RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ATP10DQ9P241 1426 aa22.21■■□□□ 1.15
CTHRC1-201ENST00000330295 ITSN1Q15811 1721 aa22.2■■□□□ 1.14
CTHRC1-201ENST00000330295 KLHL34Q8N239 644 aa22.2■■□□□ 1.14
CTHRC1-201ENST00000330295 MARCH10Q8NA82 808 aaPredicted RBP22.19■■□□□ 1.14
CTHRC1-201ENST00000330295 AKAP12Q02952 1782 aa22.19■■□□□ 1.14
CTHRC1-201ENST00000330295 GPBP1L1Q9HC44 474 aaPredicted RBP22.17■■□□□ 1.14
CTHRC1-201ENST00000330295 USP19O94966 1318 aa22.15■■□□□ 1.14
CTHRC1-201ENST00000330295 GRIN3BO60391 1043 aa22.15■■□□□ 1.14
CTHRC1-201ENST00000330295 PAPPAQ13219 1627 aa22.15■■□□□ 1.14
CTHRC1-201ENST00000330295 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
CTHRC1-201ENST00000330295 TOPAZ1Q8N9V7 1692 aa22.14■■□□□ 1.13
CTHRC1-201ENST00000330295 NLGN2Q8NFZ4 835 aa22.13■■□□□ 1.13
CTHRC1-201ENST00000330295 TRAK1Q9UPV9 953 aa22.13■■□□□ 1.13
CTHRC1-201ENST00000330295 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
CTHRC1-201ENST00000330295 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
CTHRC1-201ENST00000330295 POLD1P28340 1107 aa22.11■■□□□ 1.13
CTHRC1-201ENST00000330295 NUDT16Q96DE0 195 aaKnown RBP22.11■■□□□ 1.13
CTHRC1-201ENST00000330295 ADGRB1O14514 1584 aa22.11■■□□□ 1.13
CTHRC1-201ENST00000330295 GCP02774 474 aa22.1■■□□□ 1.13
CTHRC1-201ENST00000330295 COL24A1Q17RW2 1714 aa22.1■■□□□ 1.13
CTHRC1-201ENST00000330295 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
CTHRC1-201ENST00000330295 TOM1L2Q6ZVM7 507 aa22.09■■□□□ 1.13
CTHRC1-201ENST00000330295 CDCA7Q9BWT1 371 aaPredicted RBP22.09■■□□□ 1.13
CTHRC1-201ENST00000330295 ZNF827Q17R98 1081 aa22.08■■□□□ 1.13
CTHRC1-201ENST00000330295 SLC16A10Q8TF71 515 aa22.08■■□□□ 1.13
CTHRC1-201ENST00000330295 CAPN15O75808 1086 aa22.07■■□□□ 1.12
CTHRC1-201ENST00000330295 ACEP12821 1306 aa22.06■■□□□ 1.12
CTHRC1-201ENST00000330295 NLRP13Q86W25 1043 aa22.06■■□□□ 1.12
CTHRC1-201ENST00000330295 NHSQ6T4R5 1651 aa22.05■■□□□ 1.12
CTHRC1-201ENST00000330295 ADCY9O60503 1353 aa22.05■■□□□ 1.12
CTHRC1-201ENST00000330295 ZNF526Q8TF50 670 aaPredicted RBP22.05■■□□□ 1.12
CTHRC1-201ENST00000330295 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
CTHRC1-201ENST00000330295 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
CTHRC1-201ENST00000330295 APLP1P51693 650 aa22.03■■□□□ 1.12
CTHRC1-201ENST00000330295 COL13A1Q5TAT6 717 aaPredicted RBP22.02■■□□□ 1.12
CTHRC1-201ENST00000330295 WDR17Q8IZU2 1322 aa22.02■■□□□ 1.12
CTHRC1-201ENST00000330295 DNAJC5GQ8N7S2 189 aa22.01■■□□□ 1.11
CTHRC1-201ENST00000330295 EXOC5O00471 708 aa22■■□□□ 1.11
CTHRC1-201ENST00000330295 AKT1S1Q96B36 256 aa21.99■■□□□ 1.11
CTHRC1-201ENST00000330295 COL18A1P39060 1754 aa21.99■■□□□ 1.11
CTHRC1-201ENST00000330295 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
CTHRC1-201ENST00000330295 PRELPP51888 382 aa21.98■■□□□ 1.11
CTHRC1-201ENST00000330295 LRRC4BQ9NT99 713 aa21.98■■□□□ 1.11
CTHRC1-201ENST00000330295 CCDC61Q9Y6R9 512 aa21.98■■□□□ 1.11
CTHRC1-201ENST00000330295 BTAF1O14981 1849 aa21.97■■□□□ 1.11
CTHRC1-201ENST00000330295 ACSBG1Q96GR2 724 aa21.97■■□□□ 1.11
CTHRC1-201ENST00000330295 PNPLA7Q6ZV29 1317 aa21.97■■□□□ 1.11
CTHRC1-201ENST00000330295 BRD4O60885 1362 aaPredicted RBP21.97■■□□□ 1.11
CTHRC1-201ENST00000330295 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
CTHRC1-201ENST00000330295 KIF3CO14782 793 aa21.96■■□□□ 1.11
CTHRC1-201ENST00000330295 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
CTHRC1-201ENST00000330295 TNS2Q63HR2 1409 aa21.96■■□□□ 1.11
CTHRC1-201ENST00000330295 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
CTHRC1-201ENST00000330295 CARD10Q9BWT7 1032 aa21.95■■□□□ 1.1
CTHRC1-201ENST00000330295 AXIN2Q9Y2T1 843 aa21.95■■□□□ 1.1
CTHRC1-201ENST00000330295 USP6P35125 1406 aa21.95■■□□□ 1.1
CTHRC1-201ENST00000330295 SLIT3O75094 1523 aa21.94■■□□□ 1.1
CTHRC1-201ENST00000330295 TNS4Q8IZW8 715 aa21.93■■□□□ 1.1
CTHRC1-201ENST00000330295 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
CTHRC1-201ENST00000330295 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
CTHRC1-201ENST00000330295 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
CTHRC1-201ENST00000330295 ABCC6O95255 1503 aa21.9■■□□□ 1.1
CTHRC1-201ENST00000330295 SLC34A2O95436 690 aa21.89■■□□□ 1.09
CTHRC1-201ENST00000330295 CSB-PGBD3P0DP91 1061 aa21.89■■□□□ 1.09
CTHRC1-201ENST00000330295 NLRP6P59044 892 aa21.89■■□□□ 1.09
CTHRC1-201ENST00000330295 RGPD5Q99666 1765 aa21.89■■□□□ 1.09
CTHRC1-201ENST00000330295 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
CTHRC1-201ENST00000330295 KAT6BQ8WYB5 2073 aa21.88■■□□□ 1.09
CTHRC1-201ENST00000330295 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
CTHRC1-201ENST00000330295 CPSF1Q10570 1443 aaKnown RBP21.88■■□□□ 1.09
CTHRC1-201ENST00000330295 CCDC7Q96M83 1385 aa21.87■■□□□ 1.09
CTHRC1-201ENST00000330295 PPIP5K1Q6PFW1 1433 aa21.86■■□□□ 1.09
CTHRC1-201ENST00000330295 WDR90Q96KV7 1748 aa21.85■■□□□ 1.09
CTHRC1-201ENST00000330295 TOMM70O94826 608 aa21.83■■□□□ 1.09
CTHRC1-201ENST00000330295 JMYQ8N9B5 988 aa21.83■■□□□ 1.09
CTHRC1-201ENST00000330295 CD2APQ9Y5K6 639 aa21.83■■□□□ 1.09
CTHRC1-201ENST00000330295 ARHGEF25Q86VW2 580 aa21.82■■□□□ 1.08
CTHRC1-201ENST00000330295 KLRG1Q96E93 195 aa21.82■■□□□ 1.08
CTHRC1-201ENST00000330295 PIK3C2AO00443 1686 aa21.8■■□□□ 1.08
CTHRC1-201ENST00000330295 KCNQ4P56696 695 aa21.79■■□□□ 1.08
CTHRC1-201ENST00000330295 KDM2AQ9Y2K7 1162 aa21.78■■□□□ 1.08
CTHRC1-201ENST00000330295 MSL1Q68DK7 614 aa21.77■■□□□ 1.08
CTHRC1-201ENST00000330295 COL23A1Q86Y22 540 aaPredicted RBP21.76■■□□□ 1.07
CTHRC1-201ENST00000330295 HTRA3P83110 453 aa21.74■■□□□ 1.07
CTHRC1-201ENST00000330295 KCNH5Q8NCM2 988 aa21.74■■□□□ 1.07
CTHRC1-201ENST00000330295 LY75O60449 1722 aa21.73■■□□□ 1.07
CTHRC1-201ENST00000330295 IL2RBP14784 551 aa21.73■■□□□ 1.07
CTHRC1-201ENST00000330295 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
CTHRC1-201ENST00000330295 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
CTHRC1-201ENST00000330295 SOX12O15370 315 aa21.72■■□□□ 1.07
CTHRC1-201ENST00000330295 WWC3Q9ULE0 1092 aa21.71■■□□□ 1.07
CTHRC1-201ENST00000330295 QRICH2Q9H0J4 1663 aa21.71■■□□□ 1.07
CTHRC1-201ENST00000330295 IGSF1Q8N6C5 1336 aa21.71■■□□□ 1.07
CTHRC1-201ENST00000330295 PCNTO95613 3336 aa21.7■■□□□ 1.06
CTHRC1-201ENST00000330295 CABP2Q9NPB3 220 aa21.69■■□□□ 1.06
CTHRC1-201ENST00000330295 NFAT5O94916 1531 aa21.69■■□□□ 1.06
CTHRC1-201ENST00000330295 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
CTHRC1-201ENST00000330295 RBM46Q8TBY0 533 aaKnown RBP21.68■■□□□ 1.06
CTHRC1-201ENST00000330295 NLRP2Q9NX02 1062 aa21.68■■□□□ 1.06
CTHRC1-201ENST00000330295 CABP1Q9NZU7 370 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms