RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 CRB1P82279 1406 aa16.37■□□□□ 0.21
TREM2-201ENST00000338469 NFAT5O94916 1531 aa16.37■□□□□ 0.21
TREM2-201ENST00000338469 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
TREM2-201ENST00000338469 PTF1AQ7RTS3 328 aa16.37■□□□□ 0.21
TREM2-201ENST00000338469 THRAP3Q9Y2W1 955 aaKnown RBP16.37■□□□□ 0.21
TREM2-201ENST00000338469 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
TREM2-201ENST00000338469 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
TREM2-201ENST00000338469 LRP5O75197 1615 aa16.35■□□□□ 0.21
TREM2-201ENST00000338469 ST20-MTHFSA0A0A6YYL1 179 aa16.35■□□□□ 0.21
TREM2-201ENST00000338469 APBA3O96018 575 aa16.35■□□□□ 0.21
TREM2-201ENST00000338469 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
TREM2-201ENST00000338469 PARP4Q9UKK3 1724 aaKnown RBP16.35■□□□□ 0.21
TREM2-201ENST00000338469 TOM1L2Q6ZVM7 507 aa16.34■□□□□ 0.21
TREM2-201ENST00000338469 WDR17Q8IZU2 1322 aa16.34■□□□□ 0.21
TREM2-201ENST00000338469 USP31Q70CQ4 1352 aa16.34■□□□□ 0.21
TREM2-201ENST00000338469 PEAK1Q9H792 1746 aa16.33■□□□□ 0.21
TREM2-201ENST00000338469 R3HDM1Q15032 1099 aaKnown RBP16.33■□□□□ 0.2
TREM2-201ENST00000338469 A0A1W2PP64 1363 aa16.32■□□□□ 0.2
TREM2-201ENST00000338469 MARCH10Q8NA82 808 aaPredicted RBP16.32■□□□□ 0.2
TREM2-201ENST00000338469 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
TREM2-201ENST00000338469 LRRC37A3O60309 1634 aa16.31■□□□□ 0.2
TREM2-201ENST00000338469 FBLN1P23142 703 aa16.3■□□□□ 0.2
TREM2-201ENST00000338469 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
TREM2-201ENST00000338469 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
TREM2-201ENST00000338469 DDB1Q16531 1140 aa16.28■□□□□ 0.2
TREM2-201ENST00000338469 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
TREM2-201ENST00000338469 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
TREM2-201ENST00000338469 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
TREM2-201ENST00000338469 CSB-PGBD3P0DP91 1061 aa16.27■□□□□ 0.2
TREM2-201ENST00000338469 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
TREM2-201ENST00000338469 RREB1Q92766 1687 aa16.27■□□□□ 0.19
TREM2-201ENST00000338469 OVOS2A0A0J9YW53 1432 aa16.27■□□□□ 0.19
TREM2-201ENST00000338469 OVOS2Q6IE36 1432 aa16.27■□□□□ 0.19
TREM2-201ENST00000338469 EDC4Q6P2E9 1401 aaKnown RBP16.27■□□□□ 0.19
TREM2-201ENST00000338469 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
TREM2-201ENST00000338469 PROM2Q8N271 834 aa16.26■□□□□ 0.19
TREM2-201ENST00000338469 OVOS2A0A0G2JMS6 1433 aa16.25■□□□□ 0.19
TREM2-201ENST00000338469 ERBB3P21860 1342 aa16.24■□□□□ 0.19
TREM2-201ENST00000338469 LTN1O94822 1766 aa16.24■□□□□ 0.19
TREM2-201ENST00000338469 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
TREM2-201ENST00000338469 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
TREM2-201ENST00000338469 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
TREM2-201ENST00000338469 KCNQ2O43526 872 aa16.22■□□□□ 0.19
TREM2-201ENST00000338469 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
TREM2-201ENST00000338469 USP47Q96K76 1375 aa16.22■□□□□ 0.19
TREM2-201ENST00000338469 ABCC6O95255 1503 aa16.21■□□□□ 0.19
TREM2-201ENST00000338469 EXOC5O00471 708 aa16.21■□□□□ 0.19
TREM2-201ENST00000338469 CDCA7Q9BWT1 371 aaPredicted RBP16.21■□□□□ 0.19
TREM2-201ENST00000338469 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
TREM2-201ENST00000338469 NLRP2Q9NX02 1062 aa16.21■□□□□ 0.19
TREM2-201ENST00000338469 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
TREM2-201ENST00000338469 BCL9O00512 1426 aa16.2■□□□□ 0.18
TREM2-201ENST00000338469 PLSCR1O15162 318 aa16.2■□□□□ 0.18
TREM2-201ENST00000338469 IP6K1Q92551 441 aa16.2■□□□□ 0.18
TREM2-201ENST00000338469 PDGFDQ9GZP0 370 aaPredicted RBP16.2■□□□□ 0.18
TREM2-201ENST00000338469 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
TREM2-201ENST00000338469 FYB1O15117 783 aa16.18■□□□□ 0.18
TREM2-201ENST00000338469 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
TREM2-201ENST00000338469 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
TREM2-201ENST00000338469 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
TREM2-201ENST00000338469 ACSBG1Q96GR2 724 aa16.17■□□□□ 0.18
TREM2-201ENST00000338469 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
TREM2-201ENST00000338469 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
TREM2-201ENST00000338469 NINLQ9Y2I6 1382 aa16.16■□□□□ 0.18
TREM2-201ENST00000338469 C11orf95C9JLR9 678 aaPredicted RBP16.16■□□□□ 0.18
TREM2-201ENST00000338469 IL2RBP14784 551 aa16.16■□□□□ 0.18
TREM2-201ENST00000338469 HOXC9P31274 260 aa16.16■□□□□ 0.18
TREM2-201ENST00000338469 TMF1P82094 1093 aa16.16■□□□□ 0.18
TREM2-201ENST00000338469 COG3Q96JB2 828 aa16.16■□□□□ 0.18
TREM2-201ENST00000338469 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
TREM2-201ENST00000338469 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
TREM2-201ENST00000338469 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
TREM2-201ENST00000338469 RGPD3A6NKT7 1758 aaPredicted RBP16.13■□□□□ 0.17
TREM2-201ENST00000338469 RGPD4Q7Z3J3 1758 aa16.13■□□□□ 0.17
TREM2-201ENST00000338469 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
TREM2-201ENST00000338469 EIF4G2P78344 907 aaKnown RBP eCLIP16.12■□□□□ 0.17
TREM2-201ENST00000338469 FAM208AQ9UK61 1670 aaKnown RBP16.11■□□□□ 0.17
TREM2-201ENST00000338469 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
TREM2-201ENST00000338469 NBPF6Q5VWK0 638 aa16.11■□□□□ 0.17
TREM2-201ENST00000338469 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
TREM2-201ENST00000338469 MYOM1P52179 1685 aa16.11■□□□□ 0.17
TREM2-201ENST00000338469 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
TREM2-201ENST00000338469 YY1P25490 414 aa16.1■□□□□ 0.17
TREM2-201ENST00000338469 AMPHP49418 695 aa16.1■□□□□ 0.17
TREM2-201ENST00000338469 USHBP1Q8N6Y0 703 aa16.1■□□□□ 0.17
TREM2-201ENST00000338469 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
TREM2-201ENST00000338469 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
TREM2-201ENST00000338469 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
TREM2-201ENST00000338469 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
TREM2-201ENST00000338469 MEGF6O75095 1541 aa16.09■□□□□ 0.17
TREM2-201ENST00000338469 KAT6BQ8WYB5 2073 aa16.08■□□□□ 0.16
TREM2-201ENST00000338469 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
TREM2-201ENST00000338469 BTAF1O14981 1849 aa16.08■□□□□ 0.16
TREM2-201ENST00000338469 SHANK3Q9BYB0 1731 aa16.07■□□□□ 0.16
TREM2-201ENST00000338469 NSD3Q9BZ95 1437 aa16.06■□□□□ 0.16
TREM2-201ENST00000338469 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
TREM2-201ENST00000338469 SLC15A2Q16348 729 aa16.06■□□□□ 0.16
TREM2-201ENST00000338469 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
TREM2-201ENST00000338469 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
TREM2-201ENST00000338469 PTGER2P43116 358 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms