RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 SLIT3O75094 1523 aa13.34□□□□□ -0.27
GINS3-201ENST00000318129 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
GINS3-201ENST00000318129 SOX12O15370 315 aa13.33□□□□□ -0.28
GINS3-201ENST00000318129 GCP02774 474 aa13.33□□□□□ -0.28
GINS3-201ENST00000318129 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.28
GINS3-201ENST00000318129 AMPHP49418 695 aa13.33□□□□□ -0.28
GINS3-201ENST00000318129 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
GINS3-201ENST00000318129 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
GINS3-201ENST00000318129 ROBO1Q9Y6N7 1651 aa13.33□□□□□ -0.28
GINS3-201ENST00000318129 FLT4P35916 1363 aa13.32□□□□□ -0.28
GINS3-201ENST00000318129 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
GINS3-201ENST00000318129 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
GINS3-201ENST00000318129 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
GINS3-201ENST00000318129 BLMP54132 1417 aaPredicted RBP13.32□□□□□ -0.28
GINS3-201ENST00000318129 NFAT5O94916 1531 aa13.32□□□□□ -0.28
GINS3-201ENST00000318129 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
GINS3-201ENST00000318129 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
GINS3-201ENST00000318129 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
GINS3-201ENST00000318129 MED1Q15648 1581 aaPredicted RBP13.31□□□□□ -0.28
GINS3-201ENST00000318129 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
GINS3-201ENST00000318129 IL13P35225 146 aa13.3□□□□□ -0.28
GINS3-201ENST00000318129 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
GINS3-201ENST00000318129 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
GINS3-201ENST00000318129 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
GINS3-201ENST00000318129 IP6K1Q92551 441 aa13.29□□□□□ -0.28
GINS3-201ENST00000318129 PEAK1Q9H792 1746 aa13.29□□□□□ -0.28
GINS3-201ENST00000318129 HOXC9P31274 260 aa13.29□□□□□ -0.28
GINS3-201ENST00000318129 HSP90AB2PQ58FF8 381 aa13.29□□□□□ -0.28
GINS3-201ENST00000318129 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 LTN1O94822 1766 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
GINS3-201ENST00000318129 FCHSD2O94868 740 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
GINS3-201ENST00000318129 RUNDC1Q96C34 613 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
GINS3-201ENST00000318129 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.29
GINS3-201ENST00000318129 CPDO75976 1380 aa13.26□□□□□ -0.29
GINS3-201ENST00000318129 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
GINS3-201ENST00000318129 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
GINS3-201ENST00000318129 NEFMP07197 916 aa13.25□□□□□ -0.29
GINS3-201ENST00000318129 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
GINS3-201ENST00000318129 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
GINS3-201ENST00000318129 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
GINS3-201ENST00000318129 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
GINS3-201ENST00000318129 ABCC6O95255 1503 aa13.25□□□□□ -0.29
GINS3-201ENST00000318129 ZBTB7CA1YPR0 619 aa13.24□□□□□ -0.29
GINS3-201ENST00000318129 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
GINS3-201ENST00000318129 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
GINS3-201ENST00000318129 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
GINS3-201ENST00000318129 APAF1O14727 1248 aa13.23□□□□□ -0.29
GINS3-201ENST00000318129 PLEKHF1Q96S99 279 aa13.23□□□□□ -0.29
GINS3-201ENST00000318129 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
GINS3-201ENST00000318129 EP400Q96L91 3159 aa13.22□□□□□ -0.29
GINS3-201ENST00000318129 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
GINS3-201ENST00000318129 RGPD1P0DJD0 1748 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 KIAA0232Q92628 1395 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 HMOX1P09601 288 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 PDE3BQ13370 1112 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 EYA1Q99502 592 aa13.21□□□□□ -0.29
GINS3-201ENST00000318129 ABCA3Q99758 1704 aa13.21□□□□□ -0.3
GINS3-201ENST00000318129 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
GINS3-201ENST00000318129 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
GINS3-201ENST00000318129 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
GINS3-201ENST00000318129 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
GINS3-201ENST00000318129 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
GINS3-201ENST00000318129 COL18A1P39060 1754 aa13.2□□□□□ -0.3
GINS3-201ENST00000318129 KDRP35968 1356 aa13.19□□□□□ -0.3
GINS3-201ENST00000318129 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
GINS3-201ENST00000318129 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
GINS3-201ENST00000318129 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
GINS3-201ENST00000318129 BRPF3Q9ULD4 1205 aa13.18□□□□□ -0.3
GINS3-201ENST00000318129 TMPOP42166 694 aaKnown RBP13.18□□□□□ -0.3
GINS3-201ENST00000318129 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
GINS3-201ENST00000318129 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
GINS3-201ENST00000318129 ERBB3P21860 1342 aa13.17□□□□□ -0.3
GINS3-201ENST00000318129 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
GINS3-201ENST00000318129 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
GINS3-201ENST00000318129 JCADQ9P266 1359 aa13.16□□□□□ -0.3
GINS3-201ENST00000318129 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
GINS3-201ENST00000318129 PKNOX2Q96KN3 472 aa13.16□□□□□ -0.3
GINS3-201ENST00000318129 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
GINS3-201ENST00000318129 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 RIPK4P57078 832 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 WDR63Q8IWG1 891 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
GINS3-201ENST00000318129 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
GINS3-201ENST00000318129 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.3
GINS3-201ENST00000318129 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
GINS3-201ENST00000318129 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms