RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 ABCC10Q5T3U5 1492 aa8.85□□□□□ -0.99
PSEN1-201ENST00000324501 REC8O95072 547 aa8.85□□□□□ -0.99
PSEN1-201ENST00000324501 HSP90AB4PQ58FF6 505 aa8.85□□□□□ -0.99
PSEN1-201ENST00000324501 ZKSCAN1P17029 563 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-201ENST00000324501 TTC39AQ5SRH9 613 aa8.84□□□□□ -0.99
PSEN1-201ENST00000324501 FAM83GA6ND36 823 aa8.84□□□□□ -0.99
PSEN1-201ENST00000324501 GNAI3P08754 354 aa8.84□□□□□ -0.99
PSEN1-201ENST00000324501 MSNP26038 577 aaKnown RBP8.84□□□□□ -0.99
PSEN1-201ENST00000324501 SLFN5Q08AF3 891 aa8.84□□□□□ -0.99
PSEN1-201ENST00000324501 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
PSEN1-201ENST00000324501 DUSP27Q5VZP5 1158 aa8.84□□□□□ -0.99
PSEN1-201ENST00000324501 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -1
PSEN1-201ENST00000324501 UBAP1LF5GYI3 381 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 SKAP1Q86WV1 359 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 NEO1Q92859 1461 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 CNTROBQ8N137 903 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 SYAP1Q96A49 352 aaPredicted RBP8.83□□□□□ -1
PSEN1-201ENST00000324501 C22orf23Q9BZE7 217 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 CDC45O75419 566 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 ATF7IPQ6VMQ6 1270 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 SRCIN1Q9C0H9 1055 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 TMEM57Q8N5G2 664 aa8.83□□□□□ -1
PSEN1-201ENST00000324501 UHRF1BP1LA0JNW5 1464 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 CABLES1Q8TDN4 633 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 TMOD3Q9NYL9 352 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 PTMSP20962 102 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 TRDNQ13061 729 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 MVPQ14764 893 aaKnown RBP8.82□□□□□ -1
PSEN1-201ENST00000324501 C20orf194Q5TEA3 1177 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 TARBP1Q13395 1621 aaKnown RBP8.82□□□□□ -1
PSEN1-201ENST00000324501 CCT4P50991 539 aaKnown RBP8.82□□□□□ -1
PSEN1-201ENST00000324501 CLASRPQ8N2M8 674 aaKnown RBP8.82□□□□□ -1
PSEN1-201ENST00000324501 NINLQ9Y2I6 1382 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 GOLGA6L3A6NEY3 463 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 CSPP1Q1MSJ5 1256 aa8.82□□□□□ -1
PSEN1-201ENST00000324501 F6X3S4 739 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 NRDCO43847 1150 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 CPLX1O14810 134 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 IL1RAPL2Q9NP60 686 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 NGLY1Q96IV0 654 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 CTDP1Q9Y5B0 961 aaPredicted RBP8.81□□□□□ -1
PSEN1-201ENST00000324501 VPS37CA5D8V6 355 aaPredicted RBP8.81□□□□□ -1
PSEN1-201ENST00000324501 RNF20Q5VTR2 975 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 ZMYM3Q14202 1370 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 ERICH2A1L162 156 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 SMARCA5O60264 1052 aaPredicted RBP8.81□□□□□ -1
PSEN1-201ENST00000324501 MYD88Q99836 296 aa8.81□□□□□ -1
PSEN1-201ENST00000324501 RRP12Q5JTH9 1297 aaKnown RBP8.8□□□□□ -1
PSEN1-201ENST00000324501 ANKRD24Q8TF21 1146 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 PRAG1Q86YV5 1406 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 DNMT1P26358 1616 aaKnown RBP8.8□□□□□ -1
PSEN1-201ENST00000324501 SRGAP3O43295 1099 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 TRIM29Q14134 588 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 AACSQ86V21 672 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 LRRCC1Q9C099 1032 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 PDE4CQ08493 712 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 PDE3AQ14432 1141 aa8.8□□□□□ -1
PSEN1-201ENST00000324501 PES1O00541 588 aaKnown RBP8.79□□□□□ -1
PSEN1-201ENST00000324501 KIF3AQ9Y496 699 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 DDX49Q9Y6V7 483 aaKnown RBP8.79□□□□□ -1
PSEN1-201ENST00000324501 TPM4P67936 248 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 FKBP4Q02790 459 aaKnown RBP eCLIP8.79□□□□□ -1
PSEN1-201ENST00000324501 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
PSEN1-201ENST00000324501 CCDC57Q2TAC2 916 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 CHMP4CQ96CF2 233 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 MAGI3Q5TCQ9 1506 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 HSP90AB2PQ58FF8 381 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 CCDC158Q5M9N0 1113 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 JARID2Q92833 1246 aaPredicted RBP8.79□□□□□ -1
PSEN1-201ENST00000324501 SSH1Q8WYL5 1049 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 IFT57Q9NWB7 429 aa8.79□□□□□ -1
PSEN1-201ENST00000324501 RALGAPBQ86X10 1494 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 RALYLQ86SE5 291 aaKnown RBP8.78□□□□□ -1
PSEN1-201ENST00000324501 TBC1D2BQ9UPU7 963 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 SMC3Q9UQE7 1217 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 ATP10AO60312 1499 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 ATP7AQ04656 1500 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 PHF14O94880 888 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 LRRC59Q96AG4 307 aaKnown RBP8.78□□□□□ -1
PSEN1-201ENST00000324501 GCC1Q96CN9 775 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 ARID3AQ99856 593 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 SAMD9Q5K651 1589 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 ACSBG1Q96GR2 724 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 MPHOSPH8Q99549 860 aa8.78□□□□□ -1
PSEN1-201ENST00000324501 DDX11L8A8MPP1 907 aa8.77□□□□□ -1
PSEN1-201ENST00000324501 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1
PSEN1-201ENST00000324501 STARD3NLO95772 234 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 CHD1LQ86WJ1 897 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 ERC1Q8IUD2 1116 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 CHAF1AQ13111 956 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-201ENST00000324501 STK3Q13188 491 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 TTC21BQ7Z4L5 1316 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 MAST1Q9Y2H9 1570 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 RARSP54136 660 aaKnown RBP8.77□□□□□ -1.01
PSEN1-201ENST00000324501 CHD1O14646 1710 aa8.77□□□□□ -1.01
PSEN1-201ENST00000324501 ANXA1P04083 346 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms