■□□□ 1.05
TSPAN4-201ENST00000346501 FAM208AQ9UK61 1670 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-201ENST00000346501 APBA3O96018 575 aa21.56■■□□□ 1.04
TSPAN4-201ENST00000346501 INSRP06213 1382 aa21.56■■□□□ 1.04
TSPAN4-201ENST00000346501 DISP2A7MBM2 1401 aa21.55■■□□□ 1.04
TSPAN4-201ENST00000346501 MORC1Q86VD1 984 aa21.55■■□□□ 1.04
TSPAN4-201ENST00000346501 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
TSPAN4-201ENST00000346501 TNNT2P45379 298 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-201ENST00000346501 WNK3Q9BYP7 1800 aa21.54■■□□□ 1.04
TSPAN4-201ENST00000346501 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
TSPAN4-201ENST00000346501 RAPGEF4Q8WZA2 1011 aa21.53■■□□□ 1.04
TSPAN4-201ENST00000346501 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
TSPAN4-201ENST00000346501 TNS2Q63HR2 1409 aa21.53■■□□□ 1.04
TSPAN4-201ENST00000346501 EN1Q05925 392 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-201ENST00000346501 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-201ENST00000346501 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
TSPAN4-201ENST00000346501 EP400Q96L91 3159 aa21.49■■□□□ 1.03
TSPAN4-201ENST00000346501 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
TSPAN4-201ENST00000346501 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
TSPAN4-201ENST00000346501 ANKRD26Q9UPS8 1709 aa21.49■■□□□ 1.03
TSPAN4-201ENST00000346501 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-201ENST00000346501 NBPF6Q5VWK0 638 aa21.48■■□□□ 1.03
TSPAN4-201ENST00000346501 NBPF4Q96M43 638 aa21.48■■□□□ 1.03
TSPAN4-201ENST00000346501 BCL11BQ9C0K0 894 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-201ENST00000346501 BCL9O00512 1426 aa21.47■■□□□ 1.03
TSPAN4-201ENST00000346501 DDX54Q8TDD1 881 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-201ENST00000346501 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-201ENST00000346501 MAP2P11137 1827 aaKnown RBP21.45■■□□□ 1.03
TSPAN4-201ENST00000346501 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-201ENST00000346501 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
TSPAN4-201ENST00000346501 TNS1Q9HBL0 1735 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-201ENST00000346501 CAMKK2Q96RR4 588 aa21.44■■□□□ 1.02
TSPAN4-201ENST00000346501 NBPF14Q5TI25 921 aa21.43■■□□□ 1.02
TSPAN4-201ENST00000346501 PEAK1Q9H792 1746 aa21.43■■□□□ 1.02
TSPAN4-201ENST00000346501 PLSCR1O15162 318 aa21.42■■□□□ 1.02
TSPAN4-201ENST00000346501 AMER1Q5JTC6 1135 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-201ENST00000346501 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
TSPAN4-201ENST00000346501 RGPD2P0DJD1 1756 aa21.39■■□□□ 1.01
TSPAN4-201ENST00000346501 CC2D1BQ5T0F9 858 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-201ENST00000346501 KAT6BQ8WYB5 2073 aa21.38■■□□□ 1.01
TSPAN4-201ENST00000346501 PCDH11XQ9BZA7 1347 aa21.38■■□□□ 1.01
TSPAN4-201ENST00000346501 PCDH11YQ9BZA8 1340 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms