RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 EN1Q05925 392 aaPredicted RBP25.57■■□□□ 1.68
RAB28-202ENST00000330852 TOM1L2Q6ZVM7 507 aa25.56■■□□□ 1.68
RAB28-202ENST00000330852 NFAT5O94916 1531 aa25.56■■□□□ 1.68
RAB28-202ENST00000330852 TRIM37O94972 964 aa25.55■■□□□ 1.68
RAB28-202ENST00000330852 NINLQ9Y2I6 1382 aa25.55■■□□□ 1.68
RAB28-202ENST00000330852 CDCA7Q9BWT1 371 aaPredicted RBP25.54■■□□□ 1.68
RAB28-202ENST00000330852 SLC12A5Q9H2X9 1139 aa25.54■■□□□ 1.68
RAB28-202ENST00000330852 AXIN2Q9Y2T1 843 aa25.54■■□□□ 1.68
RAB28-202ENST00000330852 PARD3Q8TEW0 1356 aa25.54■■□□□ 1.68
RAB28-202ENST00000330852 EDC4Q6P2E9 1401 aaKnown RBP25.54■■□□□ 1.68
RAB28-202ENST00000330852 TESK2Q96S53 571 aa25.54■■□□□ 1.68
RAB28-202ENST00000330852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.53■■□□□ 1.683e-7■■■■□ 22.8
RAB28-202ENST00000330852 ST20-MTHFSA0A0A6YYL1 179 aa25.52■■□□□ 1.68
RAB28-202ENST00000330852 WNK3Q9BYP7 1800 aa25.52■■□□□ 1.68
RAB28-202ENST00000330852 CARD10Q9BWT7 1032 aa25.51■■□□□ 1.67
RAB28-202ENST00000330852 SOX12O15370 315 aa25.5■■□□□ 1.67
RAB28-202ENST00000330852 CAMKK2Q96RR4 588 aa25.5■■□□□ 1.67
RAB28-202ENST00000330852 APBA3O96018 575 aa25.49■■□□□ 1.67
RAB28-202ENST00000330852 DDB1Q16531 1140 aa25.49■■□□□ 1.67
RAB28-202ENST00000330852 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
RAB28-202ENST00000330852 SRCAPQ6ZRS2 3230 aa25.49■■□□□ 1.67
RAB28-202ENST00000330852 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 LRRC37A3O60309 1634 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 OVOS2A0A0G2JMS6 1433 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 OVOS2A0A0J9YW53 1432 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 OVOS2Q6IE36 1432 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 CSB-PGBD3P0DP91 1061 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 NME9Q86XW9 330 aa25.48■■□□□ 1.67
RAB28-202ENST00000330852 EZH2Q15910 746 aaKnown RBP25.47■■□□□ 1.67
RAB28-202ENST00000330852 PEAK1Q9H792 1746 aa25.47■■□□□ 1.67
RAB28-202ENST00000330852 LTN1O94822 1766 aa25.47■■□□□ 1.67
RAB28-202ENST00000330852 CLSPNQ9HAW4 1339 aa25.46■■□□□ 1.67
RAB28-202ENST00000330852 CCDC7Q96M83 1385 aa25.46■■□□□ 1.67
RAB28-202ENST00000330852 LRP5O75197 1615 aa25.46■■□□□ 1.67
RAB28-202ENST00000330852 SBF2Q86WG5 1849 aa25.46■■□□□ 1.67
RAB28-202ENST00000330852 RREB1Q92766 1687 aa25.43■■□□□ 1.66
RAB28-202ENST00000330852 BCL9O00512 1426 aa25.42■■□□□ 1.66
RAB28-202ENST00000330852 PSDA5PKW4 1024 aaPredicted RBP25.42■■□□□ 1.66
RAB28-202ENST00000330852 USP47Q96K76 1375 aa25.41■■□□□ 1.66
RAB28-202ENST00000330852 TMF1P82094 1093 aa25.41■■□□□ 1.66
RAB28-202ENST00000330852 RGPD3A6NKT7 1758 aaPredicted RBP25.4■■□□□ 1.66
RAB28-202ENST00000330852 RGPD4Q7Z3J3 1758 aa25.4■■□□□ 1.66
RAB28-202ENST00000330852 ERBB3P21860 1342 aa25.4■■□□□ 1.66
RAB28-202ENST00000330852 EXOC5O00471 708 aa25.39■■□□□ 1.65
RAB28-202ENST00000330852 CDCA8Q53HL2 280 aa25.39■■□□□ 1.65
RAB28-202ENST00000330852 R3HDM1Q15032 1099 aaKnown RBP25.38■■□□□ 1.65
RAB28-202ENST00000330852 ANKRD36BQ8N2N9 1353 aa25.38■■□□□ 1.65
RAB28-202ENST00000330852 NUP188Q5SRE5 1749 aa25.37■■□□□ 1.65
RAB28-202ENST00000330852 NBPF14Q5TI25 921 aa25.37■■□□□ 1.65
RAB28-202ENST00000330852 MARCH10Q8NA82 808 aaPredicted RBP25.37■■□□□ 1.65
RAB28-202ENST00000330852 BCL11BQ9C0K0 894 aaPredicted RBP25.37■■□□□ 1.65
RAB28-202ENST00000330852 PLSCR1O15162 318 aa25.36■■□□□ 1.65
RAB28-202ENST00000330852 COG3Q96JB2 828 aa25.36■■□□□ 1.65
RAB28-202ENST00000330852 NLRP2Q9NX02 1062 aa25.34■■□□□ 1.65
RAB28-202ENST00000330852 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
RAB28-202ENST00000330852 IP6K1Q92551 441 aa25.34■■□□□ 1.65
RAB28-202ENST00000330852 FAM208AQ9UK61 1670 aaKnown RBP25.33■■□□□ 1.65
RAB28-202ENST00000330852 TNS2Q63HR2 1409 aa25.33■■□□□ 1.65
RAB28-202ENST00000330852 IL2RBP14784 551 aa25.31■■□□□ 1.64
RAB28-202ENST00000330852 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
RAB28-202ENST00000330852 MAP3K19Q56UN5 1328 aa25.26■■□□□ 1.63
RAB28-202ENST00000330852 FYB1O15117 783 aa25.25■■□□□ 1.63
RAB28-202ENST00000330852 KAT6BQ8WYB5 2073 aa25.24■■□□□ 1.63
RAB28-202ENST00000330852 AMPHP49418 695 aa25.24■■□□□ 1.63
RAB28-202ENST00000330852 RTL1A6NKG5 1358 aa25.24■■□□□ 1.63
RAB28-202ENST00000330852 NHSQ6T4R5 1651 aa25.23■■□□□ 1.63
RAB28-202ENST00000330852 KIF20BQ96Q89 1820 aa25.23■■□□□ 1.63
RAB28-202ENST00000330852 HOXC9P31274 260 aa25.23■■□□□ 1.63
RAB28-202ENST00000330852 PTF1AQ7RTS3 328 aa25.22■■□□□ 1.63
RAB28-202ENST00000330852 MYOM1P52179 1685 aa25.19■■□□□ 1.62
RAB28-202ENST00000330852 LTV1Q96GA3 475 aaPredicted RBP25.19■■□□□ 1.62
RAB28-202ENST00000330852 GGNBP2Q9H3C7 697 aa25.19■■□□□ 1.62
RAB28-202ENST00000330852 PROM2Q8N271 834 aa25.17■■□□□ 1.62
RAB28-202ENST00000330852 KIF24Q5T7B8 1368 aa25.17■■□□□ 1.62
RAB28-202ENST00000330852 RGPD2P0DJD1 1756 aa25.16■■□□□ 1.62
RAB28-202ENST00000330852 TXNRD1Q16881 649 aa25.16■■□□□ 1.62
RAB28-202ENST00000330852 KCNQ2O43526 872 aa25.15■■□□□ 1.62
RAB28-202ENST00000330852 FBLN1P23142 703 aa25.15■■□□□ 1.62
RAB28-202ENST00000330852 RRS1Q15050 365 aaKnown RBP25.14■■□□□ 1.61
RAB28-202ENST00000330852 SPON1Q9HCB6 807 aa25.14■■□□□ 1.61
RAB28-202ENST00000330852 BTAF1O14981 1849 aa25.14■■□□□ 1.61
RAB28-202ENST00000330852 SMG6Q86US8 1419 aaKnown RBP25.14■■□□□ 1.61
RAB28-202ENST00000330852 CARD14Q9BXL6 1004 aa25.13■■□□□ 1.61
RAB28-202ENST00000330852 ACSBG1Q96GR2 724 aa25.12■■□□□ 1.61
RAB28-202ENST00000330852 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
RAB28-202ENST00000330852 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
RAB28-202ENST00000330852 ANO8Q9HCE9 1232 aaPredicted RBP25.12■■□□□ 1.61
RAB28-202ENST00000330852 INSRP06213 1382 aa25.11■■□□□ 1.61
RAB28-202ENST00000330852 FLT4P35916 1363 aa25.11■■□□□ 1.61
RAB28-202ENST00000330852 NSD3Q9BZ95 1437 aa25.1■■□□□ 1.61
RAB28-202ENST00000330852 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
RAB28-202ENST00000330852 STK32BQ9NY57 414 aa25.1■■□□□ 1.61
RAB28-202ENST00000330852 CASZ1Q86V15 1759 aa25.1■■□□□ 1.61
RAB28-202ENST00000330852 EIF4G2P78344 907 aaKnown RBP eCLIP25.09■■□□□ 1.61
RAB28-202ENST00000330852 ZCRB1Q8TBF4 217 aaKnown RBP25.09■■□□□ 1.61
RAB28-202ENST00000330852 SLC15A2Q16348 729 aa25.07■■□□□ 1.6
RAB28-202ENST00000330852 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
RAB28-202ENST00000330852 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
RAB28-202ENST00000330852 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
RAB28-202ENST00000330852 HSP90AB2PQ58FF8 381 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms