RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 TOM1L2Q6ZVM7 507 aa24.65■■□□□ 1.54
TRA2B-202ENST00000342294 ZBTB7CA1YPR0 619 aa24.64■■□□□ 1.54
TRA2B-202ENST00000342294 NBPF1Q3BBV0 1214 aa24.64■■□□□ 1.54
TRA2B-202ENST00000342294 CABP2Q9NPB3 220 aa24.64■■□□□ 1.54
TRA2B-202ENST00000342294 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
TRA2B-202ENST00000342294 WDR17Q8IZU2 1322 aa24.63■■□□□ 1.53
TRA2B-202ENST00000342294 USP6P35125 1406 aa24.63■■□□□ 1.53
TRA2B-202ENST00000342294 CDCA7Q9BWT1 371 aaPredicted RBP24.63■■□□□ 1.53
TRA2B-202ENST00000342294 ATF5Q9Y2D1 282 aaPredicted RBP24.62■■□□□ 1.53
TRA2B-202ENST00000342294 COL18A1P39060 1754 aa24.62■■□□□ 1.53
TRA2B-202ENST00000342294 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
TRA2B-202ENST00000342294 TXNRD1Q16881 649 aa24.61■■□□□ 1.53
TRA2B-202ENST00000342294 CABP1Q9NZU7 370 aa24.61■■□□□ 1.53
TRA2B-202ENST00000342294 MYOM1P52179 1685 aa24.61■■□□□ 1.53
TRA2B-202ENST00000342294 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
TRA2B-202ENST00000342294 CENPJQ9HC77 1338 aaPredicted RBP24.6■■□□□ 1.53
TRA2B-202ENST00000342294 SLC15A2Q16348 729 aa24.59■■□□□ 1.53
TRA2B-202ENST00000342294 SGIP1Q9BQI5 828 aa24.59■■□□□ 1.53
TRA2B-202ENST00000342294 FHDC1Q9C0D6 1143 aaPredicted RBP24.59■■□□□ 1.53
TRA2B-202ENST00000342294 STK32BQ9NY57 414 aa24.59■■□□□ 1.53
TRA2B-202ENST00000342294 ARHGEF25Q86VW2 580 aa24.58■■□□□ 1.53
TRA2B-202ENST00000342294 CARD10Q9BWT7 1032 aa24.57■■□□□ 1.52
TRA2B-202ENST00000342294 CPSF1Q10570 1443 aaKnown RBP24.56■■□□□ 1.52
TRA2B-202ENST00000342294 MTFR1LQ9H019 292 aa24.55■■□□□ 1.52
TRA2B-202ENST00000342294 WNK3Q9BYP7 1800 aa24.54■■□□□ 1.52
TRA2B-202ENST00000342294 PIK3C2AO00443 1686 aa24.53■■□□□ 1.52
TRA2B-202ENST00000342294 EXOC5O00471 708 aa24.52■■□□□ 1.52
TRA2B-202ENST00000342294 AKAP12Q02952 1782 aa24.5■■□□□ 1.51
TRA2B-202ENST00000342294 KCNH5Q8NCM2 988 aa24.5■■□□□ 1.51
TRA2B-202ENST00000342294 CSB-PGBD3P0DP91 1061 aa24.48■■□□□ 1.51
TRA2B-202ENST00000342294 C1QTNF8P60827 252 aa24.48■■□□□ 1.51
TRA2B-202ENST00000342294 TTC21BQ7Z4L5 1316 aa24.48■■□□□ 1.51
TRA2B-202ENST00000342294 MAP3K5Q99683 1374 aa24.48■■□□□ 1.51
TRA2B-202ENST00000342294 CCDC7Q96M83 1385 aa24.47■■□□□ 1.51
TRA2B-202ENST00000342294 ARXQ96QS3 562 aa24.47■■□□□ 1.51
TRA2B-202ENST00000342294 TNS2Q63HR2 1409 aa24.46■■□□□ 1.51
TRA2B-202ENST00000342294 SENP3-EIF4A1A0A087X0R7 540 aa24.46■■□□□ 1.51
TRA2B-202ENST00000342294 ZNF692Q9BU19 519 aaPredicted RBP24.46■■□□□ 1.51
TRA2B-202ENST00000342294 QRICH2Q9H0J4 1663 aa24.45■■□□□ 1.5
TRA2B-202ENST00000342294 TRPM1Q7Z4N2 1603 aa24.44■■□□□ 1.5
TRA2B-202ENST00000342294 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 TTC21AQ8NDW8 1320 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 UTRNP46939 3433 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 SOX12O15370 315 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 NFAT5O94916 1531 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 RGPD5Q99666 1765 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 PAPPAQ13219 1627 aa24.43■■□□□ 1.5
TRA2B-202ENST00000342294 CHD4Q14839 1912 aa24.42■■□□□ 1.5
TRA2B-202ENST00000342294 NHSQ6T4R5 1651 aa24.41■■□□□ 1.5
TRA2B-202ENST00000342294 ACSBG1Q96GR2 724 aa24.41■■□□□ 1.5
TRA2B-202ENST00000342294 ABCC6O95255 1503 aa24.4■■□□□ 1.5
TRA2B-202ENST00000342294 ZNF827Q17R98 1081 aa24.39■■□□□ 1.49
TRA2B-202ENST00000342294 LRRC4BQ9NT99 713 aa24.37■■□□□ 1.49
TRA2B-202ENST00000342294 ERBB3P21860 1342 aa24.35■■□□□ 1.49
TRA2B-202ENST00000342294 IL2RBP14784 551 aa24.34■■□□□ 1.49
TRA2B-202ENST00000342294 GPR162Q16538 588 aa24.34■■□□□ 1.49
TRA2B-202ENST00000342294 AKT1S1Q96B36 256 aa24.34■■□□□ 1.49
TRA2B-202ENST00000342294 USP31Q70CQ4 1352 aa24.33■■□□□ 1.49
TRA2B-202ENST00000342294 SLC16A10Q8TF71 515 aa24.33■■□□□ 1.49
TRA2B-202ENST00000342294 NLRP2Q9NX02 1062 aa24.33■■□□□ 1.49
TRA2B-202ENST00000342294 KTN1Q86UP2 1357 aaKnown RBP24.32■■□□□ 1.48
TRA2B-202ENST00000342294 BTAF1O14981 1849 aa24.31■■□□□ 1.48
TRA2B-202ENST00000342294 L3MBTL2Q969R5 705 aa24.29■■□□□ 1.48
TRA2B-202ENST00000342294 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
TRA2B-202ENST00000342294 PNPLA7Q6ZV29 1317 aa24.28■■□□□ 1.48
TRA2B-202ENST00000342294 SLC27A3Q5K4L6 730 aa24.27■■□□□ 1.48
TRA2B-202ENST00000342294 IFFO2Q5TF58 517 aa24.27■■□□□ 1.48
TRA2B-202ENST00000342294 POLD1P28340 1107 aa24.26■■□□□ 1.47
TRA2B-202ENST00000342294 ANKRD24Q8TF21 1146 aa24.26■■□□□ 1.47
TRA2B-202ENST00000342294 COL24A1Q17RW2 1714 aa24.26■■□□□ 1.47
TRA2B-202ENST00000342294 NME9Q86XW9 330 aa24.25■■□□□ 1.47
TRA2B-202ENST00000342294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRA2B-202ENST00000342294 USP54Q70EL1 1684 aa24.24■■□□□ 1.47
TRA2B-202ENST00000342294 KLHL34Q8N239 644 aa24.23■■□□□ 1.47
TRA2B-202ENST00000342294 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
TRA2B-202ENST00000342294 SBNO2Q9Y2G9 1366 aa24.23■■□□□ 1.47
TRA2B-202ENST00000342294 QSER1Q2KHR3 1735 aa24.23■■□□□ 1.47
TRA2B-202ENST00000342294 MON2Q7Z3U7 1717 aa24.22■■□□□ 1.47
TRA2B-202ENST00000342294 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
TRA2B-202ENST00000342294 ROCK2O75116 1388 aaKnown RBP24.2■■□□□ 1.46
TRA2B-202ENST00000342294 PELP1Q8IZL8 1130 aaKnown RBP24.2■■□□□ 1.46
TRA2B-202ENST00000342294 TFCP2L1Q9NZI6 479 aa24.2■■□□□ 1.46
TRA2B-202ENST00000342294 SHANK3Q9BYB0 1731 aa24.2■■□□□ 1.46
TRA2B-202ENST00000342294 KCNQ4P56696 695 aa24.19■■□□□ 1.46
TRA2B-202ENST00000342294 DDX54Q8TDD1 881 aaKnown RBP24.18■■□□□ 1.46
TRA2B-202ENST00000342294 YBX3P16989 372 aaKnown RBP eCLIP24.17■■□□□ 1.46
TRA2B-202ENST00000342294 LTN1O94822 1766 aa24.16■■□□□ 1.46
TRA2B-202ENST00000342294 IP6K1Q92551 441 aa24.16■■□□□ 1.46
TRA2B-202ENST00000342294 KAT6BQ8WYB5 2073 aa24.15■■□□□ 1.46
TRA2B-202ENST00000342294 GRIN3BO60391 1043 aa24.15■■□□□ 1.46
TRA2B-202ENST00000342294 PRIM1P49642 420 aaKnown RBP24.15■■□□□ 1.46
TRA2B-202ENST00000342294 NSD2O96028 1365 aa24.15■■□□□ 1.46
TRA2B-202ENST00000342294 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
TRA2B-202ENST00000342294 EDC4Q6P2E9 1401 aaKnown RBP24.13■■□□□ 1.45
TRA2B-202ENST00000342294 TUBGCP6Q96RT7 1819 aa24.13■■□□□ 1.45
TRA2B-202ENST00000342294 SLC12A5Q9H2X9 1139 aa24.12■■□□□ 1.45
TRA2B-202ENST00000342294 HDGFL2Q7Z4V5 671 aaPredicted RBP24.11■■□□□ 1.45
TRA2B-202ENST00000342294 SYTL4Q96C24 671 aaPredicted RBP24.11■■□□□ 1.45
TRA2B-202ENST00000342294 SIN3AQ96ST3 1273 aa24.11■■□□□ 1.45
TRA2B-202ENST00000342294 CEP350Q5VT06 3117 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms