RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 USP54Q70EL1 1684 aa32.3■■■□□ 2.76
TNFSF12-202ENST00000322272 ONECUT3O60422 494 aaPredicted RBP32.29■■■□□ 2.76
TNFSF12-202ENST00000322272 LARP1Q6PKG0 1096 aaKnown RBP32.29■■■□□ 2.76
TNFSF12-202ENST00000322272 SPATA31A1Q5TZJ5 1347 aa32.28■■■□□ 2.76
TNFSF12-202ENST00000322272 A0A0G2JS52 829 aa32.28■■■□□ 2.76
TNFSF12-202ENST00000322272 MYT1Q01538 1121 aa32.28■■■□□ 2.76
TNFSF12-202ENST00000322272 COG3Q96JB2 828 aa32.28■■■□□ 2.76
TNFSF12-202ENST00000322272 CCER2I3L3R5 266 aa32.27■■■□□ 2.76
TNFSF12-202ENST00000322272 PANK3Q9H999 370 aa32.27■■■□□ 2.76
TNFSF12-202ENST00000322272 USP35Q9P2H5 1018 aa32.27■■■□□ 2.76
TNFSF12-202ENST00000322272 AXIN2Q9Y2T1 843 aa32.27■■■□□ 2.76
TNFSF12-202ENST00000322272 COL5A2P05997 1499 aaPredicted RBP32.27■■■□□ 2.76
TNFSF12-202ENST00000322272 CARD14Q9BXL6 1004 aa32.26■■■□□ 2.76
TNFSF12-202ENST00000322272 UPF1Q92900 1129 aaKnown RBP eCLIP32.25■■■□□ 2.75
TNFSF12-202ENST00000322272 PRKRIP1Q9H875 184 aaPredicted RBP32.25■■■□□ 2.75
TNFSF12-202ENST00000322272 FYB1O15117 783 aa32.24■■■□□ 2.75
TNFSF12-202ENST00000322272 GGNBP2Q9H3C7 697 aa32.23■■■□□ 2.75
TNFSF12-202ENST00000322272 NSD3Q9BZ95 1437 aa32.22■■■□□ 2.75
TNFSF12-202ENST00000322272 COL18A1P39060 1754 aa32.22■■■□□ 2.75
TNFSF12-202ENST00000322272 PER1O15534 1290 aaPredicted RBP32.18■■■□□ 2.74
TNFSF12-202ENST00000322272 TCP11L2Q8N4U5 519 aa32.18■■■□□ 2.74
TNFSF12-202ENST00000322272 CRB1P82279 1406 aa32.17■■■□□ 2.74
TNFSF12-202ENST00000322272 TOM1L2Q6ZVM7 507 aa32.17■■■□□ 2.74
TNFSF12-202ENST00000322272 WDR17Q8IZU2 1322 aa32.16■■■□□ 2.74
TNFSF12-202ENST00000322272 KRT27Q7Z3Y8 459 aa32.16■■■□□ 2.74
TNFSF12-202ENST00000322272 KNSTRNQ9Y448 316 aa32.16■■■□□ 2.74
TNFSF12-202ENST00000322272 EP400Q96L91 3159 aa32.15■■■□□ 2.74
TNFSF12-202ENST00000322272 CSB-PGBD3P0DP91 1061 aa32.15■■■□□ 2.74
TNFSF12-202ENST00000322272 ABCC6O95255 1503 aa32.15■■■□□ 2.74
TNFSF12-202ENST00000322272 FBLN1P23142 703 aa32.15■■■□□ 2.74
TNFSF12-202ENST00000322272 BARGINQ6ZT62 677 aa32.15■■■□□ 2.74
TNFSF12-202ENST00000322272 BRWD3Q6RI45 1802 aa32.14■■■□□ 2.74
TNFSF12-202ENST00000322272 THRAP3Q9Y2W1 955 aaKnown RBP32.13■■■□□ 2.73
TNFSF12-202ENST00000322272 THSD7AQ9UPZ6 1657 aa32.12■■■□□ 2.73
TNFSF12-202ENST00000322272 LTN1O94822 1766 aa32.12■■■□□ 2.73
TNFSF12-202ENST00000322272 CGNL1Q0VF96 1302 aa32.11■■■□□ 2.73
TNFSF12-202ENST00000322272 RGPD5Q99666 1765 aa32.11■■■□□ 2.73
TNFSF12-202ENST00000322272 KIF20BQ96Q89 1820 aa32.11■■■□□ 2.73
TNFSF12-202ENST00000322272 MAP3K19Q56UN5 1328 aa32.1■■■□□ 2.73
TNFSF12-202ENST00000322272 RALBP1Q15311 655 aa32.1■■■□□ 2.73
TNFSF12-202ENST00000322272 PARD3Q8TEW0 1356 aa32.08■■■□□ 2.73
TNFSF12-202ENST00000322272 IP6K1Q92551 441 aa32.08■■■□□ 2.73
TNFSF12-202ENST00000322272 ERBB3P21860 1342 aa32.07■■■□□ 2.72
TNFSF12-202ENST00000322272 NPC1L1Q9UHC9 1359 aa32.07■■■□□ 2.72
TNFSF12-202ENST00000322272 RRS1Q15050 365 aaKnown RBP32.07■■■□□ 2.72
TNFSF12-202ENST00000322272 AMPHP49418 695 aa32.06■■■□□ 2.72
TNFSF12-202ENST00000322272 ANKRD24Q8TF21 1146 aa32.06■■■□□ 2.72
TNFSF12-202ENST00000322272 CARD10Q9BWT7 1032 aa32.05■■■□□ 2.72
TNFSF12-202ENST00000322272 BLMP54132 1417 aaPredicted RBP32.05■■■□□ 2.72
TNFSF12-202ENST00000322272 FAM182BQ5T319 152 aa32.04■■■□□ 2.72
TNFSF12-202ENST00000322272 HOXC9P31274 260 aa32.03■■■□□ 2.72
TNFSF12-202ENST00000322272 CNGB1Q14028 1251 aaPredicted RBP32.02■■■□□ 2.72
TNFSF12-202ENST00000322272 NLRP2Q9NX02 1062 aa32.02■■■□□ 2.72
TNFSF12-202ENST00000322272 LTV1Q96GA3 475 aaPredicted RBP32.01■■■□□ 2.72
TNFSF12-202ENST00000322272 PDE3BQ13370 1112 aa32■■■□□ 2.71
TNFSF12-202ENST00000322272 AMER1Q5JTC6 1135 aaPredicted RBP32■■■□□ 2.71
TNFSF12-202ENST00000322272 MYBBP1AQ9BQG0 1328 aaKnown RBP32■■■□□ 2.71
TNFSF12-202ENST00000322272 CC2D1BQ5T0F9 858 aaKnown RBP31.99■■■□□ 2.71
TNFSF12-202ENST00000322272 CCDC125Q86Z20 511 aa31.99■■■□□ 2.71
TNFSF12-202ENST00000322272 RTL1A6NKG5 1358 aa31.98■■■□□ 2.71
TNFSF12-202ENST00000322272 NSD2O96028 1365 aa31.97■■■□□ 2.71
TNFSF12-202ENST00000322272 CDCA7Q9BWT1 371 aaPredicted RBP31.96■■■□□ 2.71
TNFSF12-202ENST00000322272 DDB1Q16531 1140 aa31.94■■■□□ 2.7
TNFSF12-202ENST00000322272 YTHDC1Q96MU7 727 aaKnown RBP31.94■■■□□ 2.7
TNFSF12-202ENST00000322272 PARP4Q9UKK3 1724 aaKnown RBP31.94■■■□□ 2.7
TNFSF12-202ENST00000322272 ANKRD26Q9UPS8 1709 aa31.94■■■□□ 2.7
TNFSF12-202ENST00000322272 MRS2Q9HD23 443 aa31.93■■■□□ 2.7
TNFSF12-202ENST00000322272 EMILIN1Q9Y6C2 1016 aa31.93■■■□□ 2.7
TNFSF12-202ENST00000322272 TNNT2P45379 298 aaPredicted RBP31.93■■■□□ 2.7
TNFSF12-202ENST00000322272 DISP2A7MBM2 1401 aa31.91■■■□□ 2.7
TNFSF12-202ENST00000322272 FLT4P35916 1363 aa31.91■■■□□ 2.7
TNFSF12-202ENST00000322272 HSP90AB2PQ58FF8 381 aa31.91■■■□□ 2.7
TNFSF12-202ENST00000322272 FAM196AQ6ZSG2 479 aa31.91■■■□□ 2.7
TNFSF12-202ENST00000322272 PPM1GO15355 546 aaPredicted RBP31.9■■■□□ 2.7
TNFSF12-202ENST00000322272 SF3B2Q13435 895 aaKnown RBP31.9■■■□□ 2.7
TNFSF12-202ENST00000322272 KIF24Q5T7B8 1368 aa31.9■■■□□ 2.7
TNFSF12-202ENST00000322272 LRRC37A3O60309 1634 aa31.89■■■□□ 2.7
TNFSF12-202ENST00000322272 WNK3Q9BYP7 1800 aa31.89■■■□□ 2.69
TNFSF12-202ENST00000322272 PEAK1Q9H792 1746 aa31.88■■■□□ 2.69
TNFSF12-202ENST00000322272 INSRP06213 1382 aa31.87■■■□□ 2.69
TNFSF12-202ENST00000322272 IL2RBP14784 551 aa31.87■■■□□ 2.69
TNFSF12-202ENST00000322272 CCDC184Q52MB2 194 aa31.86■■■□□ 2.69
TNFSF12-202ENST00000322272 MORC1Q86VD1 984 aa31.86■■■□□ 2.69
TNFSF12-202ENST00000322272 SMG6Q86US8 1419 aaKnown RBP31.86■■■□□ 2.69
TNFSF12-202ENST00000322272 EXOC5O00471 708 aa31.86■■■□□ 2.69
TNFSF12-202ENST00000322272 POLKQ9UBT6 870 aa31.86■■■□□ 2.69
TNFSF12-202ENST00000322272 FAM208AQ9UK61 1670 aaKnown RBP31.85■■■□□ 2.69
TNFSF12-202ENST00000322272 DEFB132Q7Z7B7 95 aa31.83■■■□□ 2.69
TNFSF12-202ENST00000322272 TRIM37O94972 964 aa31.82■■■□□ 2.69
TNFSF12-202ENST00000322272 NBPF6Q5VWK0 638 aa31.82■■■□□ 2.69
TNFSF12-202ENST00000322272 NBPF4Q96M43 638 aa31.82■■■□□ 2.69
TNFSF12-202ENST00000322272 MARCH10Q8NA82 808 aaPredicted RBP31.82■■■□□ 2.68
TNFSF12-202ENST00000322272 OVOS2A0A0G2JMS6 1433 aa31.81■■■□□ 2.68
TNFSF12-202ENST00000322272 TNS2Q63HR2 1409 aa31.79■■■□□ 2.68
TNFSF12-202ENST00000322272 USHBP1Q8N6Y0 703 aa31.78■■■□□ 2.68
TNFSF12-202ENST00000322272 MAP2P11137 1827 aaKnown RBP31.78■■■□□ 2.68
TNFSF12-202ENST00000322272 CENPBP07199 599 aaPredicted RBP31.77■■■□□ 2.68
TNFSF12-202ENST00000322272 BAG6P46379 1132 aa31.77■■■□□ 2.68
TNFSF12-202ENST00000322272 PPP2R1AP30153 589 aa31.76■■■□□ 2.67
TNFSF12-202ENST00000322272 RGPD2P0DJD1 1756 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms