RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 COL18A1P39060 1754 aa27.7■■■□□ 2.02
SNX21-201ENST00000342644 BLMP54132 1417 aaPredicted RBP27.69■■■□□ 2.02
SNX21-201ENST00000342644 HSP90AB2PQ58FF8 381 aa27.68■■■□□ 2.02
SNX21-201ENST00000342644 DIAPH1O60610 1272 aaKnown RBP27.67■■■□□ 2.02
SNX21-201ENST00000342644 PRDM11Q9NQV5 511 aa27.66■■■□□ 2.02
SNX21-201ENST00000342644 IL13P35225 146 aa27.64■■■□□ 2.02
SNX21-201ENST00000342644 LMO7Q8WWI1 1683 aa27.64■■■□□ 2.02
SNX21-201ENST00000342644 NUDCQ9Y266 331 aa27.63■■■□□ 2.01
SNX21-201ENST00000342644 ZBTB7CA1YPR0 619 aa27.62■■■□□ 2.01
SNX21-201ENST00000342644 EIF4A2Q14240 407 aaKnown RBP27.62■■■□□ 2.01
SNX21-201ENST00000342644 AXIN2Q9Y2T1 843 aa27.62■■■□□ 2.01
SNX21-201ENST00000342644 COL14A1Q05707 1796 aaKnown RBP27.62■■■□□ 2.01
SNX21-201ENST00000342644 CHRNA2Q15822 529 aa27.61■■■□□ 2.01
SNX21-201ENST00000342644 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
SNX21-201ENST00000342644 FAM83GA6ND36 823 aa27.6■■■□□ 2.01
SNX21-201ENST00000342644 WDR43Q15061 677 aaKnown RBP eCLIP27.58■■■□□ 2.01
SNX21-201ENST00000342644 CAMTA1Q9Y6Y1 1673 aa27.58■■■□□ 2
SNX21-201ENST00000342644 NUTM2BA6NNL0 878 aaPredicted RBP27.57■■■□□ 2
SNX21-201ENST00000342644 NUTM2EB1AL46 878 aaPredicted RBP27.57■■■□□ 2
SNX21-201ENST00000342644 NUTM2AQ8IVF1 878 aaPredicted RBP27.57■■■□□ 2
SNX21-201ENST00000342644 ERBB3P21860 1342 aa27.57■■■□□ 2
SNX21-201ENST00000342644 RGPD1P0DJD0 1748 aa27.57■■■□□ 2
SNX21-201ENST00000342644 ADAMTS2O95450 1211 aa27.55■■■□□ 2
SNX21-201ENST00000342644 FAM9BQ8IZU0 186 aa27.55■■■□□ 2
SNX21-201ENST00000342644 ANKRD24Q8TF21 1146 aa27.55■■■□□ 2
SNX21-201ENST00000342644 ADAMTS8Q9UP79 889 aa27.55■■■□□ 2
SNX21-201ENST00000342644 LRP6O75581 1613 aa27.55■■■□□ 2
SNX21-201ENST00000342644 FAM208AQ9UK61 1670 aaKnown RBP27.54■■■□□ 2
SNX21-201ENST00000342644 COL5A2P05997 1499 aaPredicted RBP27.53■■■□□ 2
SNX21-201ENST00000342644 U2SURPO15042 1029 aaKnown RBP27.53■■■□□ 2
SNX21-201ENST00000342644 U2AF1L5P0DN76 240 aaPredicted RBP27.52■■■□□ 2
SNX21-201ENST00000342644 U2AF1Q01081 240 aaKnown RBP eCLIP27.52■■■□□ 2
SNX21-201ENST00000342644 IGSF1Q8N6C5 1336 aa27.52■■■□□ 2
SNX21-201ENST00000342644 NWD2Q9ULI1 1742 aa27.51■■□□□ 1.99
SNX21-201ENST00000342644 LTV1Q96GA3 475 aaPredicted RBP27.51■■□□□ 1.99
SNX21-201ENST00000342644 EYA1Q99502 592 aa27.51■■□□□ 1.99
SNX21-201ENST00000342644 PLCH1Q4KWH8 1693 aa27.51■■□□□ 1.99
SNX21-201ENST00000342644 SLIT2O94813 1529 aa27.5■■□□□ 1.99
SNX21-201ENST00000342644 NCAPD2Q15021 1401 aa27.5■■□□□ 1.99
SNX21-201ENST00000342644 BTG4Q9NY30 223 aa27.5■■□□□ 1.99
SNX21-201ENST00000342644 KDRP35968 1356 aa27.49■■□□□ 1.99
SNX21-201ENST00000342644 WDR17Q8IZU2 1322 aa27.49■■□□□ 1.99
SNX21-201ENST00000342644 FCHSD2O94868 740 aa27.49■■□□□ 1.99
SNX21-201ENST00000342644 CENPBP07199 599 aaPredicted RBP27.47■■□□□ 1.99
SNX21-201ENST00000342644 NBPF6Q5VWK0 638 aa27.46■■□□□ 1.99
SNX21-201ENST00000342644 NBPF4Q96M43 638 aa27.46■■□□□ 1.99
SNX21-201ENST00000342644 PNNQ9H307 717 aaKnown RBP27.46■■□□□ 1.99
SNX21-201ENST00000342644 RGPD2P0DJD1 1756 aa27.46■■□□□ 1.99
SNX21-201ENST00000342644 FNBP4Q8N3X1 1017 aaPredicted RBP27.46■■□□□ 1.99
SNX21-201ENST00000342644 NRAPQ86VF7 1730 aa27.46■■□□□ 1.99
SNX21-201ENST00000342644 RSPH6AQ9H0K4 717 aa27.45■■□□□ 1.98
SNX21-201ENST00000342644 CSB-PGBD3P0DP91 1061 aa27.44■■□□□ 1.98
SNX21-201ENST00000342644 EVA1CP58658 441 aa27.44■■□□□ 1.98
SNX21-201ENST00000342644 SULT6B1Q6IMI4 303 aa27.44■■□□□ 1.98
SNX21-201ENST00000342644 NGLY1Q96IV0 654 aa27.43■■□□□ 1.98
SNX21-201ENST00000342644 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
SNX21-201ENST00000342644 C8orf37Q96NL8 207 aa27.42■■□□□ 1.98
SNX21-201ENST00000342644 HMOX1P09601 288 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 PLEKHF1Q96S99 279 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 CRB1P82279 1406 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 MEX3CQ5U5Q3 659 aaKnown RBP27.41■■□□□ 1.98
SNX21-201ENST00000342644 AEBP1Q8IUX7 1158 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 CARD10Q9BWT7 1032 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 STRN4Q9NRL3 753 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 NLRP2Q9NX02 1062 aa27.41■■□□□ 1.98
SNX21-201ENST00000342644 LARP1Q6PKG0 1096 aaKnown RBP27.4■■□□□ 1.98
SNX21-201ENST00000342644 RUNDC1Q96C34 613 aa27.4■■□□□ 1.98
SNX21-201ENST00000342644 BCL9LQ86UU0 1499 aa27.39■■□□□ 1.98
SNX21-201ENST00000342644 TOM1L2Q6ZVM7 507 aa27.39■■□□□ 1.98
SNX21-201ENST00000342644 UNC5CLQ8IV45 518 aa27.39■■□□□ 1.98
SNX21-201ENST00000342644 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.39■■□□□ 1.97
SNX21-201ENST00000342644 PLEKHG2Q9H7P9 1386 aa27.38■■□□□ 1.97
SNX21-201ENST00000342644 PRKAR2BP31323 418 aa27.38■■□□□ 1.97
SNX21-201ENST00000342644 USHBP1Q8N6Y0 703 aa27.36■■□□□ 1.97
SNX21-201ENST00000342644 CCDC146Q8IYE0 955 aa27.35■■□□□ 1.97
SNX21-201ENST00000342644 NEFMP07197 916 aa27.34■■□□□ 1.97
SNX21-201ENST00000342644 USP21Q9UK80 565 aa27.33■■□□□ 1.97
SNX21-201ENST00000342644 MAPK8IP3Q9UPT6 1336 aa27.32■■□□□ 1.96
SNX21-201ENST00000342644 VPS72Q15906 364 aa27.31■■□□□ 1.96
SNX21-201ENST00000342644 NCBP3Q53F19 620 aaKnown RBP27.31■■□□□ 1.96
SNX21-201ENST00000342644 AFF2P51816 1311 aa27.31■■□□□ 1.96
SNX21-201ENST00000342644 NGEFQ8N5V2 710 aa27.31■■□□□ 1.96
SNX21-201ENST00000342644 PHACTR3Q96KR7 559 aa27.31■■□□□ 1.96
SNX21-201ENST00000342644 TCP11L2Q8N4U5 519 aa27.3■■□□□ 1.96
SNX21-201ENST00000342644 THRAP3Q9Y2W1 955 aaKnown RBP27.3■■□□□ 1.96
SNX21-201ENST00000342644 SPATA31A1Q5TZJ5 1347 aa27.3■■□□□ 1.96
SNX21-201ENST00000342644 SPATA31A5Q5VU36 1347 aa27.3■■□□□ 1.96
SNX21-201ENST00000342644 SPATA31A7Q8IWB4 1347 aa27.3■■□□□ 1.96
SNX21-201ENST00000342644 APAF1O14727 1248 aa27.29■■□□□ 1.96
SNX21-201ENST00000342644 RAPGEF4Q8WZA2 1011 aa27.29■■□□□ 1.96
SNX21-201ENST00000342644 TATP17735 454 aaPredicted RBP27.26■■□□□ 1.96
SNX21-201ENST00000342644 HNRNPUQ00839 825 aaKnown RBP eCLIP27.26■■□□□ 1.96
SNX21-201ENST00000342644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.96
SNX21-201ENST00000342644 MEGF6O75095 1541 aa27.26■■□□□ 1.95
SNX21-201ENST00000342644 PARP4Q9UKK3 1724 aaKnown RBP27.26■■□□□ 1.95
SNX21-201ENST00000342644 TMPOP42166 694 aaKnown RBP27.26■■□□□ 1.95
SNX21-201ENST00000342644 AMOTQ4VCS5 1084 aa27.26■■□□□ 1.95
SNX21-201ENST00000342644 IL2RBP14784 551 aa27.25■■□□□ 1.95
SNX21-201ENST00000342644 NFE2L2Q16236 605 aa27.25■■□□□ 1.95
SNX21-201ENST00000342644 OVOS2A0A0G2JMS6 1433 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms