RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 FSD2A1L4K1 749 aa14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 FBLN1P23142 703 aa14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 CCDC83Q8IWF9 413 aa14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 MIS18AQ9NYP9 233 aa14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 HECW1Q76N89 1606 aa14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 PES1O00541 588 aaKnown RBP14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 CWC27Q6UX04 472 aaKnown RBP14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 TRMT1Q9NXH9 659 aaKnown RBP14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 TNNT1P13805 278 aa14.96□□□□□ -0.01
SSX2IP-201ENST00000342203 RNF20Q5VTR2 975 aa14.96□□□□□ -0.02
SSX2IP-201ENST00000342203 TMX3Q96JJ7 454 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 SULT6B1Q6IMI4 303 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 CNTROBQ8N137 903 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 ANTXR1Q9H6X2 564 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 NUTM1Q86Y26 1132 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 RPAP2Q8IXW5 612 aaPredicted RBP14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 NOL7Q9UMY1 257 aaKnown RBP14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 KDM4AO75164 1064 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 PRAM1Q96QH2 718 aa14.95□□□□□ -0.02
SSX2IP-201ENST00000342203 GNAI3P08754 354 aa14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 PDILTQ8N807 584 aa14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 F6X3S4 739 aa14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 JAKMIP1Q96N16 626 aaKnown RBP14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 SDSP20132 328 aa14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 PRIMPOLQ96LW4 560 aa14.94□□□□□ -0.02
SSX2IP-201ENST00000342203 MAP3K11Q16584 847 aa14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 CCDC94Q9BW85 323 aaPredicted RBP14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 V9GYY5 206 aaPredicted RBP14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 TEX14Q8IWB6 1497 aa14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 TTLL5Q6EMB2 1281 aa14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 RRS1Q15050 365 aaKnown RBP14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 CLASRPQ8N2M8 674 aaKnown RBP14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 CYP46A1Q9Y6A2 500 aa14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 ERBB4Q15303 1308 aa14.93□□□□□ -0.02
SSX2IP-201ENST00000342203 PDCP20941 246 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 DTNBO60941 627 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 SPATA32Q96LK8 384 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 TFIP11Q9UBB9 837 aaKnown RBP14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 CARD14Q9BXL6 1004 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 CASTP20810 708 aaKnown RBP14.92□□□□□ -0.02
SSX2IP-201ENST00000342203 NFE2L2Q16236 605 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 TTC22Q5TAA0 569 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 ARHGEF11O15085 1522 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 ALDH1L2Q3SY69 923 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 FCHSD2O94868 740 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 G3BP1Q13283 466 aaKnown RBP eCLIP14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 CPLX1O14810 134 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 POLR3GO15318 223 aaPredicted RBP14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 PTPN14Q15678 1187 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
SSX2IP-201ENST00000342203 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 TEFQ10587 303 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 HS1BP3Q53T59 392 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 CNPY2Q9Y2B0 182 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 ARHGAP5Q13017 1502 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 MCM10Q7L590 875 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
SSX2IP-201ENST00000342203 MX1P20591 662 aa14.89□□□□□ -0.03
SSX2IP-201ENST00000342203 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SSX2IP-201ENST00000342203 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
SSX2IP-201ENST00000342203 USP19O94966 1318 aa14.89□□□□□ -0.03
SSX2IP-201ENST00000342203 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
SSX2IP-201ENST00000342203 PKP1Q13835 747 aa14.89□□□□□ -0.03
SSX2IP-201ENST00000342203 FAM83GA6ND36 823 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 ME1P48163 572 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 AIMP1Q12904 312 aaKnown RBP14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 NAT10Q9H0A0 1025 aaKnown RBP14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 PRAG1Q86YV5 1406 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 CCDC186Q7Z3E2 898 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 NOC3LQ8WTT2 800 aaKnown RBP14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 GTF2F1P35269 517 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■■■□□ 17.3
SSX2IP-201ENST00000342203 HSP90B2PQ58FF3 399 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 CLIP2Q9UDT6 1046 aa14.88□□□□□ -0.03
SSX2IP-201ENST00000342203 PSMA5P28066 241 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 ZBTB9Q96C00 473 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 SPG7Q9UQ90 795 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 SYNE3Q6ZMZ3 975 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 TMEM63CQ9P1W3 806 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 SRGAP3O43295 1099 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 U2AF2P26368 475 aaKnown RBP eCLIP14.87□□□□□ -0.038e-6■■■□□ 17.9
SSX2IP-201ENST00000342203 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 UBXN4Q92575 508 aa14.87□□□□□ -0.03
SSX2IP-201ENST00000342203 PRPF40BQ6NWY9 871 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms