RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
LTBP4-204ENST00000318809 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
LTBP4-204ENST00000318809 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
LTBP4-204ENST00000318809 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
LTBP4-204ENST00000318809 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
LTBP4-204ENST00000318809 RTL1A6NKG5 1358 aa23.52■■□□□ 1.35
LTBP4-204ENST00000318809 PRDM11Q9NQV5 511 aa23.51■■□□□ 1.35
LTBP4-204ENST00000318809 COL18A1P39060 1754 aa23.51■■□□□ 1.35
LTBP4-204ENST00000318809 FAM83GA6ND36 823 aa23.5■■□□□ 1.35
LTBP4-204ENST00000318809 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
LTBP4-204ENST00000318809 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
LTBP4-204ENST00000318809 SPATA31A6Q5VVP1 1343 aa23.48■■□□□ 1.35
LTBP4-204ENST00000318809 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
LTBP4-204ENST00000318809 IL13P35225 146 aa23.47■■□□□ 1.35
LTBP4-204ENST00000318809 EIF4A2Q14240 407 aaKnown RBP23.47■■□□□ 1.35
LTBP4-204ENST00000318809 LRP6O75581 1613 aa23.46■■□□□ 1.35
LTBP4-204ENST00000318809 RGPD5Q99666 1765 aa23.46■■□□□ 1.35
LTBP4-204ENST00000318809 LMO7Q8WWI1 1683 aa23.46■■□□□ 1.35
LTBP4-204ENST00000318809 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
LTBP4-204ENST00000318809 ABCC6O95255 1503 aa23.45■■□□□ 1.34
LTBP4-204ENST00000318809 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
LTBP4-204ENST00000318809 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
LTBP4-204ENST00000318809 FAM9BQ8IZU0 186 aa23.43■■□□□ 1.34
LTBP4-204ENST00000318809 ANKRD24Q8TF21 1146 aa23.42■■□□□ 1.34
LTBP4-204ENST00000318809 COL14A1Q05707 1796 aaKnown RBP23.41■■□□□ 1.34
LTBP4-204ENST00000318809 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
LTBP4-204ENST00000318809 ADAMTS8Q9UP79 889 aa23.41■■□□□ 1.34
LTBP4-204ENST00000318809 WDR43Q15061 677 aaKnown RBP eCLIP23.4■■□□□ 1.34
LTBP4-204ENST00000318809 NUDCQ9Y266 331 aa23.4■■□□□ 1.34
LTBP4-204ENST00000318809 ERBB3P21860 1342 aa23.4■■□□□ 1.34
LTBP4-204ENST00000318809 BTG4Q9NY30 223 aa23.39■■□□□ 1.34
LTBP4-204ENST00000318809 COL5A2P05997 1499 aaPredicted RBP23.38■■□□□ 1.33
LTBP4-204ENST00000318809 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
LTBP4-204ENST00000318809 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
LTBP4-204ENST00000318809 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
LTBP4-204ENST00000318809 EYA1Q99502 592 aa23.38■■□□□ 1.33
LTBP4-204ENST00000318809 NBPF6Q5VWK0 638 aa23.36■■□□□ 1.33
LTBP4-204ENST00000318809 NBPF4Q96M43 638 aa23.36■■□□□ 1.33
LTBP4-204ENST00000318809 C8orf37Q96NL8 207 aa23.36■■□□□ 1.33
LTBP4-204ENST00000318809 PLCH1Q4KWH8 1693 aa23.36■■□□□ 1.33
LTBP4-204ENST00000318809 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
LTBP4-204ENST00000318809 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
LTBP4-204ENST00000318809 AEBP1Q8IUX7 1158 aa23.35■■□□□ 1.33
LTBP4-204ENST00000318809 HMOX1P09601 288 aa23.34■■□□□ 1.33
LTBP4-204ENST00000318809 STRN4Q9NRL3 753 aa23.34■■□□□ 1.33
LTBP4-204ENST00000318809 SLIT2O94813 1529 aa23.34■■□□□ 1.33
LTBP4-204ENST00000318809 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
LTBP4-204ENST00000318809 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
LTBP4-204ENST00000318809 NGLY1Q96IV0 654 aa23.33■■□□□ 1.33
LTBP4-204ENST00000318809 WDR17Q8IZU2 1322 aa23.33■■□□□ 1.33
LTBP4-204ENST00000318809 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.32
LTBP4-204ENST00000318809 EVA1CP58658 441 aa23.32■■□□□ 1.32
LTBP4-204ENST00000318809 MEX3CQ5U5Q3 659 aaKnown RBP23.32■■□□□ 1.32
LTBP4-204ENST00000318809 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
LTBP4-204ENST00000318809 NLRP2Q9NX02 1062 aa23.31■■□□□ 1.32
LTBP4-204ENST00000318809 NRAPQ86VF7 1730 aa23.31■■□□□ 1.32
LTBP4-204ENST00000318809 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
LTBP4-204ENST00000318809 FNBP4Q8N3X1 1017 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-204ENST00000318809 RSPH6AQ9H0K4 717 aa23.3■■□□□ 1.32
LTBP4-204ENST00000318809 CCDC146Q8IYE0 955 aa23.3■■□□□ 1.32
LTBP4-204ENST00000318809 KDRP35968 1356 aa23.3■■□□□ 1.32
LTBP4-204ENST00000318809 NWD2Q9ULI1 1742 aa23.29■■□□□ 1.32
LTBP4-204ENST00000318809 NCAPD2Q15021 1401 aa23.29■■□□□ 1.32
LTBP4-204ENST00000318809 FCHSD2O94868 740 aa23.29■■□□□ 1.32
LTBP4-204ENST00000318809 BCL9LQ86UU0 1499 aa23.29■■□□□ 1.32
LTBP4-204ENST00000318809 TOM1L2Q6ZVM7 507 aa23.28■■□□□ 1.32
LTBP4-204ENST00000318809 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
LTBP4-204ENST00000318809 PLEKHF1Q96S99 279 aa23.28■■□□□ 1.32
LTBP4-204ENST00000318809 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
LTBP4-204ENST00000318809 UNC5CLQ8IV45 518 aa23.26■■□□□ 1.31
LTBP4-204ENST00000318809 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
LTBP4-204ENST00000318809 CARD10Q9BWT7 1032 aa23.25■■□□□ 1.31
LTBP4-204ENST00000318809 CRB1P82279 1406 aa23.25■■□□□ 1.31
LTBP4-204ENST00000318809 AFF2P51816 1311 aa23.24■■□□□ 1.31
LTBP4-204ENST00000318809 ILDR1Q86SU0 546 aaPredicted RBP23.24■■□□□ 1.31
LTBP4-204ENST00000318809 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
LTBP4-204ENST00000318809 PHACTR3Q96KR7 559 aa23.24■■□□□ 1.31
LTBP4-204ENST00000318809 USP21Q9UK80 565 aa23.24■■□□□ 1.31
LTBP4-204ENST00000318809 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
LTBP4-204ENST00000318809 APAF1O14727 1248 aa23.19■■□□□ 1.3
LTBP4-204ENST00000318809 PNNQ9H307 717 aaKnown RBP23.19■■□□□ 1.3
LTBP4-204ENST00000318809 SPATA31A1Q5TZJ5 1347 aa23.19■■□□□ 1.3
LTBP4-204ENST00000318809 SPATA31A5Q5VU36 1347 aa23.19■■□□□ 1.3
LTBP4-204ENST00000318809 SPATA31A7Q8IWB4 1347 aa23.19■■□□□ 1.3
LTBP4-204ENST00000318809 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.19■■□□□ 1.3
LTBP4-204ENST00000318809 VPS72Q15906 364 aa23.19■■□□□ 1.3
LTBP4-204ENST00000318809 MEGF6O75095 1541 aa23.19■■□□□ 1.3
LTBP4-204ENST00000318809 ZBED9Q6R2W3 1325 aa23.18■■□□□ 1.3
LTBP4-204ENST00000318809 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
LTBP4-204ENST00000318809 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
LTBP4-204ENST00000318809 CCDC9Q9Y3X0 531 aaKnown RBP23.16■■□□□ 1.3
LTBP4-204ENST00000318809 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
LTBP4-204ENST00000318809 RRP7AQ9Y3A4 280 aaKnown RBP23.16■■□□□ 1.3
LTBP4-204ENST00000318809 MTHFSDQ2M296 383 aaKnown RBP23.14■■□□□ 1.3
LTBP4-204ENST00000318809 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-204ENST00000318809 TMPOP42166 694 aaKnown RBP23.13■■□□□ 1.29
LTBP4-204ENST00000318809 SALL2Q9Y467 1007 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-204ENST00000318809 ATRNO75882 1429 aa23.13■■□□□ 1.29
LTBP4-204ENST00000318809 NEFMP07197 916 aa23.13■■□□□ 1.29
LTBP4-204ENST00000318809 IL2RBP14784 551 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms