RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
TUBB4B-201ENST00000340384 PEAK1Q9H792 1746 aa20.03■□□□□ 0.8
TUBB4B-201ENST00000340384 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.8
TUBB4B-201ENST00000340384 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.79
TUBB4B-201ENST00000340384 CPDO75976 1380 aa20.02■□□□□ 0.79
TUBB4B-201ENST00000340384 KIAA0232Q92628 1395 aa20.02■□□□□ 0.79
TUBB4B-201ENST00000340384 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
TUBB4B-201ENST00000340384 FAM83GA6ND36 823 aa20■□□□□ 0.79
TUBB4B-201ENST00000340384 NUTM2BA6NNL0 878 aaPredicted RBP20■□□□□ 0.79
TUBB4B-201ENST00000340384 NUTM2EB1AL46 878 aaPredicted RBP20■□□□□ 0.79
TUBB4B-201ENST00000340384 NUTM2AQ8IVF1 878 aaPredicted RBP20■□□□□ 0.79
TUBB4B-201ENST00000340384 LRP6O75581 1613 aa20■□□□□ 0.79
TUBB4B-201ENST00000340384 CHRNA2Q15822 529 aa19.99■□□□□ 0.79
TUBB4B-201ENST00000340384 HSP90AB2PQ58FF8 381 aa19.99■□□□□ 0.79
TUBB4B-201ENST00000340384 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
TUBB4B-201ENST00000340384 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
TUBB4B-201ENST00000340384 HOXC9P31274 260 aa19.98■□□□□ 0.79
TUBB4B-201ENST00000340384 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
TUBB4B-201ENST00000340384 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
TUBB4B-201ENST00000340384 IP6K1Q92551 441 aa19.98■□□□□ 0.79
TUBB4B-201ENST00000340384 COL18A1P39060 1754 aa19.97■□□□□ 0.79
TUBB4B-201ENST00000340384 ADAMTS2O95450 1211 aa19.97■□□□□ 0.79
TUBB4B-201ENST00000340384 LTN1O94822 1766 aa19.97■□□□□ 0.79
TUBB4B-201ENST00000340384 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
TUBB4B-201ENST00000340384 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
TUBB4B-201ENST00000340384 ZBTB7CA1YPR0 619 aa19.96■□□□□ 0.79
TUBB4B-201ENST00000340384 HAP1P54257 671 aaPredicted RBP19.96■□□□□ 0.79
TUBB4B-201ENST00000340384 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
TUBB4B-201ENST00000340384 AMPHP49418 695 aa19.95■□□□□ 0.78
TUBB4B-201ENST00000340384 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
TUBB4B-201ENST00000340384 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
TUBB4B-201ENST00000340384 FLT4P35916 1363 aa19.94■□□□□ 0.78
TUBB4B-201ENST00000340384 KIF24Q5T7B8 1368 aa19.94■□□□□ 0.78
TUBB4B-201ENST00000340384 CAMTA1Q9Y6Y1 1673 aa19.94■□□□□ 0.78
TUBB4B-201ENST00000340384 LMO7Q8WWI1 1683 aa19.93■□□□□ 0.78
TUBB4B-201ENST00000340384 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
TUBB4B-201ENST00000340384 RTL1A6NKG5 1358 aa19.93■□□□□ 0.78
TUBB4B-201ENST00000340384 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
TUBB4B-201ENST00000340384 IL13P35225 146 aa19.91■□□□□ 0.78
TUBB4B-201ENST00000340384 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
TUBB4B-201ENST00000340384 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
TUBB4B-201ENST00000340384 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
TUBB4B-201ENST00000340384 RUNDC1Q96C34 613 aa19.9■□□□□ 0.78
TUBB4B-201ENST00000340384 RGPD5Q99666 1765 aa19.9■□□□□ 0.78
TUBB4B-201ENST00000340384 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
TUBB4B-201ENST00000340384 CDCA7LQ96GN5 454 aa19.89■□□□□ 0.77
TUBB4B-201ENST00000340384 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
TUBB4B-201ENST00000340384 BTG4Q9NY30 223 aa19.88■□□□□ 0.77
TUBB4B-201ENST00000340384 ABCC6O95255 1503 aa19.88■□□□□ 0.77
TUBB4B-201ENST00000340384 APAF1O14727 1248 aa19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 DIAPH1O60610 1272 aaKnown RBP19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 LTV1Q96GA3 475 aaPredicted RBP19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 COL14A1Q05707 1796 aaKnown RBP19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 ERBB3P21860 1342 aa19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 SLIT2O94813 1529 aa19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 ANKRD24Q8TF21 1146 aa19.87■□□□□ 0.77
TUBB4B-201ENST00000340384 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
TUBB4B-201ENST00000340384 C8orf37Q96NL8 207 aa19.86■□□□□ 0.77
TUBB4B-201ENST00000340384 COL5A2P05997 1499 aaPredicted RBP19.86■□□□□ 0.77
TUBB4B-201ENST00000340384 E9PSI1 815 aa19.85■□□□□ 0.77
TUBB4B-201ENST00000340384 NBPF6Q5VWK0 638 aa19.85■□□□□ 0.77
TUBB4B-201ENST00000340384 NBPF4Q96M43 638 aa19.85■□□□□ 0.77
TUBB4B-201ENST00000340384 BCL9LQ86UU0 1499 aa19.84■□□□□ 0.77
TUBB4B-201ENST00000340384 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
TUBB4B-201ENST00000340384 EYA1Q99502 592 aa19.84■□□□□ 0.77
TUBB4B-201ENST00000340384 NGLY1Q96IV0 654 aa19.84■□□□□ 0.77
TUBB4B-201ENST00000340384 PNNQ9H307 717 aaKnown RBP19.84■□□□□ 0.77
TUBB4B-201ENST00000340384 PLCH1Q4KWH8 1693 aa19.83■□□□□ 0.76
TUBB4B-201ENST00000340384 DUSP27Q5VZP5 1158 aa19.83■□□□□ 0.76
TUBB4B-201ENST00000340384 LARP1Q6PKG0 1096 aaKnown RBP19.83■□□□□ 0.76
TUBB4B-201ENST00000340384 RGPD1P0DJD0 1748 aa19.82■□□□□ 0.76
TUBB4B-201ENST00000340384 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
TUBB4B-201ENST00000340384 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
TUBB4B-201ENST00000340384 NRAPQ86VF7 1730 aa19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 IGSF1Q8N6C5 1336 aa19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 U2AF1L5P0DN76 240 aaPredicted RBP19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 U2AF1Q01081 240 aaKnown RBP eCLIP19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 CCDC27Q2M243 656 aa19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 AEBP1Q8IUX7 1158 aa19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 TRMT2AQ8IZ69 625 aaKnown RBP19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 USHBP1Q8N6Y0 703 aa19.8■□□□□ 0.76
TUBB4B-201ENST00000340384 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
TUBB4B-201ENST00000340384 UNC5CLQ8IV45 518 aa19.79■□□□□ 0.76
TUBB4B-201ENST00000340384 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
TUBB4B-201ENST00000340384 AFF2P51816 1311 aa19.78■□□□□ 0.76
TUBB4B-201ENST00000340384 HMOX1P09601 288 aa19.78■□□□□ 0.76
TUBB4B-201ENST00000340384 EVA1CP58658 441 aa19.78■□□□□ 0.76
TUBB4B-201ENST00000340384 NWD2Q9ULI1 1742 aa19.78■□□□□ 0.76
TUBB4B-201ENST00000340384 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
TUBB4B-201ENST00000340384 TCP11L2Q8N4U5 519 aa19.77■□□□□ 0.76
TUBB4B-201ENST00000340384 CCDC136Q96JN2 1154 aa19.77■□□□□ 0.76
TUBB4B-201ENST00000340384 NLRP2Q9NX02 1062 aa19.77■□□□□ 0.76
TUBB4B-201ENST00000340384 CSB-PGBD3P0DP91 1061 aa19.76■□□□□ 0.75
TUBB4B-201ENST00000340384 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
TUBB4B-201ENST00000340384 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
TUBB4B-201ENST00000340384 USP21Q9UK80 565 aa19.76■□□□□ 0.75
TUBB4B-201ENST00000340384 KDRP35968 1356 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms