RNA–Protein interactions for RNA: ENST00000330953.5

CCR4-201, Transcript of C-C motif chemokine receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR4, Length 3,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR4-201ENST00000330953 CCDC27Q2M243 656 aa12□□□□□ -0.49
CCR4-201ENST00000330953 KCNH5Q8NCM2 988 aa12□□□□□ -0.49
CCR4-201ENST00000330953 SLIT2O94813 1529 aa11.99□□□□□ -0.49
CCR4-201ENST00000330953 BCL9O00512 1426 aa11.99□□□□□ -0.49
CCR4-201ENST00000330953 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
CCR4-201ENST00000330953 SLAIN2Q9P270 581 aa11.98□□□□□ -0.49
CCR4-201ENST00000330953 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
CCR4-201ENST00000330953 ATF3P18847 181 aa11.97□□□□□ -0.49
CCR4-201ENST00000330953 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
CCR4-201ENST00000330953 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
CCR4-201ENST00000330953 GLI3P10071 1580 aa11.97□□□□□ -0.49
CCR4-201ENST00000330953 IBTKQ9P2D0 1353 aaPredicted RBP11.95□□□□□ -0.5
CCR4-201ENST00000330953 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
CCR4-201ENST00000330953 COL5A2P05997 1499 aaPredicted RBP11.94□□□□□ -0.5
CCR4-201ENST00000330953 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
CCR4-201ENST00000330953 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
CCR4-201ENST00000330953 IL13P35225 146 aa11.93□□□□□ -0.5
CCR4-201ENST00000330953 ARHGEF25Q86VW2 580 aa11.93□□□□□ -0.5
CCR4-201ENST00000330953 PLEKHF1Q96S99 279 aa11.93□□□□□ -0.5
CCR4-201ENST00000330953 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
CCR4-201ENST00000330953 HIRIP3Q9BW71 556 aaPredicted RBP11.93□□□□□ -0.5
CCR4-201ENST00000330953 COG3Q96JB2 828 aa11.92□□□□□ -0.5
CCR4-201ENST00000330953 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
CCR4-201ENST00000330953 IP6K1Q92551 441 aa11.92□□□□□ -0.5
CCR4-201ENST00000330953 IL16Q14005 1332 aa11.91□□□□□ -0.5
CCR4-201ENST00000330953 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
CCR4-201ENST00000330953 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
CCR4-201ENST00000330953 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
CCR4-201ENST00000330953 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
CCR4-201ENST00000330953 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
CCR4-201ENST00000330953 PNNQ9H307 717 aaKnown RBP11.9□□□□□ -0.5
CCR4-201ENST00000330953 QSER1Q2KHR3 1735 aa11.9□□□□□ -0.5
CCR4-201ENST00000330953 PDE3BQ13370 1112 aa11.9□□□□□ -0.51
CCR4-201ENST00000330953 ANP32EQ9BTT0 268 aa11.9□□□□□ -0.51
CCR4-201ENST00000330953 NHSQ6T4R5 1651 aa11.9□□□□□ -0.51
CCR4-201ENST00000330953 JCADQ9P266 1359 aa11.89□□□□□ -0.51
CCR4-201ENST00000330953 HTATSF1O43719 755 aaKnown RBP11.89□□□□□ -0.51
CCR4-201ENST00000330953 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
CCR4-201ENST00000330953 FCHSD2O94868 740 aa11.89□□□□□ -0.51
CCR4-201ENST00000330953 BABAM1Q9NWV8 329 aa11.89□□□□□ -0.51
CCR4-201ENST00000330953 ORAI2Q96SN7 254 aa11.88□□□□□ -0.51
CCR4-201ENST00000330953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCR4-201ENST00000330953 SBF2Q86WG5 1849 aa11.88□□□□□ -0.51
CCR4-201ENST00000330953 TOM1O60784 492 aa11.88□□□□□ -0.51
CCR4-201ENST00000330953 NME9Q86XW9 330 aa11.88□□□□□ -0.51
CCR4-201ENST00000330953 SOS1Q07889 1333 aaPredicted RBP11.87□□□□□ -0.51
CCR4-201ENST00000330953 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
CCR4-201ENST00000330953 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
CCR4-201ENST00000330953 ITGB4P16144 1822 aa11.87□□□□□ -0.51
CCR4-201ENST00000330953 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
CCR4-201ENST00000330953 MAP3K19Q56UN5 1328 aa11.86□□□□□ -0.51
CCR4-201ENST00000330953 LY75O60449 1722 aa11.86□□□□□ -0.51
CCR4-201ENST00000330953 HOXC9P31274 260 aa11.85□□□□□ -0.51
CCR4-201ENST00000330953 NGDNQ8NEJ9 315 aaKnown RBP11.85□□□□□ -0.51
CCR4-201ENST00000330953 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
CCR4-201ENST00000330953 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
CCR4-201ENST00000330953 RNF123Q5XPI4 1314 aa11.85□□□□□ -0.51
CCR4-201ENST00000330953 ATRNO75882 1429 aa11.85□□□□□ -0.51
CCR4-201ENST00000330953 COL5A3P25940 1745 aaPredicted RBP11.85□□□□□ -0.51
CCR4-201ENST00000330953 COL24A1Q17RW2 1714 aa11.84□□□□□ -0.51
CCR4-201ENST00000330953 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
CCR4-201ENST00000330953 CEMIPQ8WUJ3 1361 aa11.84□□□□□ -0.51
CCR4-201ENST00000330953 C5P01031 1676 aa11.84□□□□□ -0.51
CCR4-201ENST00000330953 CRB1P82279 1406 aa11.83□□□□□ -0.51
CCR4-201ENST00000330953 SAFB2Q14151 953 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCR4-201ENST00000330953 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
CCR4-201ENST00000330953 GCP02774 474 aa11.82□□□□□ -0.52
CCR4-201ENST00000330953 MTHFSP49914 203 aa11.82□□□□□ -0.52
CCR4-201ENST00000330953 WDR63Q8IWG1 891 aa11.82□□□□□ -0.52
CCR4-201ENST00000330953 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
CCR4-201ENST00000330953 THRAP3Q9Y2W1 955 aaKnown RBP11.82□□□□□ -0.52
CCR4-201ENST00000330953 ERBB3P21860 1342 aa11.81□□□□□ -0.52
CCR4-201ENST00000330953 CT47B1P0C2W7 299 aaPredicted RBP11.81□□□□□ -0.52
CCR4-201ENST00000330953 DIAPH1O60610 1272 aaKnown RBP11.8□□□□□ -0.52
CCR4-201ENST00000330953 CCDC184Q52MB2 194 aa11.8□□□□□ -0.52
CCR4-201ENST00000330953 TNS2Q63HR2 1409 aa11.8□□□□□ -0.52
CCR4-201ENST00000330953 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
CCR4-201ENST00000330953 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
CCR4-201ENST00000330953 BCL9LQ86UU0 1499 aa11.8□□□□□ -0.52
CCR4-201ENST00000330953 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
CCR4-201ENST00000330953 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
CCR4-201ENST00000330953 TJP1Q07157 1748 aa11.79□□□□□ -0.52
CCR4-201ENST00000330953 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
CCR4-201ENST00000330953 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
CCR4-201ENST00000330953 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
CCR4-201ENST00000330953 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
CCR4-201ENST00000330953 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
CCR4-201ENST00000330953 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
CCR4-201ENST00000330953 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
CCR4-201ENST00000330953 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
CCR4-201ENST00000330953 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
CCR4-201ENST00000330953 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
CCR4-201ENST00000330953 BARGINQ6ZT62 677 aa11.77□□□□□ -0.53
CCR4-201ENST00000330953 CDCA7Q9BWT1 371 aaPredicted RBP11.77□□□□□ -0.53
CCR4-201ENST00000330953 BCL11AQ9H165 835 aa11.77□□□□□ -0.53
CCR4-201ENST00000330953 MRS2Q9HD23 443 aa11.77□□□□□ -0.53
CCR4-201ENST00000330953 KIAA0232Q92628 1395 aa11.77□□□□□ -0.53
CCR4-201ENST00000330953 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
CCR4-201ENST00000330953 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
CCR4-201ENST00000330953 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms