RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 SF3B2Q13435 895 aaKnown RBP37.51■■■■□ 3.6
PGAM5-201ENST00000317555 CRB1P82279 1406 aa37.51■■■■□ 3.59
PGAM5-201ENST00000317555 THRAP3Q9Y2W1 955 aaKnown RBP37.5■■■■□ 3.59
PGAM5-201ENST00000317555 RGPD5Q99666 1765 aa37.49■■■■□ 3.59
PGAM5-201ENST00000317555 AXIN2Q9Y2T1 843 aa37.47■■■■□ 3.59
PGAM5-201ENST00000317555 FAM182BQ5T319 152 aa37.46■■■■□ 3.59
PGAM5-201ENST00000317555 ABCC6O95255 1503 aa37.43■■■■□ 3.58
PGAM5-201ENST00000317555 CDCA8Q53HL2 280 aa37.43■■■■□ 3.58
PGAM5-201ENST00000317555 TOM1L2Q6ZVM7 507 aa37.43■■■■□ 3.58
PGAM5-201ENST00000317555 WDR17Q8IZU2 1322 aa37.42■■■■□ 3.58
PGAM5-201ENST00000317555 LTN1O94822 1766 aa37.42■■■■□ 3.58
PGAM5-201ENST00000317555 ANKRD36BQ8N2N9 1353 aa37.42■■■■□ 3.58
PGAM5-201ENST00000317555 RGPD1P0DJD0 1748 aa37.41■■■■□ 3.58
PGAM5-201ENST00000317555 PARP4Q9UKK3 1724 aaKnown RBP37.41■■■■□ 3.58
PGAM5-201ENST00000317555 OVOS2A0A0J9YW53 1432 aa37.4■■■■□ 3.58
PGAM5-201ENST00000317555 OVOS2Q6IE36 1432 aa37.4■■■■□ 3.58
PGAM5-201ENST00000317555 DEFB132Q7Z7B7 95 aa37.4■■■■□ 3.58
PGAM5-201ENST00000317555 PDE3BQ13370 1112 aa37.39■■■■□ 3.58
PGAM5-201ENST00000317555 CSB-PGBD3P0DP91 1061 aa37.36■■■■□ 3.57
PGAM5-201ENST00000317555 FAM196AQ6ZSG2 479 aa37.36■■■■□ 3.57
PGAM5-201ENST00000317555 WNK3Q9BYP7 1800 aa37.34■■■■□ 3.57
PGAM5-201ENST00000317555 BAG6P46379 1132 aa37.34■■■■□ 3.57
PGAM5-201ENST00000317555 TNS1Q9HBL0 1735 aaKnown RBP37.31■■■■□ 3.56
PGAM5-201ENST00000317555 COG3Q96JB2 828 aa37.31■■■■□ 3.56
PGAM5-201ENST00000317555 CARD10Q9BWT7 1032 aa37.3■■■■□ 3.56
PGAM5-201ENST00000317555 LRRC37A3O60309 1634 aa37.29■■■■□ 3.56
PGAM5-201ENST00000317555 MYOM1P52179 1685 aa37.28■■■■□ 3.56
PGAM5-201ENST00000317555 CDCA7Q9BWT1 371 aaPredicted RBP37.26■■■■□ 3.56
PGAM5-201ENST00000317555 TRIM37O94972 964 aa37.25■■■■□ 3.55
PGAM5-201ENST00000317555 ERBB3P21860 1342 aa37.25■■■■□ 3.55
PGAM5-201ENST00000317555 DDB1Q16531 1140 aa37.24■■■■□ 3.55
PGAM5-201ENST00000317555 CCDC7Q96M83 1385 aa37.24■■■■□ 3.55
PGAM5-201ENST00000317555 DISP2A7MBM2 1401 aa37.22■■■■□ 3.55
PGAM5-201ENST00000317555 EIF4G2P78344 907 aaKnown RBP eCLIP37.22■■■■□ 3.55
PGAM5-201ENST00000317555 EN1Q05925 392 aaPredicted RBP37.21■■■■□ 3.55
PGAM5-201ENST00000317555 KIF20BQ96Q89 1820 aa37.21■■■■□ 3.55
PGAM5-201ENST00000317555 C11orf95C9JLR9 678 aaPredicted RBP37.2■■■■□ 3.55
PGAM5-201ENST00000317555 OVOS2A0A0G2JMS6 1433 aa37.19■■■■□ 3.54
PGAM5-201ENST00000317555 FYB1O15117 783 aa37.19■■■■□ 3.54
PGAM5-201ENST00000317555 ANKRD24Q8TF21 1146 aa37.18■■■■□ 3.54
PGAM5-201ENST00000317555 IP6K1Q92551 441 aa37.18■■■■□ 3.54
PGAM5-201ENST00000317555 GGNBP2Q9H3C7 697 aa37.18■■■■□ 3.54
PGAM5-201ENST00000317555 NLRP2Q9NX02 1062 aa37.18■■■■□ 3.54
PGAM5-201ENST00000317555 PEAK1Q9H792 1746 aa37.18■■■■□ 3.54
PGAM5-201ENST00000317555 HSPA5P11021 654 aaKnown RBP37.16■■■■□ 3.54
PGAM5-201ENST00000317555 MAP3K19Q56UN5 1328 aa37.14■■■■□ 3.54
PGAM5-201ENST00000317555 APBA3O96018 575 aa37.14■■■■□ 3.54
PGAM5-201ENST00000317555 FAM208AQ9UK61 1670 aaKnown RBP37.13■■■■□ 3.53
PGAM5-201ENST00000317555 CARD14Q9BXL6 1004 aa37.12■■■■□ 3.53
PGAM5-201ENST00000317555 SBF2Q86WG5 1849 aa37.12■■■■□ 3.53
PGAM5-201ENST00000317555 NSD3Q9BZ95 1437 aa37.11■■■■□ 3.53
PGAM5-201ENST00000317555 FBLN1P23142 703 aa37.11■■■■□ 3.53
PGAM5-201ENST00000317555 AMPHP49418 695 aa37.11■■■■□ 3.53
PGAM5-201ENST00000317555 POLR3GLQ9BT43 218 aa37.11■■■■□ 3.53
PGAM5-201ENST00000317555 EXOC5O00471 708 aa37.1■■■■□ 3.53
PGAM5-201ENST00000317555 HOXC9P31274 260 aa37.09■■■■□ 3.53
PGAM5-201ENST00000317555 EZH2Q15910 746 aaKnown RBP37.09■■■■□ 3.53
PGAM5-201ENST00000317555 MARCH10Q8NA82 808 aaPredicted RBP37.08■■■■□ 3.53
PGAM5-201ENST00000317555 SRCAPQ6ZRS2 3230 aa37.08■■■■□ 3.53
PGAM5-201ENST00000317555 TNS2Q63HR2 1409 aa37.08■■■■□ 3.53
PGAM5-201ENST00000317555 PARD3Q8TEW0 1356 aa37.07■■■■□ 3.53
PGAM5-201ENST00000317555 LTV1Q96GA3 475 aaPredicted RBP37.07■■■■□ 3.52
PGAM5-201ENST00000317555 CAMKK2Q96RR4 588 aa37.07■■■■□ 3.52
PGAM5-201ENST00000317555 RTL1A6NKG5 1358 aa37.06■■■■□ 3.52
PGAM5-201ENST00000317555 IL2RBP14784 551 aa37.06■■■■□ 3.52
PGAM5-201ENST00000317555 RRS1Q15050 365 aaKnown RBP37.04■■■■□ 3.52
PGAM5-201ENST00000317555 BCL9O00512 1426 aa37.03■■■■□ 3.52
PGAM5-201ENST00000317555 RREB1Q92766 1687 aa37■■■■□ 3.51
PGAM5-201ENST00000317555 CGNL1Q0VF96 1302 aa36.99■■■■□ 3.51
PGAM5-201ENST00000317555 RGPD2P0DJD1 1756 aa36.99■■■■□ 3.51
PGAM5-201ENST00000317555 BCL11BQ9C0K0 894 aaPredicted RBP36.97■■■■□ 3.51
PGAM5-201ENST00000317555 PSDA5PKW4 1024 aaPredicted RBP36.96■■■■□ 3.51
PGAM5-201ENST00000317555 RGPD3A6NKT7 1758 aaPredicted RBP36.94■■■■□ 3.5
PGAM5-201ENST00000317555 RGPD4Q7Z3J3 1758 aa36.94■■■■□ 3.5
PGAM5-201ENST00000317555 KIF24Q5T7B8 1368 aa36.94■■■■□ 3.5
PGAM5-201ENST00000317555 NUP188Q5SRE5 1749 aa36.94■■■■□ 3.5
PGAM5-201ENST00000317555 SMG6Q86US8 1419 aaKnown RBP36.93■■■■□ 3.5
PGAM5-201ENST00000317555 FLT4P35916 1363 aa36.92■■■■□ 3.5
PGAM5-201ENST00000317555 PTF1AQ7RTS3 328 aa36.9■■■■□ 3.5
PGAM5-201ENST00000317555 INSRP06213 1382 aa36.9■■■■□ 3.5
PGAM5-201ENST00000317555 PLSCR1O15162 318 aa36.89■■■■□ 3.5
PGAM5-201ENST00000317555 R3HDM1Q15032 1099 aaKnown RBP36.89■■■■□ 3.5
PGAM5-201ENST00000317555 ANKRD26Q9UPS8 1709 aa36.89■■■■□ 3.5
PGAM5-201ENST00000317555 HSP90AB2PQ58FF8 381 aa36.88■■■■□ 3.49
PGAM5-201ENST00000317555 KAT6BQ8WYB5 2073 aa36.87■■■■□ 3.49
PGAM5-201ENST00000317555 PANK3Q9H999 370 aa36.87■■■■□ 3.49
PGAM5-201ENST00000317555 MAP2P11137 1827 aaKnown RBP36.87■■■■□ 3.49
PGAM5-201ENST00000317555 NHSQ6T4R5 1651 aa36.86■■■■□ 3.49
PGAM5-201ENST00000317555 NBPF6Q5VWK0 638 aa36.85■■■■□ 3.49
PGAM5-201ENST00000317555 NBPF4Q96M43 638 aa36.85■■■■□ 3.49
PGAM5-201ENST00000317555 EMILIN1Q9Y6C2 1016 aa36.85■■■■□ 3.49
PGAM5-201ENST00000317555 NBPF14Q5TI25 921 aa36.83■■■■□ 3.49
PGAM5-201ENST00000317555 MEGF6O75095 1541 aa36.81■■■■□ 3.48
PGAM5-201ENST00000317555 KCNQ2O43526 872 aa36.81■■■■□ 3.48
PGAM5-201ENST00000317555 ACSBG1Q96GR2 724 aa36.81■■■■□ 3.48
PGAM5-201ENST00000317555 PPM1GO15355 546 aaPredicted RBP36.8■■■■□ 3.48
PGAM5-201ENST00000317555 USHBP1Q8N6Y0 703 aa36.8■■■■□ 3.48
PGAM5-201ENST00000317555 DDX54Q8TDD1 881 aaKnown RBP36.8■■■■□ 3.48
PGAM5-201ENST00000317555 LRP5O75197 1615 aa36.8■■■■□ 3.48
PGAM5-201ENST00000317555 SHANK3Q9BYB0 1731 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms