RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 EIF4A2Q14240 407 aaKnown RBP16.09■□□□□ 0.17
TRIM49B-201ENST00000332682 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
TRIM49B-201ENST00000332682 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
TRIM49B-201ENST00000332682 COL22A1Q8NFW1 1626 aaPredicted RBP16.08■□□□□ 0.17
TRIM49B-201ENST00000332682 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
TRIM49B-201ENST00000332682 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
TRIM49B-201ENST00000332682 CPDO75976 1380 aa16.06■□□□□ 0.16
TRIM49B-201ENST00000332682 ABCC6O95255 1503 aa16.06■□□□□ 0.16
TRIM49B-201ENST00000332682 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
TRIM49B-201ENST00000332682 IP6K1Q92551 441 aa16.06■□□□□ 0.16
TRIM49B-201ENST00000332682 COL18A1P39060 1754 aa16.06■□□□□ 0.16
TRIM49B-201ENST00000332682 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
TRIM49B-201ENST00000332682 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
TRIM49B-201ENST00000332682 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
TRIM49B-201ENST00000332682 RGPD5Q99666 1765 aa16.04■□□□□ 0.16
TRIM49B-201ENST00000332682 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
TRIM49B-201ENST00000332682 KIAA0232Q92628 1395 aa16.03■□□□□ 0.16
TRIM49B-201ENST00000332682 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
TRIM49B-201ENST00000332682 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.15
TRIM49B-201ENST00000332682 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.15
TRIM49B-201ENST00000332682 RSPH6AQ9H0K4 717 aa16.02■□□□□ 0.15
TRIM49B-201ENST00000332682 LMO7Q8WWI1 1683 aa16.01■□□□□ 0.15
TRIM49B-201ENST00000332682 FCHSD2O94868 740 aa16.01■□□□□ 0.15
TRIM49B-201ENST00000332682 HMOX1P09601 288 aa16.01■□□□□ 0.15
TRIM49B-201ENST00000332682 AXIN2Q9Y2T1 843 aa16.01■□□□□ 0.15
TRIM49B-201ENST00000332682 IGSF1Q8N6C5 1336 aa16.01■□□□□ 0.15
TRIM49B-201ENST00000332682 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
TRIM49B-201ENST00000332682 APAF1O14727 1248 aa16■□□□□ 0.15
TRIM49B-201ENST00000332682 KDRP35968 1356 aa16■□□□□ 0.15
TRIM49B-201ENST00000332682 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
TRIM49B-201ENST00000332682 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 HAP1P54257 671 aaPredicted RBP15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 AEBP1Q8IUX7 1158 aa15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 EYA1Q99502 592 aa15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 ERBB3P21860 1342 aa15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 CHRNA2Q15822 529 aa15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
TRIM49B-201ENST00000332682 FAM208AQ9UK61 1670 aaKnown RBP15.98■□□□□ 0.15
TRIM49B-201ENST00000332682 TCP11L2Q8N4U5 519 aa15.98■□□□□ 0.15
TRIM49B-201ENST00000332682 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
TRIM49B-201ENST00000332682 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
TRIM49B-201ENST00000332682 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
TRIM49B-201ENST00000332682 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
TRIM49B-201ENST00000332682 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
TRIM49B-201ENST00000332682 ZNF521Q96K83 1311 aa15.95■□□□□ 0.14
TRIM49B-201ENST00000332682 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
TRIM49B-201ENST00000332682 COL14A1Q05707 1796 aaKnown RBP15.94■□□□□ 0.14
TRIM49B-201ENST00000332682 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
TRIM49B-201ENST00000332682 PHACTR3Q96KR7 559 aa15.94■□□□□ 0.14
TRIM49B-201ENST00000332682 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
TRIM49B-201ENST00000332682 RRP7AQ9Y3A4 280 aaKnown RBP15.94■□□□□ 0.14
TRIM49B-201ENST00000332682 COL5A2P05997 1499 aaPredicted RBP15.94■□□□□ 0.14
TRIM49B-201ENST00000332682 JCADQ9P266 1359 aa15.93■□□□□ 0.14
TRIM49B-201ENST00000332682 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
TRIM49B-201ENST00000332682 NEFMP07197 916 aa15.93■□□□□ 0.14
TRIM49B-201ENST00000332682 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
TRIM49B-201ENST00000332682 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
TRIM49B-201ENST00000332682 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
TRIM49B-201ENST00000332682 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
TRIM49B-201ENST00000332682 USHBP1Q8N6Y0 703 aa15.92■□□□□ 0.14
TRIM49B-201ENST00000332682 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
TRIM49B-201ENST00000332682 PLCH1Q4KWH8 1693 aa15.91■□□□□ 0.14
TRIM49B-201ENST00000332682 NFE2L2Q16236 605 aa15.9■□□□□ 0.14
TRIM49B-201ENST00000332682 WWC1Q8IX03 1113 aa15.9■□□□□ 0.14
TRIM49B-201ENST00000332682 HSPA1LP34931 641 aa15.89■□□□□ 0.13
TRIM49B-201ENST00000332682 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
TRIM49B-201ENST00000332682 WDR17Q8IZU2 1322 aa15.89■□□□□ 0.13
TRIM49B-201ENST00000332682 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
TRIM49B-201ENST00000332682 RIPK4P57078 832 aa15.88■□□□□ 0.13
TRIM49B-201ENST00000332682 CDCA7LQ96GN5 454 aa15.88■□□□□ 0.13
TRIM49B-201ENST00000332682 NLRP2Q9NX02 1062 aa15.88■□□□□ 0.13
TRIM49B-201ENST00000332682 TRIM35Q9UPQ4 493 aa15.88■□□□□ 0.13
TRIM49B-201ENST00000332682 NRAPQ86VF7 1730 aa15.87■□□□□ 0.13
TRIM49B-201ENST00000332682 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
TRIM49B-201ENST00000332682 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
TRIM49B-201ENST00000332682 ADAMTS2O95450 1211 aa15.87■□□□□ 0.13
TRIM49B-201ENST00000332682 NUTM2AQ8IVF1 878 aaPredicted RBP15.87■□□□□ 0.13
TRIM49B-201ENST00000332682 GOLGA2Q08379 1002 aa15.86■□□□□ 0.13
TRIM49B-201ENST00000332682 BTG4Q9NY30 223 aa15.86■□□□□ 0.13
TRIM49B-201ENST00000332682 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
TRIM49B-201ENST00000332682 NWD2Q9ULI1 1742 aa15.86■□□□□ 0.13
TRIM49B-201ENST00000332682 LRP6O75581 1613 aa15.86■□□□□ 0.13
TRIM49B-201ENST00000332682 MEGF6O75095 1541 aa15.85■□□□□ 0.13
TRIM49B-201ENST00000332682 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
TRIM49B-201ENST00000332682 WDR63Q8IWG1 891 aa15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 GAS2L2Q8NHY3 880 aa15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 PLEKHG2Q9H7P9 1386 aa15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 CRB1P82279 1406 aa15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 LARP1Q6PKG0 1096 aaKnown RBP15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 TOM1L2Q6ZVM7 507 aa15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
TRIM49B-201ENST00000332682 SLIT2O94813 1529 aa15.83■□□□□ 0.13
TRIM49B-201ENST00000332682 EVA1CP58658 441 aa15.83■□□□□ 0.12
TRIM49B-201ENST00000332682 SLFN5Q08AF3 891 aa15.83■□□□□ 0.12
TRIM49B-201ENST00000332682 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
TRIM49B-201ENST00000332682 PKD1L3Q7Z443 1732 aa15.83■□□□□ 0.12
TRIM49B-201ENST00000332682 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms