RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 NUDCQ9Y266 331 aa19.74■□□□□ 0.75
CSRP1-201ENST00000340006 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
CSRP1-201ENST00000340006 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
CSRP1-201ENST00000340006 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
CSRP1-201ENST00000340006 U2SURPO15042 1029 aaKnown RBP19.72■□□□□ 0.75
CSRP1-201ENST00000340006 AXIN2Q9Y2T1 843 aa19.72■□□□□ 0.75
CSRP1-201ENST00000340006 KIF24Q5T7B8 1368 aa19.72■□□□□ 0.75
CSRP1-201ENST00000340006 SPATA31A6Q5VVP1 1343 aa19.72■□□□□ 0.75
CSRP1-201ENST00000340006 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
CSRP1-201ENST00000340006 CPDO75976 1380 aa19.71■□□□□ 0.75
CSRP1-201ENST00000340006 PNISRQ8TF01 805 aaKnown RBP19.7■□□□□ 0.74
CSRP1-201ENST00000340006 PEAK1Q9H792 1746 aa19.7■□□□□ 0.74
CSRP1-201ENST00000340006 SMG6Q86US8 1419 aaKnown RBP19.7■□□□□ 0.74
CSRP1-201ENST00000340006 EVA1CP58658 441 aa19.7■□□□□ 0.74
CSRP1-201ENST00000340006 YTHDC1Q96MU7 727 aaKnown RBP19.7■□□□□ 0.74
CSRP1-201ENST00000340006 RGPD5Q99666 1765 aa19.69■□□□□ 0.74
CSRP1-201ENST00000340006 CDK12Q9NYV4 1490 aaPredicted RBP19.69■□□□□ 0.74
CSRP1-201ENST00000340006 EIF4A2Q14240 407 aaKnown RBP19.69■□□□□ 0.74
CSRP1-201ENST00000340006 MEX3CQ5U5Q3 659 aaKnown RBP19.69■□□□□ 0.74
CSRP1-201ENST00000340006 RTL1A6NKG5 1358 aa19.69■□□□□ 0.74
CSRP1-201ENST00000340006 INSRP06213 1382 aa19.69■□□□□ 0.74
CSRP1-201ENST00000340006 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
CSRP1-201ENST00000340006 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.74
CSRP1-201ENST00000340006 CSB-PGBD3P0DP91 1061 aa19.68■□□□□ 0.74
CSRP1-201ENST00000340006 IL13P35225 146 aa19.68■□□□□ 0.74
CSRP1-201ENST00000340006 ANKRD24Q8TF21 1146 aa19.68■□□□□ 0.74
CSRP1-201ENST00000340006 NGLY1Q96IV0 654 aa19.67■□□□□ 0.74
CSRP1-201ENST00000340006 BTG4Q9NY30 223 aa19.67■□□□□ 0.74
CSRP1-201ENST00000340006 C8orf37Q96NL8 207 aa19.66■□□□□ 0.74
CSRP1-201ENST00000340006 ADAMTS8Q9UP79 889 aa19.66■□□□□ 0.74
CSRP1-201ENST00000340006 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
CSRP1-201ENST00000340006 BLMP54132 1417 aaPredicted RBP19.64■□□□□ 0.74
CSRP1-201ENST00000340006 COL18A1P39060 1754 aa19.63■□□□□ 0.73
CSRP1-201ENST00000340006 HMOX1P09601 288 aa19.63■□□□□ 0.73
CSRP1-201ENST00000340006 EYA1Q99502 592 aa19.63■□□□□ 0.73
CSRP1-201ENST00000340006 NLRP2Q9NX02 1062 aa19.63■□□□□ 0.73
CSRP1-201ENST00000340006 COL3A1P02461 1466 aaPredicted RBP19.62■□□□□ 0.73
CSRP1-201ENST00000340006 SULT6B1Q6IMI4 303 aa19.61■□□□□ 0.73
CSRP1-201ENST00000340006 TOM1L2Q6ZVM7 507 aa19.61■□□□□ 0.73
CSRP1-201ENST00000340006 CAMTA1Q9Y6Y1 1673 aa19.61■□□□□ 0.73
CSRP1-201ENST00000340006 ERBB3P21860 1342 aa19.61■□□□□ 0.73
CSRP1-201ENST00000340006 COL14A1Q05707 1796 aaKnown RBP19.61■□□□□ 0.73
CSRP1-201ENST00000340006 NBPF6Q5VWK0 638 aa19.61■□□□□ 0.73
CSRP1-201ENST00000340006 NBPF4Q96M43 638 aa19.61■□□□□ 0.73
CSRP1-201ENST00000340006 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
CSRP1-201ENST00000340006 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
CSRP1-201ENST00000340006 FCHSD2O94868 740 aa19.58■□□□□ 0.73
CSRP1-201ENST00000340006 NEFMP07197 916 aa19.58■□□□□ 0.73
CSRP1-201ENST00000340006 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.73
CSRP1-201ENST00000340006 CCDC146Q8IYE0 955 aa19.58■□□□□ 0.73
CSRP1-201ENST00000340006 RGPD2P0DJD1 1756 aa19.58■□□□□ 0.72
CSRP1-201ENST00000340006 ABCC6O95255 1503 aa19.58■□□□□ 0.72
CSRP1-201ENST00000340006 USP35Q9P2H5 1018 aa19.57■□□□□ 0.72
CSRP1-201ENST00000340006 LRP6O75581 1613 aa19.57■□□□□ 0.72
CSRP1-201ENST00000340006 WDR17Q8IZU2 1322 aa19.57■□□□□ 0.72
CSRP1-201ENST00000340006 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
CSRP1-201ENST00000340006 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
CSRP1-201ENST00000340006 AEBP1Q8IUX7 1158 aa19.56■□□□□ 0.72
CSRP1-201ENST00000340006 COL5A2P05997 1499 aaPredicted RBP19.56■□□□□ 0.72
CSRP1-201ENST00000340006 USP21Q9UK80 565 aa19.55■□□□□ 0.72
CSRP1-201ENST00000340006 IGSF1Q8N6C5 1336 aa19.55■□□□□ 0.72
CSRP1-201ENST00000340006 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
CSRP1-201ENST00000340006 UNC5CLQ8IV45 518 aa19.55■□□□□ 0.72
CSRP1-201ENST00000340006 PLCH1Q4KWH8 1693 aa19.54■□□□□ 0.72
CSRP1-201ENST00000340006 PRKAR2BP31323 418 aa19.54■□□□□ 0.72
CSRP1-201ENST00000340006 FNBP4Q8N3X1 1017 aaPredicted RBP19.54■□□□□ 0.72
CSRP1-201ENST00000340006 RUNDC1Q96C34 613 aa19.54■□□□□ 0.72
CSRP1-201ENST00000340006 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
CSRP1-201ENST00000340006 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.72
CSRP1-201ENST00000340006 CARD10Q9BWT7 1032 aa19.52■□□□□ 0.72
CSRP1-201ENST00000340006 AFF2P51816 1311 aa19.52■□□□□ 0.72
CSRP1-201ENST00000340006 ILDR1Q86SU0 546 aaPredicted RBP19.51■□□□□ 0.71
CSRP1-201ENST00000340006 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
CSRP1-201ENST00000340006 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
CSRP1-201ENST00000340006 NWD2Q9ULI1 1742 aa19.51■□□□□ 0.71
CSRP1-201ENST00000340006 SLIT2O94813 1529 aa19.51■□□□□ 0.71
CSRP1-201ENST00000340006 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
CSRP1-201ENST00000340006 CRB1P82279 1406 aa19.5■□□□□ 0.71
CSRP1-201ENST00000340006 FAM208AQ9UK61 1670 aaKnown RBP19.5■□□□□ 0.71
CSRP1-201ENST00000340006 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
CSRP1-201ENST00000340006 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
CSRP1-201ENST00000340006 PLEKHF1Q96S99 279 aa19.5■□□□□ 0.71
CSRP1-201ENST00000340006 APAF1O14727 1248 aa19.49■□□□□ 0.71
CSRP1-201ENST00000340006 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
CSRP1-201ENST00000340006 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
CSRP1-201ENST00000340006 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
CSRP1-201ENST00000340006 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
CSRP1-201ENST00000340006 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
CSRP1-201ENST00000340006 KDRP35968 1356 aa19.47■□□□□ 0.71
CSRP1-201ENST00000340006 MYT1Q01538 1121 aa19.46■□□□□ 0.71
CSRP1-201ENST00000340006 QTRT2Q9H974 415 aaKnown RBP19.46■□□□□ 0.71
CSRP1-201ENST00000340006 VPS72Q15906 364 aa19.46■□□□□ 0.71
CSRP1-201ENST00000340006 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
CSRP1-201ENST00000340006 IL2RBP14784 551 aa19.45■□□□□ 0.7
CSRP1-201ENST00000340006 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
CSRP1-201ENST00000340006 SPATA31A1Q5TZJ5 1347 aa19.45■□□□□ 0.7
CSRP1-201ENST00000340006 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
CSRP1-201ENST00000340006 TRPC5Q9UL62 973 aaPredicted RBP19.44■□□□□ 0.7
CSRP1-201ENST00000340006 SPATA31A5Q5VU36 1347 aa19.44■□□□□ 0.7
CSRP1-201ENST00000340006 SPATA31A7Q8IWB4 1347 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms