RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
CEACAM1-202ENST00000344391 RGPD1P0DJD0 1748 aa21.66■■□□□ 1.06
CEACAM1-202ENST00000344391 CERKQ8TCT0 537 aa21.66■■□□□ 1.06
CEACAM1-202ENST00000344391 CABLES1Q8TDN4 633 aa21.66■■□□□ 1.06
CEACAM1-202ENST00000344391 UBAP1LF5GYI3 381 aa21.65■■□□□ 1.06
CEACAM1-202ENST00000344391 FCHSD2O94868 740 aa21.65■■□□□ 1.06
CEACAM1-202ENST00000344391 APAF1O14727 1248 aa21.64■■□□□ 1.05
CEACAM1-202ENST00000344391 PLEKHF1Q96S99 279 aa21.64■■□□□ 1.05
CEACAM1-202ENST00000344391 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
CEACAM1-202ENST00000344391 ABCA3Q99758 1704 aa21.63■■□□□ 1.05
CEACAM1-202ENST00000344391 PHLPP1O60346 1717 aa21.63■■□□□ 1.05
CEACAM1-202ENST00000344391 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
CEACAM1-202ENST00000344391 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
CEACAM1-202ENST00000344391 SALL2Q9Y467 1007 aaPredicted RBP21.62■■□□□ 1.05
CEACAM1-202ENST00000344391 ZBTB7CA1YPR0 619 aa21.62■■□□□ 1.05
CEACAM1-202ENST00000344391 ZC3H6P61129 1189 aaKnown RBP21.62■■□□□ 1.05
CEACAM1-202ENST00000344391 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
CEACAM1-202ENST00000344391 COL18A1P39060 1754 aa21.6■■□□□ 1.05
CEACAM1-202ENST00000344391 COL16A1Q07092 1604 aaPredicted RBP21.6■■□□□ 1.05
CEACAM1-202ENST00000344391 CPDO75976 1380 aa21.6■■□□□ 1.05
CEACAM1-202ENST00000344391 HMOX1P09601 288 aa21.6■■□□□ 1.05
CEACAM1-202ENST00000344391 TCP11L2Q8N4U5 519 aa21.6■■□□□ 1.05
CEACAM1-202ENST00000344391 NGEFQ8N5V2 710 aa21.59■■□□□ 1.05
CEACAM1-202ENST00000344391 RGPD5Q99666 1765 aa21.59■■□□□ 1.05
CEACAM1-202ENST00000344391 PRKAR2BP31323 418 aa21.58■■□□□ 1.05
CEACAM1-202ENST00000344391 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
CEACAM1-202ENST00000344391 ABCC6O95255 1503 aa21.58■■□□□ 1.05
CEACAM1-202ENST00000344391 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.04
CEACAM1-202ENST00000344391 EYA1Q99502 592 aa21.58■■□□□ 1.04
CEACAM1-202ENST00000344391 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
CEACAM1-202ENST00000344391 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
CEACAM1-202ENST00000344391 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
CEACAM1-202ENST00000344391 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
CEACAM1-202ENST00000344391 KIAA0232Q92628 1395 aa21.56■■□□□ 1.04
CEACAM1-202ENST00000344391 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
CEACAM1-202ENST00000344391 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
CEACAM1-202ENST00000344391 ZNF521Q96K83 1311 aa21.56■■□□□ 1.04
CEACAM1-202ENST00000344391 KDRP35968 1356 aa21.55■■□□□ 1.04
CEACAM1-202ENST00000344391 RGPD2P0DJD1 1756 aa21.54■■□□□ 1.04
CEACAM1-202ENST00000344391 PDE3BQ13370 1112 aa21.54■■□□□ 1.04
CEACAM1-202ENST00000344391 NEFMP07197 916 aa21.53■■□□□ 1.04
CEACAM1-202ENST00000344391 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
CEACAM1-202ENST00000344391 PHACTR3Q96KR7 559 aa21.53■■□□□ 1.04
CEACAM1-202ENST00000344391 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
CEACAM1-202ENST00000344391 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.04
CEACAM1-202ENST00000344391 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
CEACAM1-202ENST00000344391 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
CEACAM1-202ENST00000344391 NEUROD2Q15784 382 aa21.51■■□□□ 1.03
CEACAM1-202ENST00000344391 CHRNA2Q15822 529 aa21.51■■□□□ 1.03
CEACAM1-202ENST00000344391 CCDC27Q2M243 656 aa21.51■■□□□ 1.03
CEACAM1-202ENST00000344391 NBPF6Q5VWK0 638 aa21.51■■□□□ 1.03
CEACAM1-202ENST00000344391 NBPF4Q96M43 638 aa21.51■■□□□ 1.03
CEACAM1-202ENST00000344391 ERBB3P21860 1342 aa21.5■■□□□ 1.03
CEACAM1-202ENST00000344391 LMO7Q8WWI1 1683 aa21.5■■□□□ 1.03
CEACAM1-202ENST00000344391 CAMTA1Q9Y6Y1 1673 aa21.5■■□□□ 1.03
CEACAM1-202ENST00000344391 PRDM11Q9NQV5 511 aa21.5■■□□□ 1.03
CEACAM1-202ENST00000344391 WWC1Q8IX03 1113 aa21.49■■□□□ 1.03
CEACAM1-202ENST00000344391 NCAPD2Q15021 1401 aa21.48■■□□□ 1.03
CEACAM1-202ENST00000344391 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
CEACAM1-202ENST00000344391 CDCA7LQ96GN5 454 aa21.47■■□□□ 1.03
CEACAM1-202ENST00000344391 DLG5Q8TDM6 1919 aa21.47■■□□□ 1.03
CEACAM1-202ENST00000344391 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
CEACAM1-202ENST00000344391 RIPK4P57078 832 aa21.47■■□□□ 1.03
CEACAM1-202ENST00000344391 GOLGA2Q08379 1002 aa21.47■■□□□ 1.03
CEACAM1-202ENST00000344391 USHBP1Q8N6Y0 703 aa21.46■■□□□ 1.03
CEACAM1-202ENST00000344391 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
CEACAM1-202ENST00000344391 FAM83GA6ND36 823 aa21.44■■□□□ 1.02
CEACAM1-202ENST00000344391 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
CEACAM1-202ENST00000344391 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
CEACAM1-202ENST00000344391 COL14A1Q05707 1796 aaKnown RBP21.42■■□□□ 1.02
CEACAM1-202ENST00000344391 COL5A2P05997 1499 aaPredicted RBP21.41■■□□□ 1.02
CEACAM1-202ENST00000344391 CSB-PGBD3P0DP91 1061 aa21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 NLRP2Q9NX02 1062 aa21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 JCADQ9P266 1359 aa21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 E9PSI1 815 aa21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 MTHFSDQ2M296 383 aaKnown RBP21.4■■□□□ 1.02
CEACAM1-202ENST00000344391 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
CEACAM1-202ENST00000344391 DUSP27Q5VZP5 1158 aa21.38■■□□□ 1.01
CEACAM1-202ENST00000344391 GAS2L2Q8NHY3 880 aa21.38■■□□□ 1.01
CEACAM1-202ENST00000344391 IL16Q14005 1332 aa21.36■■□□□ 1.01
CEACAM1-202ENST00000344391 BTG4Q9NY30 223 aa21.35■■□□□ 1.01
CEACAM1-202ENST00000344391 PLCH1Q4KWH8 1693 aa21.34■■□□□ 1.01
CEACAM1-202ENST00000344391 NUTM2BA6NNL0 878 aaPredicted RBP21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 NUTM2EB1AL46 878 aaPredicted RBP21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 ADAMTS2O95450 1211 aa21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 HSPA1LP34931 641 aa21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 EVA1CP58658 441 aa21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 TOM1L2Q6ZVM7 507 aa21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 NUTM2AQ8IVF1 878 aaPredicted RBP21.33■■□□□ 1.01
CEACAM1-202ENST00000344391 AMOTQ4VCS5 1084 aa21.33■■□□□ 1
CEACAM1-202ENST00000344391 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1
CEACAM1-202ENST00000344391 STRN4Q9NRL3 753 aa21.33■■□□□ 1
CEACAM1-202ENST00000344391 PLEKHG2Q9H7P9 1386 aa21.32■■□□□ 1
CEACAM1-202ENST00000344391 CALD1Q05682 793 aaKnown RBP21.32■■□□□ 1
CEACAM1-202ENST00000344391 LARP1Q6PKG0 1096 aaKnown RBP21.32■■□□□ 1
CEACAM1-202ENST00000344391 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
CEACAM1-202ENST00000344391 THUMPD2Q9BTF0 503 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms