RNA–Protein interactions for RNA: ENST00000345425.6

GIPC1-201, Transcript of GIPC PDZ domain containing family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIPC1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-201ENST00000345425 LRP6O75581 1613 aa37.38■■■■□ 3.58
GIPC1-201ENST00000345425 COL14A1Q05707 1796 aaKnown RBP37.38■■■■□ 3.57
GIPC1-201ENST00000345425 CHRNA2Q15822 529 aa37.38■■■■□ 3.57
GIPC1-201ENST00000345425 COL18A1P39060 1754 aa37.37■■■■□ 3.57
GIPC1-201ENST00000345425 BLMP54132 1417 aaPredicted RBP37.36■■■■□ 3.57
GIPC1-201ENST00000345425 FAM83GA6ND36 823 aa37.35■■■■□ 3.57
GIPC1-201ENST00000345425 INSRP06213 1382 aa37.35■■■■□ 3.57
GIPC1-201ENST00000345425 LMO7Q8WWI1 1683 aa37.33■■■■□ 3.57
GIPC1-201ENST00000345425 HSP90AB2PQ58FF8 381 aa37.32■■■■□ 3.57
GIPC1-201ENST00000345425 CCER2I3L3R5 266 aa37.32■■■■□ 3.56
GIPC1-201ENST00000345425 MEX3CQ5U5Q3 659 aaKnown RBP37.32■■■■□ 3.56
GIPC1-201ENST00000345425 AXIN2Q9Y2T1 843 aa37.3■■■■□ 3.56
GIPC1-201ENST00000345425 RGPD5Q99666 1765 aa37.29■■■■□ 3.56
GIPC1-201ENST00000345425 COL3A1P02461 1466 aaPredicted RBP37.28■■■■□ 3.56
GIPC1-201ENST00000345425 PLCH1Q4KWH8 1693 aa37.27■■■■□ 3.56
GIPC1-201ENST00000345425 MRS2Q9HD23 443 aa37.27■■■■□ 3.56
GIPC1-201ENST00000345425 CAMTA1Q9Y6Y1 1673 aa37.27■■■■□ 3.56
GIPC1-201ENST00000345425 C8orf37Q96NL8 207 aa37.27■■■■□ 3.56
GIPC1-201ENST00000345425 DIAPH1O60610 1272 aaKnown RBP37.26■■■■□ 3.56
GIPC1-201ENST00000345425 ILDR1Q86SU0 546 aaPredicted RBP37.25■■■■□ 3.55
GIPC1-201ENST00000345425 NGLY1Q96IV0 654 aa37.24■■■■□ 3.55
GIPC1-201ENST00000345425 BTG4Q9NY30 223 aa37.24■■■■□ 3.55
GIPC1-201ENST00000345425 NWD2Q9ULI1 1742 aa37.24■■■■□ 3.55
GIPC1-201ENST00000345425 ERBB3P21860 1342 aa37.23■■■■□ 3.55
GIPC1-201ENST00000345425 COL5A2P05997 1499 aaPredicted RBP37.22■■■■□ 3.55
GIPC1-201ENST00000345425 EIF4A2Q14240 407 aaKnown RBP37.22■■■■□ 3.55
GIPC1-201ENST00000345425 CCDC184Q52MB2 194 aa37.22■■■■□ 3.55
GIPC1-201ENST00000345425 ANKRD24Q8TF21 1146 aa37.22■■■■□ 3.55
GIPC1-201ENST00000345425 SLIT2O94813 1529 aa37.22■■■■□ 3.55
GIPC1-201ENST00000345425 LTV1Q96GA3 475 aaPredicted RBP37.21■■■■□ 3.55
GIPC1-201ENST00000345425 NUDCQ9Y266 331 aa37.2■■■■□ 3.55
GIPC1-201ENST00000345425 IL13P35225 146 aa37.19■■■■□ 3.54
GIPC1-201ENST00000345425 EVA1CP58658 441 aa37.19■■■■□ 3.54
GIPC1-201ENST00000345425 FAM208AQ9UK61 1670 aaKnown RBP37.18■■■■□ 3.54
GIPC1-201ENST00000345425 FNBP4Q8N3X1 1017 aaPredicted RBP37.17■■■■□ 3.54
GIPC1-201ENST00000345425 CSB-PGBD3P0DP91 1061 aa37.17■■■■□ 3.54
GIPC1-201ENST00000345425 NRAPQ86VF7 1730 aa37.16■■■■□ 3.54
GIPC1-201ENST00000345425 WDR17Q8IZU2 1322 aa37.15■■■■□ 3.54
GIPC1-201ENST00000345425 STRN4Q9NRL3 753 aa37.15■■■■□ 3.54
GIPC1-201ENST00000345425 U2SURPO15042 1029 aaKnown RBP37.12■■■■□ 3.53
GIPC1-201ENST00000345425 UNC5CLQ8IV45 518 aa37.12■■■■□ 3.53
GIPC1-201ENST00000345425 WDR43Q15061 677 aaKnown RBP eCLIP37.11■■■■□ 3.53
GIPC1-201ENST00000345425 AFF2P51816 1311 aa37.1■■■■□ 3.53
GIPC1-201ENST00000345425 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.1■■■■□ 3.53
GIPC1-201ENST00000345425 BCL9LQ86UU0 1499 aa37.1■■■■□ 3.53
GIPC1-201ENST00000345425 RGPD1P0DJD0 1748 aa37.1■■■■□ 3.53
GIPC1-201ENST00000345425 USP21Q9UK80 565 aa37.09■■■■□ 3.53
GIPC1-201ENST00000345425 TOM1L2Q6ZVM7 507 aa37.09■■■■□ 3.53
GIPC1-201ENST00000345425 PNISRQ8TF01 805 aaKnown RBP37.08■■■■□ 3.53
GIPC1-201ENST00000345425 EYA1Q99502 592 aa37.08■■■■□ 3.53
GIPC1-201ENST00000345425 NLRP2Q9NX02 1062 aa37.08■■■■□ 3.53
GIPC1-201ENST00000345425 IGSF1Q8N6C5 1336 aa37.08■■■■□ 3.53
GIPC1-201ENST00000345425 LARP1Q6PKG0 1096 aaKnown RBP37.07■■■■□ 3.53
GIPC1-201ENST00000345425 CRB1P82279 1406 aa37.07■■■■□ 3.52
GIPC1-201ENST00000345425 RGPD2P0DJD1 1756 aa37.07■■■■□ 3.52
GIPC1-201ENST00000345425 U2AF1L5P0DN76 240 aaPredicted RBP37.06■■■■□ 3.52
GIPC1-201ENST00000345425 U2AF1Q01081 240 aaKnown RBP eCLIP37.06■■■■□ 3.52
GIPC1-201ENST00000345425 NBPF6Q5VWK0 638 aa37.06■■■■□ 3.52
GIPC1-201ENST00000345425 NBPF4Q96M43 638 aa37.06■■■■□ 3.52
GIPC1-201ENST00000345425 CARD10Q9BWT7 1032 aa37.02■■■■□ 3.52
GIPC1-201ENST00000345425 NCAPD2Q15021 1401 aa37.01■■■■□ 3.51
GIPC1-201ENST00000345425 VPS72Q15906 364 aa36.99■■■■□ 3.51
GIPC1-201ENST00000345425 SULT6B1Q6IMI4 303 aa36.99■■■■□ 3.51
GIPC1-201ENST00000345425 KDRP35968 1356 aa36.98■■■■□ 3.51
GIPC1-201ENST00000345425 FAM9BQ8IZU0 186 aa36.98■■■■□ 3.51
GIPC1-201ENST00000345425 USHBP1Q8N6Y0 703 aa36.98■■■■□ 3.51
GIPC1-201ENST00000345425 ADAMTS8Q9UP79 889 aa36.98■■■■□ 3.51
GIPC1-201ENST00000345425 CCDC9Q9Y3X0 531 aaKnown RBP36.97■■■■□ 3.51
GIPC1-201ENST00000345425 HMOX1P09601 288 aa36.96■■■■□ 3.51
GIPC1-201ENST00000345425 ZNF772Q68DY9 489 aaPredicted RBP36.96■■■■□ 3.51
GIPC1-201ENST00000345425 FCHSD2O94868 740 aa36.96■■■■□ 3.51
GIPC1-201ENST00000345425 SPATA31A5Q5VU36 1347 aa36.95■■■■□ 3.51
GIPC1-201ENST00000345425 SPATA31A7Q8IWB4 1347 aa36.95■■■■□ 3.51
GIPC1-201ENST00000345425 PNNQ9H307 717 aaKnown RBP36.95■■■■□ 3.51
GIPC1-201ENST00000345425 TRPC5Q9UL62 973 aaPredicted RBP36.95■■■■□ 3.51
GIPC1-201ENST00000345425 SPATA31A1Q5TZJ5 1347 aa36.94■■■■□ 3.5
GIPC1-201ENST00000345425 USP35Q9P2H5 1018 aa36.94■■■■□ 3.5
GIPC1-201ENST00000345425 AEBP1Q8IUX7 1158 aa36.94■■■■□ 3.5
GIPC1-201ENST00000345425 ATRNO75882 1429 aa36.93■■■■□ 3.5
GIPC1-201ENST00000345425 THRAP3Q9Y2W1 955 aaKnown RBP36.92■■■■□ 3.5
GIPC1-201ENST00000345425 TCP11L2Q8N4U5 519 aa36.91■■■■□ 3.5
GIPC1-201ENST00000345425 RSPH6AQ9H0K4 717 aa36.91■■■■□ 3.5
GIPC1-201ENST00000345425 RAPGEF4Q8WZA2 1011 aa36.89■■■■□ 3.5
GIPC1-201ENST00000345425 PHF23Q9BUL5 403 aaPredicted RBP36.89■■■■□ 3.5
GIPC1-201ENST00000345425 QTRT2Q9H974 415 aaKnown RBP36.89■■■■□ 3.5
GIPC1-201ENST00000345425 PRKAR2BP31323 418 aa36.87■■■■□ 3.49
GIPC1-201ENST00000345425 NEFMP07197 916 aa36.86■■■■□ 3.49
GIPC1-201ENST00000345425 GJD4Q96KN9 370 aaPredicted RBP36.86■■■■□ 3.49
GIPC1-201ENST00000345425 PLEKHG2Q9H7P9 1386 aa36.85■■■■□ 3.49
GIPC1-201ENST00000345425 IL2RBP14784 551 aa36.84■■■■□ 3.49
GIPC1-201ENST00000345425 PARP4Q9UKK3 1724 aaKnown RBP36.84■■■■□ 3.49
GIPC1-201ENST00000345425 TATP17735 454 aaPredicted RBP36.83■■■■□ 3.49
GIPC1-201ENST00000345425 BARGINQ6ZT62 677 aa36.83■■■■□ 3.49
GIPC1-201ENST00000345425 WNK3Q9BYP7 1800 aa36.83■■■■□ 3.49
GIPC1-201ENST00000345425 CDCA7Q9BWT1 371 aaPredicted RBP36.83■■■■□ 3.49
GIPC1-201ENST00000345425 PLEKHF1Q96S99 279 aa36.82■■■■□ 3.48
GIPC1-201ENST00000345425 MEGF6O75095 1541 aa36.82■■■■□ 3.48
GIPC1-201ENST00000345425 MAPK8IP3Q9UPT6 1336 aa36.81■■■■□ 3.48
GIPC1-201ENST00000345425 RUNDC1Q96C34 613 aa36.81■■■■□ 3.48
GIPC1-201ENST00000345425 GLI3P10071 1580 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms