RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
CDK5RAP3-201ENST00000338399 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-201ENST00000338399 IQSEC2Q5JU85 1478 aa19.47■□□□□ 0.71
CDK5RAP3-201ENST00000338399 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
CDK5RAP3-201ENST00000338399 PHRF1Q9P1Y6 1649 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-201ENST00000338399 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
CDK5RAP3-201ENST00000338399 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-201ENST00000338399 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
CDK5RAP3-201ENST00000338399 ARHGEF25Q86VW2 580 aa19.46■□□□□ 0.71
CDK5RAP3-201ENST00000338399 IP6K1Q92551 441 aa19.46■□□□□ 0.71
CDK5RAP3-201ENST00000338399 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
CDK5RAP3-201ENST00000338399 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
CDK5RAP3-201ENST00000338399 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
CDK5RAP3-201ENST00000338399 CRYBG1Q9Y4K1 1723 aa19.45■□□□□ 0.7
CDK5RAP3-201ENST00000338399 NGEFQ8N5V2 710 aa19.45■□□□□ 0.7
CDK5RAP3-201ENST00000338399 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-201ENST00000338399 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
CDK5RAP3-201ENST00000338399 LTV1Q96GA3 475 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-201ENST00000338399 ZNF521Q96K83 1311 aa19.44■□□□□ 0.7
CDK5RAP3-201ENST00000338399 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
CDK5RAP3-201ENST00000338399 SULT6B1Q6IMI4 303 aa19.43■□□□□ 0.7
CDK5RAP3-201ENST00000338399 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
CDK5RAP3-201ENST00000338399 TOM1O60784 492 aa19.41■□□□□ 0.7
CDK5RAP3-201ENST00000338399 NEFMP07197 916 aa19.41■□□□□ 0.7
CDK5RAP3-201ENST00000338399 EYA1Q99502 592 aa19.41■□□□□ 0.7
CDK5RAP3-201ENST00000338399 TMPOP42166 694 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-201ENST00000338399 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
CDK5RAP3-201ENST00000338399 RGPD5Q99666 1765 aa19.41■□□□□ 0.7
CDK5RAP3-201ENST00000338399 AHDC1Q5TGY3 1603 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-201ENST00000338399 WWC1Q8IX03 1113 aa19.4■□□□□ 0.7
CDK5RAP3-201ENST00000338399 GOLGA2Q08379 1002 aa19.39■□□□□ 0.7
CDK5RAP3-201ENST00000338399 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
CDK5RAP3-201ENST00000338399 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
CDK5RAP3-201ENST00000338399 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-201ENST00000338399 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
CDK5RAP3-201ENST00000338399 CCDC27Q2M243 656 aa19.37■□□□□ 0.69
CDK5RAP3-201ENST00000338399 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-201ENST00000338399 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
CDK5RAP3-201ENST00000338399 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
CDK5RAP3-201ENST00000338399 RIPK4P57078 832 aa19.37■□□□□ 0.69
CDK5RAP3-201ENST00000338399 LRRC59Q96AG4 307 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-201ENST00000338399 COL18A1P39060 1754 aa19.36■□□□□ 0.69
CDK5RAP3-201ENST00000338399 UBAP1LF5GYI3 381 aa19.36■□□□□ 0.69
CDK5RAP3-201ENST00000338399 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
CDK5RAP3-201ENST00000338399 KIAA0232Q92628 1395 aa19.36■□□□□ 0.69
CDK5RAP3-201ENST00000338399 NFE2L2Q16236 605 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 ANKRD24Q8TF21 1146 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 KDRP35968 1356 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 PHLPP1O60346 1717 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 CHRNA2Q15822 529 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 CPDO75976 1380 aa19.35■□□□□ 0.69
CDK5RAP3-201ENST00000338399 DLG5Q8TDM6 1919 aa19.34■□□□□ 0.69
CDK5RAP3-201ENST00000338399 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
CDK5RAP3-201ENST00000338399 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
CDK5RAP3-201ENST00000338399 USHBP1Q8N6Y0 703 aa19.34■□□□□ 0.69
CDK5RAP3-201ENST00000338399 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
CDK5RAP3-201ENST00000338399 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.69
CDK5RAP3-201ENST00000338399 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
CDK5RAP3-201ENST00000338399 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-201ENST00000338399 DUSP27Q5VZP5 1158 aa19.32■□□□□ 0.68
CDK5RAP3-201ENST00000338399 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
CDK5RAP3-201ENST00000338399 E9PSI1 815 aa19.31■□□□□ 0.68
CDK5RAP3-201ENST00000338399 COL16A1Q07092 1604 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-201ENST00000338399 ABCC6O95255 1503 aa19.31■□□□□ 0.68
CDK5RAP3-201ENST00000338399 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-201ENST00000338399 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
CDK5RAP3-201ENST00000338399 ERBB3P21860 1342 aa19.3■□□□□ 0.68
CDK5RAP3-201ENST00000338399 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
CDK5RAP3-201ENST00000338399 MTHFSDQ2M296 383 aaKnown RBP19.27■□□□□ 0.68
CDK5RAP3-201ENST00000338399 CAMTA1Q9Y6Y1 1673 aa19.27■□□□□ 0.68
CDK5RAP3-201ENST00000338399 CSB-PGBD3P0DP91 1061 aa19.26■□□□□ 0.67
CDK5RAP3-201ENST00000338399 LMO7Q8WWI1 1683 aa19.26■□□□□ 0.67
CDK5RAP3-201ENST00000338399 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
CDK5RAP3-201ENST00000338399 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
CDK5RAP3-201ENST00000338399 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
CDK5RAP3-201ENST00000338399 FAM208AQ9UK61 1670 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-201ENST00000338399 FAM83GA6ND36 823 aa19.24■□□□□ 0.67
CDK5RAP3-201ENST00000338399 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
CDK5RAP3-201ENST00000338399 THUMPD2Q9BTF0 503 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-201ENST00000338399 RCAN3Q9UKA8 241 aa19.24■□□□□ 0.67
CDK5RAP3-201ENST00000338399 IL16Q14005 1332 aa19.23■□□□□ 0.67
CDK5RAP3-201ENST00000338399 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-201ENST00000338399 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
CDK5RAP3-201ENST00000338399 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
CDK5RAP3-201ENST00000338399 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-201ENST00000338399 NEFLP07196 543 aa19.2■□□□□ 0.66
CDK5RAP3-201ENST00000338399 CALD1Q05682 793 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-201ENST00000338399 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-201ENST00000338399 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
CDK5RAP3-201ENST00000338399 MCM10Q7L590 875 aa19.19■□□□□ 0.66
CDK5RAP3-201ENST00000338399 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-201ENST00000338399 FANCIQ9NVI1 1328 aa19.19■□□□□ 0.66
CDK5RAP3-201ENST00000338399 COL14A1Q05707 1796 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-201ENST00000338399 EVA1CP58658 441 aa19.18■□□□□ 0.66
CDK5RAP3-201ENST00000338399 FKBP8Q14318 412 aa19.18■□□□□ 0.66
CDK5RAP3-201ENST00000338399 PLEKHO1Q53GL0 409 aaPredicted RBP19.18■□□□□ 0.66
CDK5RAP3-201ENST00000338399 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
CDK5RAP3-201ENST00000338399 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms