RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
LRRC42-201ENST00000319223 CGNL1Q0VF96 1302 aa22.87■■□□□ 1.25
LRRC42-201ENST00000319223 SPATA31A5Q5VU36 1347 aa22.87■■□□□ 1.25
LRRC42-201ENST00000319223 SPATA31A7Q8IWB4 1347 aa22.87■■□□□ 1.25
LRRC42-201ENST00000319223 COL5A2P05997 1499 aaPredicted RBP22.87■■□□□ 1.25
LRRC42-201ENST00000319223 CDK12Q9NYV4 1490 aaPredicted RBP22.87■■□□□ 1.25
LRRC42-201ENST00000319223 RGPD5Q99666 1765 aa22.86■■□□□ 1.25
LRRC42-201ENST00000319223 LTN1O94822 1766 aa22.86■■□□□ 1.25
LRRC42-201ENST00000319223 MAP3K19Q56UN5 1328 aa22.85■■□□□ 1.25
LRRC42-201ENST00000319223 SPATA31A1Q5TZJ5 1347 aa22.85■■□□□ 1.25
LRRC42-201ENST00000319223 RRS1Q15050 365 aaKnown RBP22.84■■□□□ 1.25
LRRC42-201ENST00000319223 USP35Q9P2H5 1018 aa22.83■■□□□ 1.25
LRRC42-201ENST00000319223 PER1O15534 1290 aaPredicted RBP22.82■■□□□ 1.24
LRRC42-201ENST00000319223 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
LRRC42-201ENST00000319223 ONECUT3O60422 494 aaPredicted RBP22.82■■□□□ 1.24
LRRC42-201ENST00000319223 SOCS7O14512 581 aa22.81■■□□□ 1.24
LRRC42-201ENST00000319223 KNSTRNQ9Y448 316 aa22.81■■□□□ 1.24
LRRC42-201ENST00000319223 SEPT12Q8IYM1 358 aa22.79■■□□□ 1.24
LRRC42-201ENST00000319223 IP6K1Q92551 441 aa22.79■■□□□ 1.24
LRRC42-201ENST00000319223 ABCC6O95255 1503 aa22.79■■□□□ 1.24
LRRC42-201ENST00000319223 WDR17Q8IZU2 1322 aa22.79■■□□□ 1.24
LRRC42-201ENST00000319223 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
LRRC42-201ENST00000319223 HOXC9P31274 260 aa22.78■■□□□ 1.24
LRRC42-201ENST00000319223 TOM1L2Q6ZVM7 507 aa22.78■■□□□ 1.24
LRRC42-201ENST00000319223 CRB1P82279 1406 aa22.78■■□□□ 1.24
LRRC42-201ENST00000319223 TNNT2P45379 298 aaPredicted RBP22.77■■□□□ 1.24
LRRC42-201ENST00000319223 AMPHP49418 695 aa22.77■■□□□ 1.24
LRRC42-201ENST00000319223 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
LRRC42-201ENST00000319223 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.23
LRRC42-201ENST00000319223 ERBB3P21860 1342 aa22.76■■□□□ 1.23
LRRC42-201ENST00000319223 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
LRRC42-201ENST00000319223 EMILIN1Q9Y6C2 1016 aa22.76■■□□□ 1.23
LRRC42-201ENST00000319223 TCP11L2Q8N4U5 519 aa22.75■■□□□ 1.23
LRRC42-201ENST00000319223 LTV1Q96GA3 475 aaPredicted RBP22.75■■□□□ 1.23
LRRC42-201ENST00000319223 PEAK1Q9H792 1746 aa22.75■■□□□ 1.23
LRRC42-201ENST00000319223 A0A0G2JS52 829 aa22.74■■□□□ 1.23
LRRC42-201ENST00000319223 MYT1Q01538 1121 aa22.74■■□□□ 1.23
LRRC42-201ENST00000319223 BRWD3Q6RI45 1802 aa22.74■■□□□ 1.23
LRRC42-201ENST00000319223 NSD2O96028 1365 aa22.74■■□□□ 1.23
LRRC42-201ENST00000319223 BLMP54132 1417 aaPredicted RBP22.74■■□□□ 1.23
LRRC42-201ENST00000319223 BARGINQ6ZT62 677 aa22.74■■□□□ 1.23
LRRC42-201ENST00000319223 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
LRRC42-201ENST00000319223 THSD7AQ9UPZ6 1657 aa22.72■■□□□ 1.23
LRRC42-201ENST00000319223 MORC1Q86VD1 984 aa22.72■■□□□ 1.23
LRRC42-201ENST00000319223 CARD10Q9BWT7 1032 aa22.72■■□□□ 1.23
LRRC42-201ENST00000319223 POLKQ9UBT6 870 aa22.72■■□□□ 1.23
LRRC42-201ENST00000319223 CC2D1BQ5T0F9 858 aaKnown RBP22.71■■□□□ 1.23
LRRC42-201ENST00000319223 THRAP3Q9Y2W1 955 aaKnown RBP22.71■■□□□ 1.23
LRRC42-201ENST00000319223 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
LRRC42-201ENST00000319223 PPM1GO15355 546 aaPredicted RBP22.71■■□□□ 1.23
LRRC42-201ENST00000319223 CNGB1Q14028 1251 aaPredicted RBP22.71■■□□□ 1.23
LRRC42-201ENST00000319223 MAP2P11137 1827 aaKnown RBP22.71■■□□□ 1.23
LRRC42-201ENST00000319223 NLRP2Q9NX02 1062 aa22.7■■□□□ 1.22
LRRC42-201ENST00000319223 FLT4P35916 1363 aa22.69■■□□□ 1.22
LRRC42-201ENST00000319223 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
LRRC42-201ENST00000319223 INSRP06213 1382 aa22.67■■□□□ 1.22
LRRC42-201ENST00000319223 FAM182BQ5T319 152 aa22.67■■□□□ 1.22
LRRC42-201ENST00000319223 KIF24Q5T7B8 1368 aa22.67■■□□□ 1.22
LRRC42-201ENST00000319223 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.22
LRRC42-201ENST00000319223 RGPD2P0DJD1 1756 aa22.65■■□□□ 1.22
LRRC42-201ENST00000319223 NBPF6Q5VWK0 638 aa22.64■■□□□ 1.21
LRRC42-201ENST00000319223 NBPF4Q96M43 638 aa22.64■■□□□ 1.21
LRRC42-201ENST00000319223 NPC1L1Q9UHC9 1359 aa22.64■■□□□ 1.21
LRRC42-201ENST00000319223 DISP2A7MBM2 1401 aa22.64■■□□□ 1.21
LRRC42-201ENST00000319223 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
LRRC42-201ENST00000319223 EP400Q96L91 3159 aa22.62■■□□□ 1.21
LRRC42-201ENST00000319223 DDX10Q13206 875 aaKnown RBP22.62■■□□□ 1.21
LRRC42-201ENST00000319223 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
LRRC42-201ENST00000319223 USHBP1Q8N6Y0 703 aa22.61■■□□□ 1.21
LRRC42-201ENST00000319223 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
LRRC42-201ENST00000319223 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
LRRC42-201ENST00000319223 LRRC37A3O60309 1634 aa22.59■■□□□ 1.21
LRRC42-201ENST00000319223 PDE3BQ13370 1112 aa22.59■■□□□ 1.21
LRRC42-201ENST00000319223 IL2RBP14784 551 aa22.58■■□□□ 1.21
LRRC42-201ENST00000319223 DDB1Q16531 1140 aa22.58■■□□□ 1.21
LRRC42-201ENST00000319223 CDCA7Q9BWT1 371 aaPredicted RBP22.58■■□□□ 1.21
LRRC42-201ENST00000319223 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
LRRC42-201ENST00000319223 MTHFSP49914 203 aa22.57■■□□□ 1.2
LRRC42-201ENST00000319223 EYA1Q99502 592 aa22.55■■□□□ 1.2
LRRC42-201ENST00000319223 EXOC5O00471 708 aa22.54■■□□□ 1.2
LRRC42-201ENST00000319223 MARCH10Q8NA82 808 aaPredicted RBP22.54■■□□□ 1.2
LRRC42-201ENST00000319223 MEGF6O75095 1541 aa22.53■■□□□ 1.2
LRRC42-201ENST00000319223 FAM196AQ6ZSG2 479 aa22.51■■□□□ 1.19
LRRC42-201ENST00000319223 TNS2Q63HR2 1409 aa22.51■■□□□ 1.19
LRRC42-201ENST00000319223 ZNF316A6NFI3 1004 aaPredicted RBP22.5■■□□□ 1.19
LRRC42-201ENST00000319223 NCAPD2Q15021 1401 aa22.5■■□□□ 1.19
LRRC42-201ENST00000319223 IL13P35225 146 aa22.49■■□□□ 1.19
LRRC42-201ENST00000319223 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
LRRC42-201ENST00000319223 RAPGEF4Q8WZA2 1011 aa22.48■■□□□ 1.19
LRRC42-201ENST00000319223 OVOS2A0A0G2JMS6 1433 aa22.47■■□□□ 1.19
LRRC42-201ENST00000319223 TRIM37O94972 964 aa22.47■■□□□ 1.19
LRRC42-201ENST00000319223 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
LRRC42-201ENST00000319223 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.19
LRRC42-201ENST00000319223 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.19
LRRC42-201ENST00000319223 DDX54Q8TDD1 881 aaKnown RBP22.45■■□□□ 1.19
LRRC42-201ENST00000319223 CCDC125Q86Z20 511 aa22.45■■□□□ 1.18
LRRC42-201ENST00000319223 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
LRRC42-201ENST00000319223 PTF1AQ7RTS3 328 aa22.44■■□□□ 1.18
LRRC42-201ENST00000319223 DEFB132Q7Z7B7 95 aa22.44■■□□□ 1.18
LRRC42-201ENST00000319223 AEBP1Q8IUX7 1158 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms