RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ARHGEF25Q86VW2 580 aa20.4■□□□□ 0.86
RPP40-201ENST00000319533 WDR17Q8IZU2 1322 aa20.4■□□□□ 0.86
RPP40-201ENST00000319533 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
RPP40-201ENST00000319533 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
RPP40-201ENST00000319533 BCL9O00512 1426 aa20.38■□□□□ 0.85
RPP40-201ENST00000319533 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
RPP40-201ENST00000319533 TOM1L2Q6ZVM7 507 aa20.38■□□□□ 0.85
RPP40-201ENST00000319533 RGPD3A6NKT7 1758 aaPredicted RBP20.38■□□□□ 0.85
RPP40-201ENST00000319533 RGPD4Q7Z3J3 1758 aa20.38■□□□□ 0.85
RPP40-201ENST00000319533 PLSCR1O15162 318 aa20.37■□□□□ 0.85
RPP40-201ENST00000319533 DDB1Q16531 1140 aa20.37■□□□□ 0.85
RPP40-201ENST00000319533 CDCA7Q9BWT1 371 aaPredicted RBP20.37■□□□□ 0.85
RPP40-201ENST00000319533 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
RPP40-201ENST00000319533 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
RPP40-201ENST00000319533 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
RPP40-201ENST00000319533 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
RPP40-201ENST00000319533 NFAT5O94916 1531 aa20.35■□□□□ 0.85
RPP40-201ENST00000319533 ABCC6O95255 1503 aa20.34■□□□□ 0.85
RPP40-201ENST00000319533 NEUROD1Q13562 356 aa20.34■□□□□ 0.85
RPP40-201ENST00000319533 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
RPP40-201ENST00000319533 MARCH10Q8NA82 808 aaPredicted RBP20.33■□□□□ 0.85
RPP40-201ENST00000319533 KTN1Q86UP2 1357 aaKnown RBP20.33■□□□□ 0.84
RPP40-201ENST00000319533 RGPD5Q99666 1765 aa20.32■□□□□ 0.84
RPP40-201ENST00000319533 MON2Q7Z3U7 1717 aa20.32■□□□□ 0.84
RPP40-201ENST00000319533 USP31Q70CQ4 1352 aa20.32■□□□□ 0.84
RPP40-201ENST00000319533 USP54Q70EL1 1684 aa20.31■□□□□ 0.84
RPP40-201ENST00000319533 PTF1AQ7RTS3 328 aa20.3■□□□□ 0.84
RPP40-201ENST00000319533 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
RPP40-201ENST00000319533 SPON1Q9HCB6 807 aa20.29■□□□□ 0.84
RPP40-201ENST00000319533 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
RPP40-201ENST00000319533 CD163L1Q9NR16 1453 aa20.29■□□□□ 0.84
RPP40-201ENST00000319533 KCNQ2O43526 872 aa20.28■□□□□ 0.84
RPP40-201ENST00000319533 PROM2Q8N271 834 aa20.28■□□□□ 0.84
RPP40-201ENST00000319533 SOX12O15370 315 aa20.27■□□□□ 0.84
RPP40-201ENST00000319533 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
RPP40-201ENST00000319533 EXOC5O00471 708 aa20.26■□□□□ 0.83
RPP40-201ENST00000319533 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
RPP40-201ENST00000319533 CARD11Q9BXL7 1154 aa20.25■□□□□ 0.83
RPP40-201ENST00000319533 CASZ1Q86V15 1759 aa20.24■□□□□ 0.83
RPP40-201ENST00000319533 PUS7Q96PZ0 661 aaKnown RBP20.24■□□□□ 0.83
RPP40-201ENST00000319533 TNS2Q63HR2 1409 aa20.24■□□□□ 0.83
RPP40-201ENST00000319533 NME9Q86XW9 330 aa20.23■□□□□ 0.83
RPP40-201ENST00000319533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPP40-201ENST00000319533 ERBB3P21860 1342 aa20.23■□□□□ 0.83
RPP40-201ENST00000319533 NINLQ9Y2I6 1382 aa20.22■□□□□ 0.83
RPP40-201ENST00000319533 EDC4Q6P2E9 1401 aaKnown RBP20.21■□□□□ 0.83
RPP40-201ENST00000319533 TXNRD1Q16881 649 aa20.2■□□□□ 0.82
RPP40-201ENST00000319533 HDGFL2Q7Z4V5 671 aaPredicted RBP20.2■□□□□ 0.82
RPP40-201ENST00000319533 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
RPP40-201ENST00000319533 PPP1R1BQ9UD71 204 aaPredicted RBP20.2■□□□□ 0.82
RPP40-201ENST00000319533 LTN1O94822 1766 aa20.18■□□□□ 0.82
RPP40-201ENST00000319533 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
RPP40-201ENST00000319533 NHSQ6T4R5 1651 aa20.18■□□□□ 0.82
RPP40-201ENST00000319533 PDGFDQ9GZP0 370 aaPredicted RBP20.17■□□□□ 0.82
RPP40-201ENST00000319533 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
RPP40-201ENST00000319533 A0A1W2PP64 1363 aa20.17■□□□□ 0.82
RPP40-201ENST00000319533 IL2RBP14784 551 aa20.16■□□□□ 0.82
RPP40-201ENST00000319533 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
RPP40-201ENST00000319533 NLRP2Q9NX02 1062 aa20.16■□□□□ 0.82
RPP40-201ENST00000319533 SLC15A2Q16348 729 aa20.15■□□□□ 0.82
RPP40-201ENST00000319533 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
RPP40-201ENST00000319533 PTGER2P43116 358 aa20.14■□□□□ 0.81
RPP40-201ENST00000319533 TESK2Q96S53 571 aa20.14■□□□□ 0.81
RPP40-201ENST00000319533 STK32BQ9NY57 414 aa20.14■□□□□ 0.81
RPP40-201ENST00000319533 IP6K1Q92551 441 aa20.13■□□□□ 0.81
RPP40-201ENST00000319533 YY1P25490 414 aa20.12■□□□□ 0.81
RPP40-201ENST00000319533 ZBTB7AO95365 584 aa20.11■□□□□ 0.81
RPP40-201ENST00000319533 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
RPP40-201ENST00000319533 PAPPAQ13219 1627 aa20.11■□□□□ 0.81
RPP40-201ENST00000319533 SLC24A1O60721 1099 aa20.1■□□□□ 0.81
RPP40-201ENST00000319533 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
RPP40-201ENST00000319533 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
RPP40-201ENST00000319533 SGIP1Q9BQI5 828 aa20.09■□□□□ 0.81
RPP40-201ENST00000319533 MYOM1P52179 1685 aa20.09■□□□□ 0.81
RPP40-201ENST00000319533 FAM208AQ9UK61 1670 aaKnown RBP20.09■□□□□ 0.81
RPP40-201ENST00000319533 BTAF1O14981 1849 aa20.09■□□□□ 0.81
RPP40-201ENST00000319533 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
RPP40-201ENST00000319533 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
RPP40-201ENST00000319533 ST20-MTHFSA0A0A6YYL1 179 aa20.07■□□□□ 0.8
RPP40-201ENST00000319533 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
RPP40-201ENST00000319533 COG3Q96JB2 828 aa20.05■□□□□ 0.8
RPP40-201ENST00000319533 MAP3K19Q56UN5 1328 aa20.04■□□□□ 0.8
RPP40-201ENST00000319533 LRRC4BQ9NT99 713 aa20.04■□□□□ 0.8
RPP40-201ENST00000319533 HOXC9P31274 260 aa20.03■□□□□ 0.8
RPP40-201ENST00000319533 ANKRD36BQ8N2N9 1353 aa20.03■□□□□ 0.8
RPP40-201ENST00000319533 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
RPP40-201ENST00000319533 SYT17Q9BSW7 474 aa20.02■□□□□ 0.8
RPP40-201ENST00000319533 ZNF827Q17R98 1081 aa20.01■□□□□ 0.79
RPP40-201ENST00000319533 AKT1S1Q96B36 256 aa20.01■□□□□ 0.79
RPP40-201ENST00000319533 LTV1Q96GA3 475 aaPredicted RBP20.01■□□□□ 0.79
RPP40-201ENST00000319533 FHDC1Q9C0D6 1143 aaPredicted RBP20.01■□□□□ 0.79
RPP40-201ENST00000319533 UTRNP46939 3433 aa20■□□□□ 0.79
RPP40-201ENST00000319533 RTL1A6NKG5 1358 aa20■□□□□ 0.79
RPP40-201ENST00000319533 MAP3K5Q99683 1374 aa20■□□□□ 0.79
RPP40-201ENST00000319533 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
RPP40-201ENST00000319533 KAT6BQ8WYB5 2073 aa19.99■□□□□ 0.79
RPP40-201ENST00000319533 FBLN1P23142 703 aa19.99■□□□□ 0.79
RPP40-201ENST00000319533 AMPHP49418 695 aa19.99■□□□□ 0.79
RPP40-201ENST00000319533 QSER1Q2KHR3 1735 aa19.99■□□□□ 0.79
RPP40-201ENST00000319533 ARXQ96QS3 562 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms