RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 DPYSL4O14531 572 aa9.48□□□□□ -0.89
SMG1-201ENST00000330588 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
SMG1-201ENST00000330588 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
SMG1-201ENST00000330588 EPAS1Q99814 870 aa9.48□□□□□ -0.89
SMG1-201ENST00000330588 NEXMIFQ5QGS0 1516 aa9.48□□□□□ -0.89
SMG1-201ENST00000330588 GOLGA8CPA6NN73 597 aa9.47□□□□□ -0.89
SMG1-201ENST00000330588 RPGRIP1LQ68CZ1 1315 aa9.46□□□□□ -0.89
SMG1-201ENST00000330588 NRXN3Q9Y4C0 1643 aa9.46□□□□□ -0.89
SMG1-201ENST00000330588 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.89
SMG1-201ENST00000330588 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.89
SMG1-201ENST00000330588 PRAG1Q86YV5 1406 aa9.46□□□□□ -0.9
SMG1-201ENST00000330588 XRN1Q8IZH2 1706 aaKnown RBP9.45□□□□□ -0.9
SMG1-201ENST00000330588 FAM135BQ49AJ0 1406 aa9.45□□□□□ -0.9
SMG1-201ENST00000330588 SETD5Q9C0A6 1442 aa9.45□□□□□ -0.9
SMG1-201ENST00000330588 TMEM94Q12767 1356 aa9.44□□□□□ -0.9
SMG1-201ENST00000330588 HRCP23327 699 aa9.44□□□□□ -0.9
SMG1-201ENST00000330588 C6orf132Q5T0Z8 1188 aa9.44□□□□□ -0.9
SMG1-201ENST00000330588 LAPTM4BQ86VI4 370 aa9.44□□□□□ -0.9
SMG1-201ENST00000330588 SLC26A8Q96RN1 970 aa9.44□□□□□ -0.9
SMG1-201ENST00000330588 DCCP43146 1447 aa9.44□□□□□ -0.9
SMG1-201ENST00000330588 PPLO60437 1756 aa9.43□□□□□ -0.9
SMG1-201ENST00000330588 TRIM52Q96A61 297 aa9.43□□□□□ -0.9
SMG1-201ENST00000330588 MSH6P52701 1360 aa9.43□□□□□ -0.9
SMG1-201ENST00000330588 PROSER2Q86WR7 435 aaPredicted RBP9.42□□□□□ -0.9
SMG1-201ENST00000330588 SETD1AO15047 1707 aaKnown RBP9.42□□□□□ -0.9
SMG1-201ENST00000330588 CCDC144AA2RUR9 1427 aa9.42□□□□□ -0.9
SMG1-201ENST00000330588 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
SMG1-201ENST00000330588 RGS20O76081 388 aa9.41□□□□□ -0.9
SMG1-201ENST00000330588 PDIA6Q15084 440 aa9.41□□□□□ -0.9
SMG1-201ENST00000330588 BCANQ96GW7 911 aa9.41□□□□□ -0.9
SMG1-201ENST00000330588 IFT172Q9UG01 1749 aa9.41□□□□□ -0.9
SMG1-201ENST00000330588 ANKRD30BQ9BXX2 1392 aa9.41□□□□□ -0.9
SMG1-201ENST00000330588 SPATA31E1Q6ZUB1 1445 aa9.4□□□□□ -0.9
SMG1-201ENST00000330588 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
SMG1-201ENST00000330588 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
SMG1-201ENST00000330588 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
SMG1-201ENST00000330588 PTPRUQ92729 1446 aa9.39□□□□□ -0.91
SMG1-201ENST00000330588 HSPA1LP34931 641 aa9.39□□□□□ -0.91
SMG1-201ENST00000330588 ZNF326Q5BKZ1 582 aaKnown RBP9.39□□□□□ -0.91
SMG1-201ENST00000330588 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.39□□□□□ -0.91
SMG1-201ENST00000330588 ROBO1Q9Y6N7 1651 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 RAB3GAP2Q9H2M9 1393 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 A0A0G2JS52 829 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 SOWAHBA6NEL2 793 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 PIP4K2BP78356 416 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 DDX12PQ92771 950 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 C19orf44Q9H6X5 657 aa9.38□□□□□ -0.91
SMG1-201ENST00000330588 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
SMG1-201ENST00000330588 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
SMG1-201ENST00000330588 ZFRQ96KR1 1074 aaKnown RBP9.37□□□□□ -0.91
SMG1-201ENST00000330588 AMOTL2Q9Y2J4 779 aa9.37□□□□□ -0.91
SMG1-201ENST00000330588 MYOM2P54296 1465 aa9.37□□□□□ -0.91
SMG1-201ENST00000330588 LAMC1P11047 1609 aa9.37□□□□□ -0.91
SMG1-201ENST00000330588 METP08581 1390 aa9.37□□□□□ -0.91
SMG1-201ENST00000330588 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
SMG1-201ENST00000330588 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
SMG1-201ENST00000330588 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
SMG1-201ENST00000330588 NRXN1Q9ULB1 1477 aa9.36□□□□□ -0.91
SMG1-201ENST00000330588 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
SMG1-201ENST00000330588 DISP3Q9P2K9 1392 aa9.36□□□□□ -0.91
SMG1-201ENST00000330588 TECPR2O15040 1411 aa9.36□□□□□ -0.91
SMG1-201ENST00000330588 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
SMG1-201ENST00000330588 BCAMP50895 628 aa9.36□□□□□ -0.91
SMG1-201ENST00000330588 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
SMG1-201ENST00000330588 KNDC1Q76NI1 1749 aa9.35□□□□□ -0.91
SMG1-201ENST00000330588 PIK3C2GO75747 1445 aa9.35□□□□□ -0.91
SMG1-201ENST00000330588 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
SMG1-201ENST00000330588 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
SMG1-201ENST00000330588 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
SMG1-201ENST00000330588 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.91
SMG1-201ENST00000330588 PHLPP1O60346 1717 aa9.33□□□□□ -0.92
SMG1-201ENST00000330588 NBR1Q14596 966 aa9.33□□□□□ -0.92
SMG1-201ENST00000330588 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
SMG1-201ENST00000330588 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
SMG1-201ENST00000330588 COL16A1Q07092 1604 aaPredicted RBP9.33□□□□□ -0.92
SMG1-201ENST00000330588 ATF3P18847 181 aa9.33□□□□□ -0.92
SMG1-201ENST00000330588 E2F4Q16254 413 aa9.33□□□□□ -0.92
SMG1-201ENST00000330588 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
SMG1-201ENST00000330588 MST1RQ04912 1400 aa9.32□□□□□ -0.92
SMG1-201ENST00000330588 CDC42BPGQ6DT37 1551 aa9.32□□□□□ -0.92
SMG1-201ENST00000330588 NHSL1Q5SYE7 1610 aa9.32□□□□□ -0.92
SMG1-201ENST00000330588 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
SMG1-201ENST00000330588 ABCC11Q96J66 1382 aa9.32□□□□□ -0.92
SMG1-201ENST00000330588 SHPRHQ149N8 1683 aa9.31□□□□□ -0.92
SMG1-201ENST00000330588 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
SMG1-201ENST00000330588 WBP1LQ9NX94 342 aa9.31□□□□□ -0.92
SMG1-201ENST00000330588 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
SMG1-201ENST00000330588 JCADQ9P266 1359 aa9.31□□□□□ -0.92
SMG1-201ENST00000330588 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
SMG1-201ENST00000330588 MAP3K7O43318 606 aa9.3□□□□□ -0.92
SMG1-201ENST00000330588 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
SMG1-201ENST00000330588 C14orf37Q86TY3 774 aa9.3□□□□□ -0.92
SMG1-201ENST00000330588 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
SMG1-201ENST00000330588 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
SMG1-201ENST00000330588 DLC1Q96QB1 1528 aa9.29□□□□□ -0.92
SMG1-201ENST00000330588 SPATA31A6Q5VVP1 1343 aa9.29□□□□□ -0.92
SMG1-201ENST00000330588 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
SMG1-201ENST00000330588 BRINP3Q76B58 766 aa9.28□□□□□ -0.92
SMG1-201ENST00000330588 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms