RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 COL5A2P05997 1499 aaPredicted RBP28.72■■■□□ 2.19
YBX1-202ENST00000332220 AMER1Q5JTC6 1135 aaPredicted RBP28.72■■■□□ 2.19
YBX1-202ENST00000332220 AXIN2Q9Y2T1 843 aa28.71■■■□□ 2.19
YBX1-202ENST00000332220 RGPD2P0DJD1 1756 aa28.7■■■□□ 2.18
YBX1-202ENST00000332220 MAP3K19Q56UN5 1328 aa28.69■■■□□ 2.18
YBX1-202ENST00000332220 VPS72Q15906 364 aa28.69■■■□□ 2.18
YBX1-202ENST00000332220 STRN4Q9NRL3 753 aa28.69■■■□□ 2.18
YBX1-202ENST00000332220 RRS1Q15050 365 aaKnown RBP28.68■■■□□ 2.18
YBX1-202ENST00000332220 ILDR2Q71H61 639 aa28.68■■■□□ 2.18
YBX1-202ENST00000332220 RXRBP28702 533 aa28.66■■■□□ 2.18
YBX1-202ENST00000332220 WNK3Q9BYP7 1800 aa28.66■■■□□ 2.18
YBX1-202ENST00000332220 BRWD3Q6RI45 1802 aa28.65■■■□□ 2.18
YBX1-202ENST00000332220 RBM6P78332 1123 aaKnown RBP28.65■■■□□ 2.18
YBX1-202ENST00000332220 GJD4Q96KN9 370 aaPredicted RBP28.65■■■□□ 2.18
YBX1-202ENST00000332220 EVA1CP58658 441 aa28.64■■■□□ 2.18
YBX1-202ENST00000332220 CCDC9Q9Y3X0 531 aaKnown RBP28.64■■■□□ 2.18
YBX1-202ENST00000332220 FAM208AQ9UK61 1670 aaKnown RBP28.64■■■□□ 2.17
YBX1-202ENST00000332220 TNNT2P45379 298 aaPredicted RBP28.63■■■□□ 2.17
YBX1-202ENST00000332220 NPC1L1Q9UHC9 1359 aa28.62■■■□□ 2.17
YBX1-202ENST00000332220 CC2D1BQ5T0F9 858 aaKnown RBP28.62■■■□□ 2.17
YBX1-202ENST00000332220 LARP1Q6PKG0 1096 aaKnown RBP28.62■■■□□ 2.17
YBX1-202ENST00000332220 MORC1Q86VD1 984 aa28.62■■■□□ 2.17
YBX1-202ENST00000332220 IP6K1Q92551 441 aa28.62■■■□□ 2.17
YBX1-202ENST00000332220 SPATA31A5Q5VU36 1347 aa28.62■■■□□ 2.17
YBX1-202ENST00000332220 SPATA31A7Q8IWB4 1347 aa28.62■■■□□ 2.17
YBX1-202ENST00000332220 BLMP54132 1417 aaPredicted RBP28.61■■■□□ 2.17
YBX1-202ENST00000332220 EMILIN1Q9Y6C2 1016 aa28.61■■■□□ 2.17
YBX1-202ENST00000332220 RTL1A6NKG5 1358 aa28.61■■■□□ 2.17
YBX1-202ENST00000332220 CDK12Q9NYV4 1490 aaPredicted RBP28.6■■■□□ 2.17
YBX1-202ENST00000332220 HOXC9P31274 260 aa28.6■■■□□ 2.17
YBX1-202ENST00000332220 AMPHP49418 695 aa28.6■■■□□ 2.17
YBX1-202ENST00000332220 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
YBX1-202ENST00000332220 RGS12O14924 1447 aa28.6■■■□□ 2.17
YBX1-202ENST00000332220 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
YBX1-202ENST00000332220 CNGB1Q14028 1251 aaPredicted RBP28.59■■■□□ 2.17
YBX1-202ENST00000332220 CRB1P82279 1406 aa28.59■■■□□ 2.17
YBX1-202ENST00000332220 SPATA31A1Q5TZJ5 1347 aa28.58■■■□□ 2.17
YBX1-202ENST00000332220 WDR17Q8IZU2 1322 aa28.58■■■□□ 2.17
YBX1-202ENST00000332220 POLKQ9UBT6 870 aa28.57■■■□□ 2.16
YBX1-202ENST00000332220 ERBB3P21860 1342 aa28.57■■■□□ 2.16
YBX1-202ENST00000332220 THSD7AQ9UPZ6 1657 aa28.57■■■□□ 2.16
YBX1-202ENST00000332220 FLT4P35916 1363 aa28.56■■■□□ 2.16
YBX1-202ENST00000332220 KIF24Q5T7B8 1368 aa28.56■■■□□ 2.16
YBX1-202ENST00000332220 SMG6Q86US8 1419 aaKnown RBP28.55■■■□□ 2.16
YBX1-202ENST00000332220 ANKRD24Q8TF21 1146 aa28.55■■■□□ 2.16
YBX1-202ENST00000332220 CSB-PGBD3P0DP91 1061 aa28.53■■■□□ 2.16
YBX1-202ENST00000332220 TOM1L2Q6ZVM7 507 aa28.53■■■□□ 2.16
YBX1-202ENST00000332220 LTV1Q96GA3 475 aaPredicted RBP28.53■■■□□ 2.16
YBX1-202ENST00000332220 USP35Q9P2H5 1018 aa28.53■■■□□ 2.16
YBX1-202ENST00000332220 INSRP06213 1382 aa28.52■■■□□ 2.16
YBX1-202ENST00000332220 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
YBX1-202ENST00000332220 FAM98CQ17RN3 349 aaKnown RBP28.52■■■□□ 2.16
YBX1-202ENST00000332220 HSP90AB2PQ58FF8 381 aa28.52■■■□□ 2.16
YBX1-202ENST00000332220 PARP4Q9UKK3 1724 aaKnown RBP28.51■■■□□ 2.15
YBX1-202ENST00000332220 ONECUT3O60422 494 aaPredicted RBP28.48■■■□□ 2.15
YBX1-202ENST00000332220 TCP11L2Q8N4U5 519 aa28.48■■■□□ 2.15
YBX1-202ENST00000332220 CARD10Q9BWT7 1032 aa28.48■■■□□ 2.15
YBX1-202ENST00000332220 NLRP2Q9NX02 1062 aa28.46■■■□□ 2.15
YBX1-202ENST00000332220 LRRC37A3O60309 1634 aa28.46■■■□□ 2.15
YBX1-202ENST00000332220 BARGINQ6ZT62 677 aa28.45■■■□□ 2.14
YBX1-202ENST00000332220 SEPT12Q8IYM1 358 aa28.45■■■□□ 2.14
YBX1-202ENST00000332220 THRAP3Q9Y2W1 955 aaKnown RBP28.44■■■□□ 2.14
YBX1-202ENST00000332220 A0A0G2JS52 829 aa28.42■■■□□ 2.14
YBX1-202ENST00000332220 MYT1Q01538 1121 aa28.42■■■□□ 2.14
YBX1-202ENST00000332220 DISP2A7MBM2 1401 aa28.42■■■□□ 2.14
YBX1-202ENST00000332220 RGPD1P0DJD0 1748 aa28.4■■■□□ 2.14
YBX1-202ENST00000332220 PARD3Q8TEW0 1356 aa28.4■■■□□ 2.14
YBX1-202ENST00000332220 MTHFSP49914 203 aa28.4■■■□□ 2.14
YBX1-202ENST00000332220 NBPF6Q5VWK0 638 aa28.39■■■□□ 2.14
YBX1-202ENST00000332220 NBPF4Q96M43 638 aa28.39■■■□□ 2.14
YBX1-202ENST00000332220 EIF4A2Q14240 407 aaKnown RBP28.38■■■□□ 2.13
YBX1-202ENST00000332220 USHBP1Q8N6Y0 703 aa28.37■■■□□ 2.13
YBX1-202ENST00000332220 SHANK3Q9BYB0 1731 aa28.37■■■□□ 2.13
YBX1-202ENST00000332220 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
YBX1-202ENST00000332220 COL3A1P02461 1466 aaPredicted RBP28.35■■■□□ 2.13
YBX1-202ENST00000332220 PPP2R1AP30153 589 aa28.35■■■□□ 2.13
YBX1-202ENST00000332220 MEGF6O75095 1541 aa28.33■■■□□ 2.13
YBX1-202ENST00000332220 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
YBX1-202ENST00000332220 EYA1Q99502 592 aa28.32■■■□□ 2.12
YBX1-202ENST00000332220 EP400Q96L91 3159 aa28.32■■■□□ 2.12
YBX1-202ENST00000332220 CDCA7Q9BWT1 371 aaPredicted RBP28.31■■■□□ 2.12
YBX1-202ENST00000332220 SBF2Q86WG5 1849 aa28.31■■■□□ 2.12
YBX1-202ENST00000332220 KAT6BQ8WYB5 2073 aa28.31■■■□□ 2.12
YBX1-202ENST00000332220 IL2RBP14784 551 aa28.3■■■□□ 2.12
YBX1-202ENST00000332220 PKD1L3Q7Z443 1732 aa28.29■■■□□ 2.12
YBX1-202ENST00000332220 TNS2Q63HR2 1409 aa28.29■■■□□ 2.12
YBX1-202ENST00000332220 IL13P35225 146 aa28.28■■■□□ 2.12
YBX1-202ENST00000332220 IGSF1Q8N6C5 1336 aa28.27■■■□□ 2.12
YBX1-202ENST00000332220 RALBP1Q15311 655 aa28.27■■■□□ 2.12
YBX1-202ENST00000332220 DDB1Q16531 1140 aa28.27■■■□□ 2.12
YBX1-202ENST00000332220 FAM182BQ5T319 152 aa28.27■■■□□ 2.12
YBX1-202ENST00000332220 OVOS2A0A0G2JMS6 1433 aa28.25■■■□□ 2.11
YBX1-202ENST00000332220 PDE3BQ13370 1112 aa28.24■■■□□ 2.11
YBX1-202ENST00000332220 DIAPH1O60610 1272 aaKnown RBP28.23■■■□□ 2.11
YBX1-202ENST00000332220 EXOC5O00471 708 aa28.22■■■□□ 2.11
YBX1-202ENST00000332220 RAPGEF4Q8WZA2 1011 aa28.22■■■□□ 2.11
YBX1-202ENST00000332220 PRKRIP1Q9H875 184 aaPredicted RBP28.22■■■□□ 2.11
YBX1-202ENST00000332220 SOCS7O14512 581 aa28.21■■■□□ 2.11
YBX1-202ENST00000332220 TATP17735 454 aaPredicted RBP28.2■■■□□ 2.1
YBX1-202ENST00000332220 AEBP1Q8IUX7 1158 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms