RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 COL18A1P39060 1754 aa20.31■□□□□ 0.84
TUBA3D-201ENST00000321253 BRWD3Q6RI45 1802 aa20.3■□□□□ 0.84
TUBA3D-201ENST00000321253 ABCC6O95255 1503 aa20.29■□□□□ 0.84
TUBA3D-201ENST00000321253 AXIN2Q9Y2T1 843 aa20.29■□□□□ 0.84
TUBA3D-201ENST00000321253 CRB1P82279 1406 aa20.29■□□□□ 0.84
TUBA3D-201ENST00000321253 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
TUBA3D-201ENST00000321253 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
TUBA3D-201ENST00000321253 NSD3Q9BZ95 1437 aa20.28■□□□□ 0.84
TUBA3D-201ENST00000321253 LTN1O94822 1766 aa20.27■□□□□ 0.84
TUBA3D-201ENST00000321253 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
TUBA3D-201ENST00000321253 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
TUBA3D-201ENST00000321253 THSD7AQ9UPZ6 1657 aa20.27■□□□□ 0.84
TUBA3D-201ENST00000321253 FYB1O15117 783 aa20.27■□□□□ 0.83
TUBA3D-201ENST00000321253 BARGINQ6ZT62 677 aa20.27■□□□□ 0.83
TUBA3D-201ENST00000321253 CARD14Q9BXL6 1004 aa20.27■□□□□ 0.83
TUBA3D-201ENST00000321253 GGNBP2Q9H3C7 697 aa20.27■□□□□ 0.83
TUBA3D-201ENST00000321253 THRAP3Q9Y2W1 955 aaKnown RBP20.27■□□□□ 0.83
TUBA3D-201ENST00000321253 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.83
TUBA3D-201ENST00000321253 KIF20BQ96Q89 1820 aa20.26■□□□□ 0.83
TUBA3D-201ENST00000321253 RGPD5Q99666 1765 aa20.26■□□□□ 0.83
TUBA3D-201ENST00000321253 CGNL1Q0VF96 1302 aa20.23■□□□□ 0.83
TUBA3D-201ENST00000321253 C11orf95C9JLR9 678 aaPredicted RBP20.22■□□□□ 0.83
TUBA3D-201ENST00000321253 EP400Q96L91 3159 aa20.22■□□□□ 0.83
TUBA3D-201ENST00000321253 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
TUBA3D-201ENST00000321253 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
TUBA3D-201ENST00000321253 ERBB3P21860 1342 aa20.2■□□□□ 0.82
TUBA3D-201ENST00000321253 MAP3K19Q56UN5 1328 aa20.2■□□□□ 0.82
TUBA3D-201ENST00000321253 AMPHP49418 695 aa20.2■□□□□ 0.82
TUBA3D-201ENST00000321253 IP6K1Q92551 441 aa20.2■□□□□ 0.82
TUBA3D-201ENST00000321253 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
TUBA3D-201ENST00000321253 PANK3Q9H999 370 aa20.2■□□□□ 0.82
TUBA3D-201ENST00000321253 PDE3BQ13370 1112 aa20.19■□□□□ 0.82
TUBA3D-201ENST00000321253 ANKRD24Q8TF21 1146 aa20.19■□□□□ 0.82
TUBA3D-201ENST00000321253 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
TUBA3D-201ENST00000321253 FBLN1P23142 703 aa20.18■□□□□ 0.82
TUBA3D-201ENST00000321253 CCDC7Q96M83 1385 aa20.18■□□□□ 0.82
TUBA3D-201ENST00000321253 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
TUBA3D-201ENST00000321253 SF3B2Q13435 895 aaKnown RBP20.17■□□□□ 0.82
TUBA3D-201ENST00000321253 RRS1Q15050 365 aaKnown RBP20.17■□□□□ 0.82
TUBA3D-201ENST00000321253 FAM182BQ5T319 152 aa20.17■□□□□ 0.82
TUBA3D-201ENST00000321253 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
TUBA3D-201ENST00000321253 RTL1A6NKG5 1358 aa20.16■□□□□ 0.82
TUBA3D-201ENST00000321253 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
TUBA3D-201ENST00000321253 HOXC9P31274 260 aa20.16■□□□□ 0.82
TUBA3D-201ENST00000321253 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
TUBA3D-201ENST00000321253 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
TUBA3D-201ENST00000321253 DDB1Q16531 1140 aa20.14■□□□□ 0.81
TUBA3D-201ENST00000321253 FAM196AQ6ZSG2 479 aa20.13■□□□□ 0.81
TUBA3D-201ENST00000321253 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
TUBA3D-201ENST00000321253 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
TUBA3D-201ENST00000321253 KNSTRNQ9Y448 316 aa20.12■□□□□ 0.81
TUBA3D-201ENST00000321253 NSD2O96028 1365 aa20.11■□□□□ 0.81
TUBA3D-201ENST00000321253 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
TUBA3D-201ENST00000321253 ANKRD26Q9UPS8 1709 aa20.11■□□□□ 0.81
TUBA3D-201ENST00000321253 SMG6Q86US8 1419 aaKnown RBP20.11■□□□□ 0.81
TUBA3D-201ENST00000321253 FLT4P35916 1363 aa20.1■□□□□ 0.81
TUBA3D-201ENST00000321253 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
TUBA3D-201ENST00000321253 RGPD1P0DJD0 1748 aa20.08■□□□□ 0.81
TUBA3D-201ENST00000321253 EXOC5O00471 708 aa20.08■□□□□ 0.81
TUBA3D-201ENST00000321253 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
TUBA3D-201ENST00000321253 IL2RBP14784 551 aa20.08■□□□□ 0.81
TUBA3D-201ENST00000321253 INSRP06213 1382 aa20.08■□□□□ 0.8
TUBA3D-201ENST00000321253 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
TUBA3D-201ENST00000321253 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
TUBA3D-201ENST00000321253 OVOS2A0A0G2JMS6 1433 aa20.07■□□□□ 0.8
TUBA3D-201ENST00000321253 BAG6P46379 1132 aa20.07■□□□□ 0.8
TUBA3D-201ENST00000321253 HSP90AB2PQ58FF8 381 aa20.07■□□□□ 0.8
TUBA3D-201ENST00000321253 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
TUBA3D-201ENST00000321253 WASHC2AQ641Q2 1341 aa20.06■□□□□ 0.8
TUBA3D-201ENST00000321253 TRIM37O94972 964 aa20.06■□□□□ 0.8
TUBA3D-201ENST00000321253 DEFB132Q7Z7B7 95 aa20.06■□□□□ 0.8
TUBA3D-201ENST00000321253 TNS2Q63HR2 1409 aa20.06■□□□□ 0.8
TUBA3D-201ENST00000321253 MORC1Q86VD1 984 aa20.05■□□□□ 0.8
TUBA3D-201ENST00000321253 MAP2P11137 1827 aaKnown RBP20.04■□□□□ 0.8
TUBA3D-201ENST00000321253 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
TUBA3D-201ENST00000321253 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
TUBA3D-201ENST00000321253 RGPD2P0DJD1 1756 aa20.02■□□□□ 0.8
TUBA3D-201ENST00000321253 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.8
TUBA3D-201ENST00000321253 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
TUBA3D-201ENST00000321253 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
TUBA3D-201ENST00000321253 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
TUBA3D-201ENST00000321253 APBA3O96018 575 aa19.99■□□□□ 0.79
TUBA3D-201ENST00000321253 USHBP1Q8N6Y0 703 aa19.99■□□□□ 0.79
TUBA3D-201ENST00000321253 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
TUBA3D-201ENST00000321253 EN1Q05925 392 aaPredicted RBP19.98■□□□□ 0.79
TUBA3D-201ENST00000321253 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
TUBA3D-201ENST00000321253 BCL9O00512 1426 aa19.98■□□□□ 0.79
TUBA3D-201ENST00000321253 SBF2Q86WG5 1849 aa19.96■□□□□ 0.79
TUBA3D-201ENST00000321253 MEGF6O75095 1541 aa19.96■□□□□ 0.79
TUBA3D-201ENST00000321253 TATP17735 454 aaPredicted RBP19.95■□□□□ 0.78
TUBA3D-201ENST00000321253 CC2D1BQ5T0F9 858 aaKnown RBP19.95■□□□□ 0.78
TUBA3D-201ENST00000321253 DDX54Q8TDD1 881 aaKnown RBP19.95■□□□□ 0.78
TUBA3D-201ENST00000321253 BCL11BQ9C0K0 894 aaPredicted RBP19.95■□□□□ 0.78
TUBA3D-201ENST00000321253 ZCRB1Q8TBF4 217 aaKnown RBP19.94■□□□□ 0.78
TUBA3D-201ENST00000321253 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
TUBA3D-201ENST00000321253 NPC1L1Q9UHC9 1359 aa19.92■□□□□ 0.78
TUBA3D-201ENST00000321253 CNGB1Q14028 1251 aaPredicted RBP19.92■□□□□ 0.78
TUBA3D-201ENST00000321253 EIF4A2Q14240 407 aaKnown RBP19.92■□□□□ 0.78
TUBA3D-201ENST00000321253 EZH2Q15910 746 aaKnown RBP19.92■□□□□ 0.78
TUBA3D-201ENST00000321253 CAMKK2Q96RR4 588 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms