RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 KTN1Q86UP2 1357 aaKnown RBP25.24■■□□□ 1.63
USF2-202ENST00000343550 TOM1L2Q6ZVM7 507 aa25.24■■□□□ 1.63
USF2-202ENST00000343550 R3HDM1Q15032 1099 aaKnown RBP25.23■■□□□ 1.63
USF2-202ENST00000343550 SOX12O15370 315 aa25.22■■□□□ 1.63
USF2-202ENST00000343550 AKAP12Q02952 1782 aa25.22■■□□□ 1.63
USF2-202ENST00000343550 TMF1P82094 1093 aa25.22■■□□□ 1.63
USF2-202ENST00000343550 PARD3Q8TEW0 1356 aa25.21■■□□□ 1.63
USF2-202ENST00000343550 SLC12A5Q9H2X9 1139 aa25.21■■□□□ 1.63
USF2-202ENST00000343550 WDR17Q8IZU2 1322 aa25.21■■□□□ 1.63
USF2-202ENST00000343550 COL18A1P39060 1754 aa25.2■■□□□ 1.62
USF2-202ENST00000343550 C11orf95C9JLR9 678 aaPredicted RBP25.2■■□□□ 1.62
USF2-202ENST00000343550 TMC1Q8TDI8 760 aa25.2■■□□□ 1.62
USF2-202ENST00000343550 EIF4G2P78344 907 aaKnown RBP eCLIP25.19■■□□□ 1.62
USF2-202ENST00000343550 PARP4Q9UKK3 1724 aaKnown RBP25.19■■□□□ 1.62
USF2-202ENST00000343550 LRP5O75197 1615 aa25.18■■□□□ 1.62
USF2-202ENST00000343550 DDB1Q16531 1140 aa25.17■■□□□ 1.62
USF2-202ENST00000343550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.17■■□□□ 1.62
USF2-202ENST00000343550 CSB-PGBD3P0DP91 1061 aa25.16■■□□□ 1.62
USF2-202ENST00000343550 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
USF2-202ENST00000343550 CDCA7Q9BWT1 371 aaPredicted RBP25.15■■□□□ 1.62
USF2-202ENST00000343550 OVOS2A0A0G2JMS6 1433 aa25.14■■□□□ 1.62
USF2-202ENST00000343550 OVOS2A0A0J9YW53 1432 aa25.14■■□□□ 1.62
USF2-202ENST00000343550 OVOS2Q6IE36 1432 aa25.14■■□□□ 1.62
USF2-202ENST00000343550 CARD10Q9BWT7 1032 aa25.14■■□□□ 1.62
USF2-202ENST00000343550 NFAT5O94916 1531 aa25.14■■□□□ 1.61
USF2-202ENST00000343550 CD163L1Q9NR16 1453 aa25.14■■□□□ 1.61
USF2-202ENST00000343550 CDCA8Q53HL2 280 aa25.13■■□□□ 1.61
USF2-202ENST00000343550 HDGFL2Q7Z4V5 671 aaPredicted RBP25.13■■□□□ 1.61
USF2-202ENST00000343550 USP31Q70CQ4 1352 aa25.13■■□□□ 1.61
USF2-202ENST00000343550 NME9Q86XW9 330 aa25.12■■□□□ 1.61
USF2-202ENST00000343550 MON2Q7Z3U7 1717 aa25.12■■□□□ 1.61
USF2-202ENST00000343550 TERF2IPQ9NYB0 399 aa25.12■■□□□ 1.61
USF2-202ENST00000343550 NBPF14Q5TI25 921 aa25.1■■□□□ 1.61
USF2-202ENST00000343550 LRRC37A3O60309 1634 aa25.1■■□□□ 1.61
USF2-202ENST00000343550 NINLQ9Y2I6 1382 aa25.1■■□□□ 1.61
USF2-202ENST00000343550 MARCH10Q8NA82 808 aaPredicted RBP25.09■■□□□ 1.61
USF2-202ENST00000343550 PEAK1Q9H792 1746 aa25.09■■□□□ 1.61
USF2-202ENST00000343550 RGPD5Q99666 1765 aa25.08■■□□□ 1.61
USF2-202ENST00000343550 RREB1Q92766 1687 aa25.07■■□□□ 1.6
USF2-202ENST00000343550 BCL11BQ9C0K0 894 aaPredicted RBP25.07■■□□□ 1.6
USF2-202ENST00000343550 A0A1W2PP64 1363 aa25.06■■□□□ 1.6
USF2-202ENST00000343550 EDC4Q6P2E9 1401 aaKnown RBP25.06■■□□□ 1.6
USF2-202ENST00000343550 ABCC6O95255 1503 aa25.06■■□□□ 1.6
USF2-202ENST00000343550 EXOC5O00471 708 aa25.06■■□□□ 1.6
USF2-202ENST00000343550 PLSCR1O15162 318 aa25.06■■□□□ 1.6
USF2-202ENST00000343550 CCDC7Q96M83 1385 aa25.06■■□□□ 1.6
USF2-202ENST00000343550 PTF1AQ7RTS3 328 aa25.05■■□□□ 1.6
USF2-202ENST00000343550 BCL9O00512 1426 aa25.04■■□□□ 1.6
USF2-202ENST00000343550 NUP188Q5SRE5 1749 aa25.03■■□□□ 1.6
USF2-202ENST00000343550 USP54Q70EL1 1684 aa25.02■■□□□ 1.6
USF2-202ENST00000343550 WNK3Q9BYP7 1800 aa25.02■■□□□ 1.6
USF2-202ENST00000343550 ERBB3P21860 1342 aa25.02■■□□□ 1.6
USF2-202ENST00000343550 NLRP2Q9NX02 1062 aa25.02■■□□□ 1.6
USF2-202ENST00000343550 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
USF2-202ENST00000343550 SBF2Q86WG5 1849 aa25■■□□□ 1.59
USF2-202ENST00000343550 ANKRD24Q8TF21 1146 aa24.98■■□□□ 1.59
USF2-202ENST00000343550 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
USF2-202ENST00000343550 IL2RBP14784 551 aa24.96■■□□□ 1.59
USF2-202ENST00000343550 PROM2Q8N271 834 aa24.96■■□□□ 1.59
USF2-202ENST00000343550 TNS2Q63HR2 1409 aa24.96■■□□□ 1.59
USF2-202ENST00000343550 RGPD3A6NKT7 1758 aaPredicted RBP24.95■■□□□ 1.58
USF2-202ENST00000343550 LTN1O94822 1766 aa24.95■■□□□ 1.58
USF2-202ENST00000343550 RGPD4Q7Z3J3 1758 aa24.95■■□□□ 1.58
USF2-202ENST00000343550 IP6K1Q92551 441 aa24.94■■□□□ 1.58
USF2-202ENST00000343550 CARD14Q9BXL6 1004 aa24.94■■□□□ 1.58
USF2-202ENST00000343550 KCNQ2O43526 872 aa24.92■■□□□ 1.58
USF2-202ENST00000343550 COG3Q96JB2 828 aa24.92■■□□□ 1.58
USF2-202ENST00000343550 SPON1Q9HCB6 807 aa24.92■■□□□ 1.58
USF2-202ENST00000343550 ANO8Q9HCE9 1232 aaPredicted RBP24.92■■□□□ 1.58
USF2-202ENST00000343550 MYOM1P52179 1685 aa24.92■■□□□ 1.58
USF2-202ENST00000343550 FYB1O15117 783 aa24.9■■□□□ 1.58
USF2-202ENST00000343550 TXNRD1Q16881 649 aa24.9■■□□□ 1.58
USF2-202ENST00000343550 LTV1Q96GA3 475 aaPredicted RBP24.89■■□□□ 1.57
USF2-202ENST00000343550 ACSBG1Q96GR2 724 aa24.88■■□□□ 1.57
USF2-202ENST00000343550 MAP3K19Q56UN5 1328 aa24.88■■□□□ 1.57
USF2-202ENST00000343550 FBLN1P23142 703 aa24.87■■□□□ 1.57
USF2-202ENST00000343550 AMPHP49418 695 aa24.86■■□□□ 1.57
USF2-202ENST00000343550 PPP1R1BQ9UD71 204 aaPredicted RBP24.86■■□□□ 1.57
USF2-202ENST00000343550 KIF7Q2M1P5 1343 aa24.85■■□□□ 1.57
USF2-202ENST00000343550 HOXC9P31274 260 aa24.85■■□□□ 1.57
USF2-202ENST00000343550 GGNBP2Q9H3C7 697 aa24.85■■□□□ 1.57
USF2-202ENST00000343550 PDGFDQ9GZP0 370 aaPredicted RBP24.84■■□□□ 1.57
USF2-202ENST00000343550 PANK3Q9H999 370 aa24.84■■□□□ 1.57
USF2-202ENST00000343550 STK32BQ9NY57 414 aa24.83■■□□□ 1.57
USF2-202ENST00000343550 NSD3Q9BZ95 1437 aa24.83■■□□□ 1.57
USF2-202ENST00000343550 SLC15A2Q16348 729 aa24.81■■□□□ 1.56
USF2-202ENST00000343550 DDX54Q8TDD1 881 aaKnown RBP24.81■■□□□ 1.56
USF2-202ENST00000343550 NHSQ6T4R5 1651 aa24.81■■□□□ 1.56
USF2-202ENST00000343550 RRS1Q15050 365 aaKnown RBP24.79■■□□□ 1.56
USF2-202ENST00000343550 ZBTB7AO95365 584 aa24.78■■□□□ 1.56
USF2-202ENST00000343550 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
USF2-202ENST00000343550 CGNL1Q0VF96 1302 aa24.77■■□□□ 1.56
USF2-202ENST00000343550 FAM208AQ9UK61 1670 aaKnown RBP24.77■■□□□ 1.56
USF2-202ENST00000343550 RTL1A6NKG5 1358 aa24.76■■□□□ 1.55
USF2-202ENST00000343550 WASHC2AQ641Q2 1341 aa24.76■■□□□ 1.55
USF2-202ENST00000343550 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
USF2-202ENST00000343550 KIF20BQ96Q89 1820 aa24.74■■□□□ 1.55
USF2-202ENST00000343550 NBPF6Q5VWK0 638 aa24.73■■□□□ 1.55
USF2-202ENST00000343550 ZCRB1Q8TBF4 217 aaKnown RBP24.73■■□□□ 1.55
USF2-202ENST00000343550 NBPF4Q96M43 638 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms