RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 FAM208AQ9UK61 1670 aaKnown RBP19.36■□□□□ 0.69
NIPAL3-202ENST00000339255 HSP90AB2PQ58FF8 381 aa19.36■□□□□ 0.69
NIPAL3-202ENST00000339255 RGPD5Q99666 1765 aa19.36■□□□□ 0.69
NIPAL3-202ENST00000339255 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
NIPAL3-202ENST00000339255 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
NIPAL3-202ENST00000339255 IL13P35225 146 aa19.34■□□□□ 0.69
NIPAL3-202ENST00000339255 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
NIPAL3-202ENST00000339255 ZC3H6P61129 1189 aaKnown RBP19.33■□□□□ 0.69
NIPAL3-202ENST00000339255 JCADQ9P266 1359 aa19.33■□□□□ 0.69
NIPAL3-202ENST00000339255 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.68
NIPAL3-202ENST00000339255 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.68
NIPAL3-202ENST00000339255 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
NIPAL3-202ENST00000339255 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
NIPAL3-202ENST00000339255 EIF4A2Q14240 407 aaKnown RBP19.33■□□□□ 0.68
NIPAL3-202ENST00000339255 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
NIPAL3-202ENST00000339255 COL14A1Q05707 1796 aaKnown RBP19.32■□□□□ 0.68
NIPAL3-202ENST00000339255 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
NIPAL3-202ENST00000339255 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
NIPAL3-202ENST00000339255 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
NIPAL3-202ENST00000339255 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
NIPAL3-202ENST00000339255 FCHSD2O94868 740 aa19.29■□□□□ 0.68
NIPAL3-202ENST00000339255 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.68
NIPAL3-202ENST00000339255 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.68
NIPAL3-202ENST00000339255 ERBB3P21860 1342 aa19.27■□□□□ 0.68
NIPAL3-202ENST00000339255 IGSF1Q8N6C5 1336 aa19.27■□□□□ 0.68
NIPAL3-202ENST00000339255 KDRP35968 1356 aa19.27■□□□□ 0.68
NIPAL3-202ENST00000339255 SPATA31A6Q5VVP1 1343 aa19.26■□□□□ 0.67
NIPAL3-202ENST00000339255 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
NIPAL3-202ENST00000339255 RUNDC1Q96C34 613 aa19.26■□□□□ 0.67
NIPAL3-202ENST00000339255 PLCH1Q4KWH8 1693 aa19.25■□□□□ 0.67
NIPAL3-202ENST00000339255 NEFMP07197 916 aa19.25■□□□□ 0.67
NIPAL3-202ENST00000339255 ANKRD24Q8TF21 1146 aa19.25■□□□□ 0.67
NIPAL3-202ENST00000339255 AXIN2Q9Y2T1 843 aa19.25■□□□□ 0.67
NIPAL3-202ENST00000339255 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
NIPAL3-202ENST00000339255 HSPA1LP34931 641 aa19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 CHRNA2Q15822 529 aa19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 RSPH6AQ9H0K4 717 aa19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 NWD2Q9ULI1 1742 aa19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 COL5A2P05997 1499 aaPredicted RBP19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 LTV1Q96GA3 475 aaPredicted RBP19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 EYA1Q99502 592 aa19.24■□□□□ 0.67
NIPAL3-202ENST00000339255 MAPK8IP3Q9UPT6 1336 aa19.23■□□□□ 0.67
NIPAL3-202ENST00000339255 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
NIPAL3-202ENST00000339255 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
NIPAL3-202ENST00000339255 PLEKHF1Q96S99 279 aa19.22■□□□□ 0.67
NIPAL3-202ENST00000339255 HMOX1P09601 288 aa19.21■□□□□ 0.67
NIPAL3-202ENST00000339255 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
NIPAL3-202ENST00000339255 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
NIPAL3-202ENST00000339255 PLEKHG2Q9H7P9 1386 aa19.21■□□□□ 0.67
NIPAL3-202ENST00000339255 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
NIPAL3-202ENST00000339255 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
NIPAL3-202ENST00000339255 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
NIPAL3-202ENST00000339255 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
NIPAL3-202ENST00000339255 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
NIPAL3-202ENST00000339255 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
NIPAL3-202ENST00000339255 APAF1O14727 1248 aa19.18■□□□□ 0.66
NIPAL3-202ENST00000339255 CSB-PGBD3P0DP91 1061 aa19.18■□□□□ 0.66
NIPAL3-202ENST00000339255 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
NIPAL3-202ENST00000339255 NBPF6Q5VWK0 638 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 AEBP1Q8IUX7 1158 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 NBPF4Q96M43 638 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 NLRP2Q9NX02 1062 aa19.17■□□□□ 0.66
NIPAL3-202ENST00000339255 BTG4Q9NY30 223 aa19.15■□□□□ 0.66
NIPAL3-202ENST00000339255 PARP4Q9UKK3 1724 aaKnown RBP19.15■□□□□ 0.66
NIPAL3-202ENST00000339255 SLIT2O94813 1529 aa19.15■□□□□ 0.66
NIPAL3-202ENST00000339255 LRP6O75581 1613 aa19.15■□□□□ 0.66
NIPAL3-202ENST00000339255 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.15■□□□□ 0.66
NIPAL3-202ENST00000339255 CRB1P82279 1406 aa19.14■□□□□ 0.66
NIPAL3-202ENST00000339255 EVA1CP58658 441 aa19.14■□□□□ 0.66
NIPAL3-202ENST00000339255 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
NIPAL3-202ENST00000339255 CCDC27Q2M243 656 aa19.13■□□□□ 0.65
NIPAL3-202ENST00000339255 TOM1L2Q6ZVM7 507 aa19.13■□□□□ 0.65
NIPAL3-202ENST00000339255 FBXO41Q8TF61 875 aa19.13■□□□□ 0.65
NIPAL3-202ENST00000339255 TMPOP42166 694 aaKnown RBP19.12■□□□□ 0.65
NIPAL3-202ENST00000339255 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
NIPAL3-202ENST00000339255 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
NIPAL3-202ENST00000339255 PHACTR3Q96KR7 559 aa19.12■□□□□ 0.65
NIPAL3-202ENST00000339255 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
NIPAL3-202ENST00000339255 PKD1L3Q7Z443 1732 aa19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 LMOD3Q0VAK6 560 aa19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 PDE3BQ13370 1112 aa19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 RAPGEF4Q8WZA2 1011 aa19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
NIPAL3-202ENST00000339255 GAS2L2Q8NHY3 880 aa19.1■□□□□ 0.65
NIPAL3-202ENST00000339255 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
NIPAL3-202ENST00000339255 AMOTQ4VCS5 1084 aa19.09■□□□□ 0.65
NIPAL3-202ENST00000339255 LARP1Q6PKG0 1096 aaKnown RBP19.09■□□□□ 0.65
NIPAL3-202ENST00000339255 NGLY1Q96IV0 654 aa19.08■□□□□ 0.65
NIPAL3-202ENST00000339255 RIPK4P57078 832 aa19.08■□□□□ 0.64
NIPAL3-202ENST00000339255 NEUROD2Q15784 382 aa19.08■□□□□ 0.64
NIPAL3-202ENST00000339255 WWC1Q8IX03 1113 aa19.08■□□□□ 0.64
NIPAL3-202ENST00000339255 C8orf37Q96NL8 207 aa19.08■□□□□ 0.64
NIPAL3-202ENST00000339255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.64
NIPAL3-202ENST00000339255 RRP7AQ9Y3A4 280 aaKnown RBP19.08■□□□□ 0.64
NIPAL3-202ENST00000339255 SALL2Q9Y467 1007 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms