RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 POM121CA8CG34 1229 aa3.9□□□□□ -1.78
SOCS4-201ENST00000339298 DHX16O60231 1041 aaKnown RBP3.9□□□□□ -1.78
SOCS4-201ENST00000339298 CHGBP05060 677 aa3.9□□□□□ -1.78
SOCS4-201ENST00000339298 RNF25Q96BH1 459 aaPredicted RBP3.9□□□□□ -1.78
SOCS4-201ENST00000339298 ST7Q9NRC1 585 aa3.9□□□□□ -1.78
SOCS4-201ENST00000339298 MYL3P08590 195 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 HOXD11P31277 338 aaPredicted RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 RALBP1Q15311 655 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 SPOUT1Q5T280 376 aaKnown RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 MTMR8Q96EF0 704 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 UIMC1Q96RL1 719 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 EFCC1Q9HA90 598 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 FRMD4BQ9Y2L6 1034 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 CCER2I3L3R5 266 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 CCP110O43303 1012 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 EAPPQ56P03 285 aaPredicted RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 LARP1BQ659C4 914 aaKnown RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 GNPATO15228 680 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 GIGYF1O75420 1035 aaPredicted RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 C3orf67Q6ZVT6 689 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 CFAP53Q96M91 514 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 SPOCK3Q9BQ16 436 aa3.9□□□□□ -1.79
SOCS4-201ENST00000339298 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 RBM28Q9NW13 759 aaKnown RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 TFIP11Q9UBB9 837 aaKnown RBP3.9□□□□□ -1.79
SOCS4-201ENST00000339298 GOLGA6L4A6NEF3 574 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 MINDY4BA8MYZ0 360 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 TMEM106CQ9BVX2 250 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 GADD45BO75293 160 aaPredicted RBP3.89□□□□□ -1.79
SOCS4-201ENST00000339298 TCF3P15923 654 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 PCSK2P16519 638 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 PLS1Q14651 629 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 JDP2Q8WYK2 163 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 TRIM11Q96F44 468 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 SMC4Q9NTJ3 1288 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 CACNB1Q02641 598 aaPredicted RBP3.89□□□□□ -1.79
SOCS4-201ENST00000339298 RUBCNQ92622 972 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 CEP83Q9Y592 693 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 NRDCO43847 1150 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 KRT18P05783 430 aaKnown RBP3.89□□□□□ -1.79
SOCS4-201ENST00000339298 CBX8Q9HC52 389 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 TERF2IPQ9NYB0 399 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 NOM1Q5C9Z4 860 aaKnown RBP3.89□□□□□ -1.79
SOCS4-201ENST00000339298 ZBTB33Q86T24 672 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 BARGINQ6ZT62 677 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 MORC4Q8TE76 937 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 ZRANB1Q9UGI0 708 aa3.89□□□□□ -1.79
SOCS4-201ENST00000339298 CCDC175P0C221 793 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 ZRSR1Q15695 479 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 PARP9Q8IXQ6 854 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 UBR7Q8N806 425 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 ACRBPQ8NEB7 543 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 IFIT2P09913 472 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 GTF2A1P52655 376 aaPredicted RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 EIF4G2P78344 907 aaKnown RBP eCLIP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 SEPT14Q6ZU15 432 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 RASEFQ8IZ41 740 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 FAM200AQ8TCP9 573 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 ATP6V1E1P36543 226 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 CNNM4Q6P4Q7 775 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 LCA5Q86VQ0 697 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 SKAP1Q86WV1 359 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 ZCRB1Q8TBF4 217 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 NOB1Q9ULX3 412 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 PPFIA3O75145 1194 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 FMNL1O95466 1100 aaPredicted RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 DNM1Q05193 864 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 PBXIP1Q96AQ6 731 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 NLRP2Q9NX02 1062 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 PNMA2Q9UL42 364 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 DDAH1O94760 285 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 FAM43BQ6ZT52 329 aaPredicted RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 CCT6BQ92526 530 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 ZNHIT6Q9NWK9 470 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 CPSF2Q9P2I0 782 aaKnown RBP3.88□□□□□ -1.79
SOCS4-201ENST00000339298 LIMCH1Q9UPQ0 1083 aa3.88□□□□□ -1.79
SOCS4-201ENST00000339298 GOLGA6L19H0YKK7 550 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 TPD52L2O43399 206 aaKnown RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 SCNN1AP37088 669 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 DDX46Q7L014 1031 aaKnown RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 RNF135Q8IUD6 432 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 RPAP2Q8IXW5 612 aaPredicted RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 SREK1Q8WXA9 508 aaKnown RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 PFDN2Q9UHV9 154 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 DIAPH2O60879 1101 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 PPP1R37O75864 691 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 NASPP49321 788 aaPredicted RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 MAP2K5Q13163 448 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 PRKAG2Q9UGJ0 569 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 TRIM17Q9Y577 477 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 CTDP1Q9Y5B0 961 aaPredicted RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 CA8P35219 290 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 IRF5Q13568 498 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 UBAP1Q9NZ09 502 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 GGT7Q9UJ14 662 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 TTF2Q9UNY4 1162 aaKnown RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 PCDHGB7Q9Y5F8 929 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 ANKRD33BA6NCL7 494 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms