RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 RRS1Q15050 365 aaKnown RBP22.85■■□□□ 1.25
SFN-201ENST00000339276 NPC1L1Q9UHC9 1359 aa22.85■■□□□ 1.25
SFN-201ENST00000339276 POTEAQ6S8J7 498 aa22.84■■□□□ 1.25
SFN-201ENST00000339276 MORC1Q86VD1 984 aa22.84■■□□□ 1.25
SFN-201ENST00000339276 AXIN2Q9Y2T1 843 aa22.84■■□□□ 1.25
SFN-201ENST00000339276 ATRNO75882 1429 aa22.84■■□□□ 1.25
SFN-201ENST00000339276 PEAK1Q9H792 1746 aa22.84■■□□□ 1.25
SFN-201ENST00000339276 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
SFN-201ENST00000339276 MAP2P11137 1827 aaKnown RBP22.83■■□□□ 1.25
SFN-201ENST00000339276 QTRT2Q9H974 415 aaKnown RBP22.82■■□□□ 1.24
SFN-201ENST00000339276 STRN4Q9NRL3 753 aa22.82■■□□□ 1.24
SFN-201ENST00000339276 TRPC5Q9UL62 973 aaPredicted RBP22.81■■□□□ 1.24
SFN-201ENST00000339276 EMILIN1Q9Y6C2 1016 aa22.81■■□□□ 1.24
SFN-201ENST00000339276 RTL1A6NKG5 1358 aa22.8■■□□□ 1.24
SFN-201ENST00000339276 AMPHP49418 695 aa22.8■■□□□ 1.24
SFN-201ENST00000339276 HOXC9P31274 260 aa22.79■■□□□ 1.24
SFN-201ENST00000339276 VPS72Q15906 364 aa22.79■■□□□ 1.24
SFN-201ENST00000339276 IP6K1Q92551 441 aa22.79■■□□□ 1.24
SFN-201ENST00000339276 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
SFN-201ENST00000339276 GLI3P10071 1580 aa22.78■■□□□ 1.24
SFN-201ENST00000339276 EVA1CP58658 441 aa22.78■■□□□ 1.24
SFN-201ENST00000339276 POLKQ9UBT6 870 aa22.78■■□□□ 1.24
SFN-201ENST00000339276 LARP1Q6PKG0 1096 aaKnown RBP22.77■■□□□ 1.24
SFN-201ENST00000339276 FLT4P35916 1363 aa22.76■■□□□ 1.23
SFN-201ENST00000339276 CCDC9Q9Y3X0 531 aaKnown RBP22.76■■□□□ 1.23
SFN-201ENST00000339276 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
SFN-201ENST00000339276 KIF24Q5T7B8 1368 aa22.75■■□□□ 1.23
SFN-201ENST00000339276 PPM1GO15355 546 aaPredicted RBP22.75■■□□□ 1.23
SFN-201ENST00000339276 GJD4Q96KN9 370 aaPredicted RBP22.75■■□□□ 1.23
SFN-201ENST00000339276 ERBB3P21860 1342 aa22.74■■□□□ 1.23
SFN-201ENST00000339276 WDR17Q8IZU2 1322 aa22.74■■□□□ 1.23
SFN-201ENST00000339276 SPATA31A5Q5VU36 1347 aa22.73■■□□□ 1.23
SFN-201ENST00000339276 SPATA31A7Q8IWB4 1347 aa22.73■■□□□ 1.23
SFN-201ENST00000339276 CRB1P82279 1406 aa22.73■■□□□ 1.23
SFN-201ENST00000339276 RXRBP28702 533 aa22.73■■□□□ 1.23
SFN-201ENST00000339276 RBM6P78332 1123 aaKnown RBP22.73■■□□□ 1.23
SFN-201ENST00000339276 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
SFN-201ENST00000339276 ANKRD24Q8TF21 1146 aa22.73■■□□□ 1.23
SFN-201ENST00000339276 LTV1Q96GA3 475 aaPredicted RBP22.73■■□□□ 1.23
SFN-201ENST00000339276 CSB-PGBD3P0DP91 1061 aa22.72■■□□□ 1.23
SFN-201ENST00000339276 INSRP06213 1382 aa22.72■■□□□ 1.23
SFN-201ENST00000339276 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
SFN-201ENST00000339276 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
SFN-201ENST00000339276 CDK12Q9NYV4 1490 aaPredicted RBP22.71■■□□□ 1.23
SFN-201ENST00000339276 TOM1L2Q6ZVM7 507 aa22.7■■□□□ 1.22
SFN-201ENST00000339276 USP35Q9P2H5 1018 aa22.7■■□□□ 1.22
SFN-201ENST00000339276 RGPD2P0DJD1 1756 aa22.7■■□□□ 1.22
SFN-201ENST00000339276 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
SFN-201ENST00000339276 RGS12O14924 1447 aa22.68■■□□□ 1.22
SFN-201ENST00000339276 WNK3Q9BYP7 1800 aa22.67■■□□□ 1.22
SFN-201ENST00000339276 MTHFSP49914 203 aa22.66■■□□□ 1.22
SFN-201ENST00000339276 NLRP2Q9NX02 1062 aa22.66■■□□□ 1.22
SFN-201ENST00000339276 FAM98CQ17RN3 349 aaKnown RBP22.65■■□□□ 1.22
SFN-201ENST00000339276 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
SFN-201ENST00000339276 CARD10Q9BWT7 1032 aa22.65■■□□□ 1.22
SFN-201ENST00000339276 THSD7AQ9UPZ6 1657 aa22.65■■□□□ 1.22
SFN-201ENST00000339276 PPP2R1AP30153 589 aa22.64■■□□□ 1.22
SFN-201ENST00000339276 ILDR2Q71H61 639 aa22.64■■□□□ 1.22
SFN-201ENST00000339276 EIF4A2Q14240 407 aaKnown RBP22.62■■□□□ 1.21
SFN-201ENST00000339276 NBPF6Q5VWK0 638 aa22.61■■□□□ 1.21
SFN-201ENST00000339276 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
SFN-201ENST00000339276 NBPF4Q96M43 638 aa22.61■■□□□ 1.21
SFN-201ENST00000339276 THRAP3Q9Y2W1 955 aaKnown RBP22.61■■□□□ 1.21
SFN-201ENST00000339276 A0A0G2JS52 829 aa22.6■■□□□ 1.21
SFN-201ENST00000339276 ONECUT3O60422 494 aaPredicted RBP22.6■■□□□ 1.21
SFN-201ENST00000339276 MYT1Q01538 1121 aa22.6■■□□□ 1.21
SFN-201ENST00000339276 RALBP1Q15311 655 aa22.6■■□□□ 1.21
SFN-201ENST00000339276 COL3A1P02461 1466 aaPredicted RBP22.6■■□□□ 1.21
SFN-201ENST00000339276 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
SFN-201ENST00000339276 SEPT12Q8IYM1 358 aa22.59■■□□□ 1.21
SFN-201ENST00000339276 USHBP1Q8N6Y0 703 aa22.59■■□□□ 1.21
SFN-201ENST00000339276 DISP2A7MBM2 1401 aa22.58■■□□□ 1.21
SFN-201ENST00000339276 PARP4Q9UKK3 1724 aaKnown RBP22.58■■□□□ 1.21
SFN-201ENST00000339276 LRRC37A3O60309 1634 aa22.57■■□□□ 1.2
SFN-201ENST00000339276 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
SFN-201ENST00000339276 RGPD1P0DJD0 1748 aa22.57■■□□□ 1.2
SFN-201ENST00000339276 EYA1Q99502 592 aa22.57■■□□□ 1.2
SFN-201ENST00000339276 NCAPD2Q15021 1401 aa22.56■■□□□ 1.2
SFN-201ENST00000339276 IL13P35225 146 aa22.56■■□□□ 1.2
SFN-201ENST00000339276 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
SFN-201ENST00000339276 MEGF6O75095 1541 aa22.53■■□□□ 1.2
SFN-201ENST00000339276 IGSF1Q8N6C5 1336 aa22.53■■□□□ 1.2
SFN-201ENST00000339276 DIAPH1O60610 1272 aaKnown RBP22.53■■□□□ 1.2
SFN-201ENST00000339276 IL2RBP14784 551 aa22.53■■□□□ 1.2
SFN-201ENST00000339276 CFAP53Q96M91 514 aa22.53■■□□□ 1.2
SFN-201ENST00000339276 CDCA7Q9BWT1 371 aaPredicted RBP22.52■■□□□ 1.2
SFN-201ENST00000339276 TNS2Q63HR2 1409 aa22.49■■□□□ 1.19
SFN-201ENST00000339276 DDB1Q16531 1140 aa22.49■■□□□ 1.19
SFN-201ENST00000339276 OVOS2A0A0G2JMS6 1433 aa22.48■■□□□ 1.19
SFN-201ENST00000339276 KRT27Q7Z3Y8 459 aa22.48■■□□□ 1.19
SFN-201ENST00000339276 AEBP1Q8IUX7 1158 aa22.48■■□□□ 1.19
SFN-201ENST00000339276 RAPGEF4Q8WZA2 1011 aa22.48■■□□□ 1.19
SFN-201ENST00000339276 ANP32CO43423 234 aa22.47■■□□□ 1.19
SFN-201ENST00000339276 SHANK3Q9BYB0 1731 aa22.47■■□□□ 1.19
SFN-201ENST00000339276 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
SFN-201ENST00000339276 KDRP35968 1356 aa22.45■■□□□ 1.18
SFN-201ENST00000339276 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
SFN-201ENST00000339276 PDE3BQ13370 1112 aa22.45■■□□□ 1.18
SFN-201ENST00000339276 FAM182BQ5T319 152 aa22.45■■□□□ 1.18
SFN-201ENST00000339276 SULT6B1Q6IMI4 303 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms