RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 CEP152O94986 1710 aa18.67■□□□□ 0.58
RGPD6-202ENST00000330331 VGLL3A8MV65 326 aa18.67■□□□□ 0.58
RGPD6-202ENST00000330331 BMP2KLQ5H9B9 411 aa18.67■□□□□ 0.58
RGPD6-202ENST00000330331 ANKRD45Q5TZF3 282 aa18.66■□□□□ 0.58
RGPD6-202ENST00000330331 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
RGPD6-202ENST00000330331 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
RGPD6-202ENST00000330331 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
RGPD6-202ENST00000330331 CYP2E1P05181 493 aaPredicted RBP18.65■□□□□ 0.58
RGPD6-202ENST00000330331 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
RGPD6-202ENST00000330331 GGT6Q6P531 493 aa18.65■□□□□ 0.58
RGPD6-202ENST00000330331 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
RGPD6-202ENST00000330331 ZBTB22O15209 634 aa18.64■□□□□ 0.58
RGPD6-202ENST00000330331 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
RGPD6-202ENST00000330331 ATF7IPQ6VMQ6 1270 aa18.64■□□□□ 0.57
RGPD6-202ENST00000330331 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.57
RGPD6-202ENST00000330331 POLR3AO14802 1390 aaPredicted RBP18.64■□□□□ 0.57
RGPD6-202ENST00000330331 ZGPATQ8N5A5 531 aaKnown RBP18.64■□□□□ 0.57
RGPD6-202ENST00000330331 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.57
RGPD6-202ENST00000330331 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
RGPD6-202ENST00000330331 KIF3AQ9Y496 699 aa18.63■□□□□ 0.57
RGPD6-202ENST00000330331 NOLC1Q14978 699 aaKnown RBP eCLIP18.63■□□□□ 0.57
RGPD6-202ENST00000330331 CGNQ9P2M7 1197 aaKnown RBP18.63■□□□□ 0.57
RGPD6-202ENST00000330331 EFCAB6Q5THR3 1501 aa18.63■□□□□ 0.57
RGPD6-202ENST00000330331 LMTK2Q8IWU2 1503 aa18.62■□□□□ 0.57
RGPD6-202ENST00000330331 TRPM2O94759 1503 aa18.62■□□□□ 0.57
RGPD6-202ENST00000330331 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
RGPD6-202ENST00000330331 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
RGPD6-202ENST00000330331 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.57
RGPD6-202ENST00000330331 MORC1Q86VD1 984 aa18.61■□□□□ 0.57
RGPD6-202ENST00000330331 PTPRTO14522 1441 aa18.61■□□□□ 0.57
RGPD6-202ENST00000330331 TTC12Q9H892 705 aaPredicted RBP18.61■□□□□ 0.57
RGPD6-202ENST00000330331 ZDHHC9Q9Y397 364 aa18.61■□□□□ 0.57
RGPD6-202ENST00000330331 GTF2F1P35269 517 aaKnown RBP eCLIP18.6■□□□□ 0.57
RGPD6-202ENST00000330331 MYOM1P52179 1685 aa18.6■□□□□ 0.57
RGPD6-202ENST00000330331 PDIA4P13667 645 aaKnown RBP18.6■□□□□ 0.57
RGPD6-202ENST00000330331 PIBF1Q8WXW3 757 aa18.59■□□□□ 0.57
RGPD6-202ENST00000330331 ZNF771Q7L3S4 317 aaPredicted RBP18.59■□□□□ 0.57
RGPD6-202ENST00000330331 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.57
RGPD6-202ENST00000330331 CFAP65Q6ZU64 1925 aaKnown RBP18.58■□□□□ 0.57
RGPD6-202ENST00000330331 RABEP1Q15276 862 aa18.58■□□□□ 0.57
RGPD6-202ENST00000330331 TSPY26PQ9H489 355 aa18.58■□□□□ 0.57
RGPD6-202ENST00000330331 C1orf115Q9H7X2 142 aa18.58■□□□□ 0.57
RGPD6-202ENST00000330331 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
RGPD6-202ENST00000330331 ABCC3O15438 1527 aa18.57■□□□□ 0.56
RGPD6-202ENST00000330331 CCDC27Q2M243 656 aa18.57■□□□□ 0.56
RGPD6-202ENST00000330331 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
RGPD6-202ENST00000330331 PLCD3Q8N3E9 789 aa18.56■□□□□ 0.56
RGPD6-202ENST00000330331 CDC45O75419 566 aa18.55■□□□□ 0.56
RGPD6-202ENST00000330331 MTHFSP49914 203 aa18.55■□□□□ 0.56
RGPD6-202ENST00000330331 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
RGPD6-202ENST00000330331 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
RGPD6-202ENST00000330331 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
RGPD6-202ENST00000330331 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
RGPD6-202ENST00000330331 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
RGPD6-202ENST00000330331 USP25Q9UHP3 1055 aa18.54■□□□□ 0.56
RGPD6-202ENST00000330331 NPATQ14207 1427 aa18.54■□□□□ 0.56
RGPD6-202ENST00000330331 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
RGPD6-202ENST00000330331 IPO4Q8TEX9 1081 aaKnown RBP18.54■□□□□ 0.56
RGPD6-202ENST00000330331 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
RGPD6-202ENST00000330331 FOXD4L6Q3SYB3 417 aaPredicted RBP18.53■□□□□ 0.56
RGPD6-202ENST00000330331 FOXD4L3Q6VB84 417 aaPredicted RBP18.53■□□□□ 0.56
RGPD6-202ENST00000330331 SHPRHQ149N8 1683 aa18.52■□□□□ 0.56
RGPD6-202ENST00000330331 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
RGPD6-202ENST00000330331 UGGT1Q9NYU2 1555 aa18.52■□□□□ 0.56
RGPD6-202ENST00000330331 RIOK3O14730 519 aaKnown RBP18.52■□□□□ 0.55
RGPD6-202ENST00000330331 FKBP5Q13451 457 aaPredicted RBP18.52■□□□□ 0.55
RGPD6-202ENST00000330331 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.55
RGPD6-202ENST00000330331 SIGLEC1Q9BZZ2 1709 aa18.52■□□□□ 0.55
RGPD6-202ENST00000330331 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.55
RGPD6-202ENST00000330331 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
RGPD6-202ENST00000330331 MBD3O95983 291 aa18.51■□□□□ 0.55
RGPD6-202ENST00000330331 GSPT1P15170 499 aaKnown RBP18.5■□□□□ 0.55
RGPD6-202ENST00000330331 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
RGPD6-202ENST00000330331 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
RGPD6-202ENST00000330331 TAF3Q5VWG9 929 aa18.5■□□□□ 0.55
RGPD6-202ENST00000330331 KIF1BO60333 1816 aa18.5■□□□□ 0.55
RGPD6-202ENST00000330331 ADCY5O95622 1261 aa18.5■□□□□ 0.55
RGPD6-202ENST00000330331 CDK11BP21127 795 aaKnown RBP18.5■□□□□ 0.55
RGPD6-202ENST00000330331 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
RGPD6-202ENST00000330331 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
RGPD6-202ENST00000330331 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
RGPD6-202ENST00000330331 AGLP35573 1532 aa18.49■□□□□ 0.55
RGPD6-202ENST00000330331 PLCB2Q00722 1185 aa18.48■□□□□ 0.55
RGPD6-202ENST00000330331 GCC1Q96CN9 775 aa18.48■□□□□ 0.55
RGPD6-202ENST00000330331 IPO8O15397 1037 aaKnown RBP18.48■□□□□ 0.55
RGPD6-202ENST00000330331 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
RGPD6-202ENST00000330331 GDPD2Q9HCC8 539 aa18.48■□□□□ 0.55
RGPD6-202ENST00000330331 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
RGPD6-202ENST00000330331 ST18O60284 1047 aa18.47■□□□□ 0.55
RGPD6-202ENST00000330331 ANKRD7Q92527 254 aa18.47■□□□□ 0.55
RGPD6-202ENST00000330331 SPTLC3Q9NUV7 552 aa18.47■□□□□ 0.55
RGPD6-202ENST00000330331 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
RGPD6-202ENST00000330331 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
RGPD6-202ENST00000330331 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
RGPD6-202ENST00000330331 KCNJ4P48050 445 aa18.46■□□□□ 0.55
RGPD6-202ENST00000330331 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
RGPD6-202ENST00000330331 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
RGPD6-202ENST00000330331 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
RGPD6-202ENST00000330331 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
RGPD6-202ENST00000330331 CHAF1AQ13111 956 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms