RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 STK32BQ9NY57 414 aa26.04■■□□□ 1.76
MUC1-204ENST00000343256 TOM1L2Q6ZVM7 507 aa26.03■■□□□ 1.76
MUC1-204ENST00000343256 TXNRD1Q16881 649 aa26.02■■□□□ 1.76
MUC1-204ENST00000343256 SLC15A2Q16348 729 aa26.01■■□□□ 1.75
MUC1-204ENST00000343256 WNK3Q9BYP7 1800 aa26■■□□□ 1.75
MUC1-204ENST00000343256 AKAP12Q02952 1782 aa25.99■■□□□ 1.75
MUC1-204ENST00000343256 AATKQ6ZMQ8 1374 aa25.98■■□□□ 1.75
MUC1-204ENST00000343256 IFFO2Q5TF58 517 aa25.98■■□□□ 1.75
MUC1-204ENST00000343256 SGIP1Q9BQI5 828 aa25.98■■□□□ 1.75
MUC1-204ENST00000343256 MTFR1LQ9H019 292 aa25.98■■□□□ 1.75
MUC1-204ENST00000343256 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
MUC1-204ENST00000343256 NLRP6P59044 892 aa25.95■■□□□ 1.74
MUC1-204ENST00000343256 AXIN2Q9Y2T1 843 aa25.95■■□□□ 1.74
MUC1-204ENST00000343256 COL18A1P39060 1754 aa25.95■■□□□ 1.74
MUC1-204ENST00000343256 SRPK2P78362 688 aaKnown RBP25.94■■□□□ 1.74
MUC1-204ENST00000343256 BCL9O00512 1426 aa25.94■■□□□ 1.74
MUC1-204ENST00000343256 SLIT3O75094 1523 aa25.93■■□□□ 1.74
MUC1-204ENST00000343256 WDR17Q8IZU2 1322 aa25.93■■□□□ 1.74
MUC1-204ENST00000343256 ARXQ96QS3 562 aa25.93■■□□□ 1.74
MUC1-204ENST00000343256 CABP2Q9NPB3 220 aa25.93■■□□□ 1.74
MUC1-204ENST00000343256 STAC3Q96MF2 364 aa25.92■■□□□ 1.74
MUC1-204ENST00000343256 RAB3GAP2Q9H2M9 1393 aa25.91■■□□□ 1.74
MUC1-204ENST00000343256 CDCA7Q9BWT1 371 aaPredicted RBP25.89■■□□□ 1.74
MUC1-204ENST00000343256 RGPD5Q99666 1765 aa25.88■■□□□ 1.73
MUC1-204ENST00000343256 GPR162Q16538 588 aa25.88■■□□□ 1.73
MUC1-204ENST00000343256 USP6P35125 1406 aa25.88■■□□□ 1.73
MUC1-204ENST00000343256 GIGYF1O75420 1035 aaPredicted RBP25.87■■□□□ 1.73
MUC1-204ENST00000343256 CSB-PGBD3P0DP91 1061 aa25.87■■□□□ 1.73
MUC1-204ENST00000343256 EXOC5O00471 708 aa25.86■■□□□ 1.73
MUC1-204ENST00000343256 ACSBG1Q96GR2 724 aa25.86■■□□□ 1.73
MUC1-204ENST00000343256 CABP1Q9NZU7 370 aa25.86■■□□□ 1.73
MUC1-204ENST00000343256 BRD4O60885 1362 aaPredicted RBP25.85■■□□□ 1.73
MUC1-204ENST00000343256 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
MUC1-204ENST00000343256 SOX12O15370 315 aa25.85■■□□□ 1.73
MUC1-204ENST00000343256 CPSF1Q10570 1443 aaKnown RBP25.85■■□□□ 1.73
MUC1-204ENST00000343256 NBPF1Q3BBV0 1214 aa25.84■■□□□ 1.73
MUC1-204ENST00000343256 KLHL34Q8N239 644 aa25.84■■□□□ 1.73
MUC1-204ENST00000343256 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
MUC1-204ENST00000343256 MAP3K5Q99683 1374 aa25.83■■□□□ 1.73
MUC1-204ENST00000343256 PAPPAQ13219 1627 aa25.82■■□□□ 1.72
MUC1-204ENST00000343256 NHSQ6T4R5 1651 aa25.82■■□□□ 1.72
MUC1-204ENST00000343256 ZNF827Q17R98 1081 aa25.81■■□□□ 1.72
MUC1-204ENST00000343256 ARHGEF25Q86VW2 580 aa25.81■■□□□ 1.72
MUC1-204ENST00000343256 PELP1Q8IZL8 1130 aaKnown RBP25.81■■□□□ 1.72
MUC1-204ENST00000343256 CENPJQ9HC77 1338 aaPredicted RBP25.79■■□□□ 1.72
MUC1-204ENST00000343256 TNS2Q63HR2 1409 aa25.79■■□□□ 1.72
MUC1-204ENST00000343256 KIAA1210Q9ULL0 1709 aa25.78■■□□□ 1.72
MUC1-204ENST00000343256 QRICH2Q9H0J4 1663 aa25.76■■□□□ 1.71
MUC1-204ENST00000343256 SHANK3Q9BYB0 1731 aa25.75■■□□□ 1.71
MUC1-204ENST00000343256 CCDC7Q96M83 1385 aa25.75■■□□□ 1.71
MUC1-204ENST00000343256 LRRC4BQ9NT99 713 aa25.75■■□□□ 1.71
MUC1-204ENST00000343256 BTAF1O14981 1849 aa25.74■■□□□ 1.71
MUC1-204ENST00000343256 TRPM1Q7Z4N2 1603 aa25.74■■□□□ 1.71
MUC1-204ENST00000343256 KCNH5Q8NCM2 988 aa25.74■■□□□ 1.71
MUC1-204ENST00000343256 TTC21BQ7Z4L5 1316 aa25.72■■□□□ 1.71
MUC1-204ENST00000343256 NLGN2Q8NFZ4 835 aa25.71■■□□□ 1.71
MUC1-204ENST00000343256 KAT6BQ8WYB5 2073 aa25.71■■□□□ 1.71
MUC1-204ENST00000343256 CEP350Q5VT06 3117 aa25.7■■□□□ 1.71
MUC1-204ENST00000343256 GOLGB1Q14789 3259 aaKnown RBP25.7■■□□□ 1.71
MUC1-204ENST00000343256 ABCC6O95255 1503 aa25.7■■□□□ 1.7
MUC1-204ENST00000343256 NFAT5O94916 1531 aa25.69■■□□□ 1.7
MUC1-204ENST00000343256 POLD1P28340 1107 aa25.69■■□□□ 1.7
MUC1-204ENST00000343256 AKT1S1Q96B36 256 aa25.69■■□□□ 1.7
MUC1-204ENST00000343256 NLRP2Q9NX02 1062 aa25.66■■□□□ 1.7
MUC1-204ENST00000343256 PNPLA7Q6ZV29 1317 aa25.65■■□□□ 1.7
MUC1-204ENST00000343256 SLC16A10Q8TF71 515 aa25.65■■□□□ 1.7
MUC1-204ENST00000343256 COL24A1Q17RW2 1714 aa25.64■■□□□ 1.7
MUC1-204ENST00000343256 YBX3P16989 372 aaKnown RBP eCLIP25.64■■□□□ 1.7
MUC1-204ENST00000343256 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
MUC1-204ENST00000343256 IL2RBP14784 551 aa25.63■■□□□ 1.69
MUC1-204ENST00000343256 KCNQ4P56696 695 aa25.63■■□□□ 1.69
MUC1-204ENST00000343256 TUBGCP6Q96RT7 1819 aa25.63■■□□□ 1.69
MUC1-204ENST00000343256 ZNF692Q9BU19 519 aaPredicted RBP25.62■■□□□ 1.69
MUC1-204ENST00000343256 ERBB3P21860 1342 aa25.62■■□□□ 1.69
MUC1-204ENST00000343256 EVC2Q86UK5 1308 aa25.62■■□□□ 1.69
MUC1-204ENST00000343256 TTC21AQ8NDW8 1320 aa25.62■■□□□ 1.69
MUC1-204ENST00000343256 TFCP2L1Q9NZI6 479 aa25.6■■□□□ 1.69
MUC1-204ENST00000343256 ATP10DQ9P241 1426 aa25.58■■□□□ 1.69
MUC1-204ENST00000343256 SLC27A3Q5K4L6 730 aa25.57■■□□□ 1.68
MUC1-204ENST00000343256 GRIN3BO60391 1043 aa25.56■■□□□ 1.68
MUC1-204ENST00000343256 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
MUC1-204ENST00000343256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.55■■□□□ 1.68
MUC1-204ENST00000343256 DDX54Q8TDD1 881 aaKnown RBP25.55■■□□□ 1.68
MUC1-204ENST00000343256 ANKRD24Q8TF21 1146 aa25.55■■□□□ 1.68
MUC1-204ENST00000343256 LTN1O94822 1766 aa25.54■■□□□ 1.68
MUC1-204ENST00000343256 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
MUC1-204ENST00000343256 MSH5O43196 834 aa25.51■■□□□ 1.67
MUC1-204ENST00000343256 NME9Q86XW9 330 aa25.5■■□□□ 1.67
MUC1-204ENST00000343256 ZNF526Q8TF50 670 aaPredicted RBP25.5■■□□□ 1.67
MUC1-204ENST00000343256 GPBP1L1Q9HC44 474 aaPredicted RBP25.5■■□□□ 1.67
MUC1-204ENST00000343256 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
MUC1-204ENST00000343256 HSPA6P17066 643 aa25.49■■□□□ 1.67
MUC1-204ENST00000343256 MSL1Q68DK7 614 aa25.49■■□□□ 1.67
MUC1-204ENST00000343256 USP31Q70CQ4 1352 aa25.48■■□□□ 1.67
MUC1-204ENST00000343256 PRIM1P49642 420 aaKnown RBP25.48■■□□□ 1.67
MUC1-204ENST00000343256 COL23A1Q86Y22 540 aaPredicted RBP25.47■■□□□ 1.67
MUC1-204ENST00000343256 LY75O60449 1722 aa25.46■■□□□ 1.67
MUC1-204ENST00000343256 DOT1LQ8TEK3 1739 aa25.46■■□□□ 1.67
MUC1-204ENST00000343256 USP54Q70EL1 1684 aa25.45■■□□□ 1.67
MUC1-204ENST00000343256 NSD2O96028 1365 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms